Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 3.0e-221 771.5 390 100.0
Dinv09093 Davidia involucrata HOM05D028709 ORTHO05D004433 1.7e-62 244.2 236 63.1
Dinv12576 Davidia involucrata HOM05D028709 ORTHO05D004433 1.7e-62 244.2 236 63.1
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-28 131.7 105 54.3
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-27 125.6 101 55.4
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-27 125.6 101 54.5
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-26 125.2 101 53.5
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-26 123.2 101 54.5
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 7.3e-26 122.5 101 54.5
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 9.5e-26 122.1 101 53.5
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-25 120.6 102 53.9
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-25 120.6 101 53.5
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-25 119.8 98 53.1
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-25 119.0 103 51.5
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 8.1e-25 119.0 101 52.5
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-24 118.6 101 52.5
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-24 118.6 99 53.5
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 1.4e-24 118.2 120 47.5
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-24 117.9 99 52.5
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 4.0e-24 116.7 100 49.0
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-24 116.3 103 50.5
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-24 116.3 103 50.5
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 5.2e-24 116.3 101 52.5
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-24 115.5 100 51.0
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-23 115.2 98 49.0
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-23 114.4 98 50.0
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-23 114.4 101 52.5
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-23 114.0 100 48.0
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-23 114.0 100 48.0
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-23 114.0 103 49.5
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-23 114.0 98 45.9
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 2.6e-23 114.0 100 51.0
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-23 113.2 101 49.5
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 7.5e-23 112.5 105 49.5
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 9.8e-23 112.1 95 51.6
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.7e-22 111.3 105 48.6
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-22 111.3 101 48.5
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-22 110.5 99 51.5
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 6.4e-22 109.4 98 46.9
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 8.3e-22 109.0 104 47.1
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.1e-21 108.6 105 47.6
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.1e-21 108.6 105 47.6
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.9e-21 107.8 105 47.6
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.6e-20 104.8 105 46.7
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 4.6e-20 103.2 84 56.0
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 6.0e-20 102.8 84 56.0
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-19 102.1 84 56.0
Dinv02022 Davidia involucrata HOM05D028709 ORTHO05D004433 1.3e-19 101.7 94 69.1
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-19 100.9 100 48.0
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 1.5e-18 98.2 88 47.7
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 4.3e-18 96.7 97 43.3
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 9.5e-18 95.5 83 51.8
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-18 95.5 82 54.9
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.2e-17 95.1 94 43.6
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 2.1e-17 94.4 82 52.4
Sopen11g022850 Solanum pennellii HOM05D000002 ORTHO05D004433 3.6e-17 93.6 114 36.0
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-17 93.2 79 54.4
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 6.2e-17 92.8 83 45.8
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 8.1e-17 92.4 83 50.6
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.8e-16 91.3 100 39.0
Glyma.01G070601 Glycine max HOM05D000002 ORTHO05D004433 2.3e-16 90.9 100 42.0
Nn1g06847 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.0e-16 90.1 101 43.6
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 5.2e-16 89.7 99 37.4
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 6.8e-16 89.4 123 36.6
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.8e-16 89.4 100 39.0
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 1.2e-15 88.6 81 49.4
Nn1g02075 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.0e-15 87.8 94 40.4
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 3.4e-15 87.0 81 50.6
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.4e-15 86.7 98 34.7
Dinv02177 Davidia involucrata HOM05D000002 ORTHO05D004433 7.6e-15 85.9 47 83.0
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 7.6e-15 85.9 109 33.9
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 7.6e-15 85.9 96 36.5
Nn3g20324 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.7e-14 84.7 94 39.4
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 1.7e-14 84.7 99 43.4
Gohir.D08G274150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 2.2e-14 84.3 98 38.8
Gorai.004G292700 Gossypium raimondii HOM05D000002 ORTHO05D004433 2.2e-14 84.3 98 38.8
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-14 84.0 77 54.5
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 3.8e-14 83.6 99 38.4
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.9e-14 83.2 94 37.2
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.4e-14 82.8 97 36.1
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 8.4e-14 82.4 76 47.4
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 1.1e-13 82.0 99 37.4
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 1.4e-13 81.6 81 46.9
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 1.4e-13 81.6 81 48.1
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 1.4e-13 81.6 99 38.4
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 1.9e-13 81.3 78 46.2
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 2.4e-13 80.9 75 54.7
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-13 80.9 78 50.0
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 3.2e-13 80.5 99 34.3
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 4.1e-13 80.1 98 36.7
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 9.2e-13 79.0 72 47.2
PGR044G1025 Punica granatum HOM05D000097 ORTHO05D000041 1.6e-12 78.2 103 38.8
Cpa.g.sc11.103 Carica papaya HOM05D000002 ORTHO05D004433 2.7e-12 77.4 91 34.1
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 2.7e-12 77.4 81 48.1
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.5e-12 77.0 83 37.3
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 3.5e-12 77.0 78 44.9
Gorai.012G076500 Gossypium raimondii HOM05D000002 ORTHO05D004433 7.8e-12 75.9 81 46.9
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 7.8e-12 75.9 78 48.7
PGR044G0355 Punica granatum HOM05D000097 ORTHO05D000041 7.8e-12 75.9 102 36.3
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 7.8e-12 75.9 99 37.4
PGSC0003DMG400033163 Solanum tuberosum HOM05D000002 ORTHO05D004433 7.8e-12 75.9 78 42.3
CAN.G401.9 Capsicum annuum HOM05D000002 ORTHO05D004433 1.0e-11 75.5 72 48.6
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.0e-11 75.5 97 32.0
Prupe.2G033500 Prunus persica HOM05D000002 ORTHO05D004433 1.0e-11 75.5 94 40.4
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.7e-11 74.7 100 37.0
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-11 74.7 99 36.4
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 3.0e-11 73.9 65 52.3
PGR044G1072 Punica granatum HOM05D000097 ORTHO05D000041 1.1e-10 72.0 96 37.5
CiPaw.08G098800 Carya illinoinensis HOM05D000002 ORTHO05D004433 1.5e-10 71.6 99 37.4
Oeu050054.1 Olea europaea HOM05D000002 ORTHO05D004433 1.5e-10 71.6 81 44.4
PGR044G1153 Punica granatum HOM05D000097 ORTHO05D000041 2.5e-10 70.9 96 37.5
VMungo1215G0344 Vigna mungo HOM05D000097 ORTHO05D000041 9.6e-10 68.9 109 33.9
PGSC0003DMG400023646 Solanum tuberosum HOM05D000002 ORTHO05D004433 1.2e-09 68.6 72 41.7
SHI22389 Sapria himalayana HOM05D000002 ORTHO05D004433 1.6e-09 68.2 79 44.3
Nn4g24889 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.1e-09 67.8 78 32.1
SEGI_17155 Sequoiadendron giganteum HOM05D000006 ORTHO05D003106 2.1e-09 67.8 92 34.8
ATR0049G043 Amborella trichopoda HOM05D000097 ORTHO05D000041 2.8e-09 67.4 78 39.7
QL05p063530 Quercus lobata HOM05D000002 ORTHO05D004433 2.8e-09 67.4 71 43.7
GSVIVG01011219001 Vitis vinifera HOM05D000097 ORTHO05D000041 2.8e-09 67.4 84 33.3
TPR.G19462 Trifolium pratense HOM05D000097 ORTHO05D000041 3.6e-09 67.0 88 35.2
TAR625G0793 Trochodendron aralioides HOM05D000097 ORTHO05D000041 8.1e-09 65.9 93 29.0
TPR.G40082 Trifolium pratense HOM05D000097 ORTHO05D009232 1.1e-08 65.5 93 33.3
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 1.4e-08 65.1 53 49.1
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.8e-08 64.7 61 45.9
Phvul.002G135000 Phaseolus vulgaris HOM05D000097 ORTHO05D000041 1.8e-08 64.7 99 33.3
Rhsim10G0149800 Rhododendron simsii HOM05D000097 ORTHO05D000041 3.1e-08 63.9 82 30.5
ATR0736G044 Amborella trichopoda HOM05D000097 ORTHO05D009673 4.0e-08 63.5 74 39.2
SHI09919 Sapria himalayana HOM05D000002 ORTHO05D004433 4.0e-08 63.5 68 45.6
Thecc.01G126000 Theobroma cacao HOM05D000097 ORTHO05D000041 4.0e-08 63.5 83 32.5
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-08 62.8 80 42.5
Glyma.01G013300 Glycine max HOM05D000097 ORTHO05D000041 6.9e-08 62.8 89 29.2
vmacro12855 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 6.9e-08 62.8 93 26.9
GSVIVG01011202001 Vitis vinifera HOM05D000097 ORTHO05D009232 8.9e-08 62.4 79 32.9
Lsat_1_v5_gn_4_123500 Lactuca sativa HOM05D000002 ORTHO05D004433 1.5e-07 61.6 72 44.4
PSO832G0397 Papaver somniferum HOM05D000097 ORTHO05D000041 1.5e-07 61.6 90 31.1
Rhsim10G0137700 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.0e-07 61.2 93 26.9
Thecc.03G106900 Theobroma cacao HOM05D000002 ORTHO05D004433 2.0e-07 61.2 77 32.5
FvH4_5g39631 Fragaria vesca HOM05D000002 ORTHO05D000047 2.6e-07 60.8 91 31.9
SHI47496 Sapria himalayana HOM05D000002 ORTHO05D004433 2.6e-07 60.8 49 49.0
FvH4_5g37090 Fragaria vesca HOM05D000097 ORTHO05D009232 3.4e-07 60.5 80 28.8
Gohir.D11G232880 Gossypium hirsutum HOM05D000097 ORTHO05D000041 3.4e-07 60.5 86 32.6
Psat2g139360 Pisum sativum HOM05D000097 ORTHO05D000041 3.4e-07 60.5 88 30.7
CAN.G350.7 Capsicum annuum HOM05D000002 ORTHO05D004433 4.4e-07 60.1 68 36.8
FvH4_5g19322 Fragaria vesca HOM05D000097 ORTHO05D009232 4.4e-07 60.1 85 29.4
Lj4A850G25 Lonicera japonica HOM05D000097 ORTHO05D000041 4.4e-07 60.1 105 29.5
Nn8g39618 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.4e-07 60.1 73 39.7
Sopen05g013900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-07 60.1 59 45.8
FvH4_2g27292 Fragaria vesca HOM05D000002 ORTHO05D000047 5.8e-07 59.7 95 33.7
FAN04G1975 Fragaria x ananassa HOM05D001790 ORTHO05D007425 5.8e-07 59.7 102 28.4
GSVIVG01011204001 Vitis vinifera HOM05D000097 ORTHO05D000041 5.8e-07 59.7 79 31.6
Dinv11316 Davidia involucrata HOM05D000097 ORTHO05D000041 7.6e-07 59.3 91 29.7
SHI39435 Sapria himalayana HOM05D000002 ORTHO05D004433 7.6e-07 59.3 45 53.3
SHI39437 Sapria himalayana HOM05D000002 ORTHO05D004433 7.6e-07 59.3 45 53.3
GSVIVG01011216001 Vitis vinifera HOM05D000097 ORTHO05D000041 7.6e-07 59.3 79 30.4
GSVIVG01026533001 Vitis vinifera HOM05D000097 ORTHO05D000041 7.6e-07 59.3 92 30.4
FAN04G1606 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.3e-06 58.5 100 28.0
FAN08G0420 Fragaria x ananassa HOM05D000097 ORTHO05D009232 1.3e-06 58.5 80 28.8
Oeu044111.2 Olea europaea HOM05D000097 ORTHO05D000041 1.3e-06 58.5 79 29.1
Rhsim10G0137400 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.3e-06 58.5 93 26.9
vmacro12856 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 1.3e-06 58.5 92 27.2
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-06 58.2 56 44.6
Oeu051241.1 Olea europaea HOM05D000002 ORTHO05D004433 1.7e-06 58.2 70 44.3
Rhsim10G0137600 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.7e-06 58.2 93 26.9
TWI15G0201 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 1.7e-06 58.2 85 30.6
Thecc.03G017100 Theobroma cacao HOM05D000097 ORTHO05D000041 2.2e-06 57.8 81 30.9
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.9e-06 57.4 97 33.0
COL.COLO4_14009 Corchorus olitorius HOM05D000097 ORTHO05D000041 4.9e-06 56.6 83 32.5
Sopen12g018200 Solanum pennellii HOM05D000014 ORTHO05D004433 6.4e-06 56.2 41 56.1
Actinidia09829 Actinidia chinensis HOM05D000097 ORTHO05D000041 8.4e-06 55.8 83 27.7
AagrBONN_evm.TU.Sc2ySwM_340.2074 Anthoceros agrestis HOM05D000002 ORTHO05D000001 8.4e-06 55.8 96 27.1
FvH4_3g18164 Fragaria vesca HOM05D010501 ORTHO05D000047 8.4e-06 55.8 99 29.3
FAN18G2502 Fragaria x ananassa HOM05D000097 ORTHO05D000041 8.4e-06 55.8 81 29.6


User provided reference genes

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