Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01947 Davidia involucrata HOM05D010146 ORTHO05D000385 7.8e-64 246.9 119 100.0
Dinv08948 Davidia involucrata HOM05D010146 ORTHO05D000385 1.8e-36 156.0 86 87.2
Dinv14723 Davidia involucrata HOM05D010146 ORTHO05D000385 1.8e-36 156.0 86 87.2
Dinv12592 Davidia involucrata HOM05D010146 ORTHO05D000385 6.9e-36 154.1 97 78.4
Dinv04329 Davidia involucrata HOM05D010146 ORTHO05D000385 9.0e-36 153.7 86 86.0
Dinv11732 Davidia involucrata HOM05D010146 ORTHO05D000385 9.0e-36 153.7 86 86.0
Dinv15672 Davidia involucrata HOM05D010146 ORTHO05D000385 9.0e-36 153.7 86 86.0
Dinv12401 Davidia involucrata HOM05D010146 ORTHO05D000385 4.5e-35 151.4 97 78.4
Dinv04171 Davidia involucrata HOM05D010146 ORTHO05D000385 1.3e-34 149.8 86 86.0
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 2.2e-34 149.1 86 86.0
Dinv19999 Davidia involucrata HOM05D010146 ORTHO05D000385 5.1e-31 137.9 86 81.4
Dinv01725 Davidia involucrata HOM05D010146 ORTHO05D000385 2.5e-17 92.4 86 58.1
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.1e-14 83.6 89 48.3
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.7e-14 80.5 89 46.1
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 3.7e-13 78.6 92 46.7
vmacro00652 Vaccinium macrocarpon HOM05D001309 ORTHO05D000385 8.2e-13 77.4 90 47.8
MBI06_g41780_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-12 75.9 83 48.2
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.2e-11 73.6 88 43.2
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.3e-10 70.1 89 43.8
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-10 70.1 83 43.4
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.7e-10 69.7 88 42.0
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.7e-10 69.7 88 40.9
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.7e-10 69.7 88 42.0
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 1.7e-10 69.7 88 42.0
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 2.2e-10 69.3 88 40.9
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 2.2e-10 69.3 93 41.9
PGR083G0420 Punica granatum HOM05D001309 ORTHO05D000385 5.0e-10 68.2 80 45.0
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 1.1e-09 67.0 86 44.2
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 1.9e-09 66.2 88 42.0
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.5e-09 64.7 88 42.0
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 9.4e-09 63.9 87 42.5
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.4e-09 63.9 83 41.0
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-08 63.5 83 42.2
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.2e-08 63.5 87 40.2
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.1e-08 62.8 83 41.0
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 2.7e-08 62.4 86 43.0
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 3.6e-08 62.0 107 36.4
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.6e-08 62.0 83 41.0
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 4.7e-08 61.6 87 41.4
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.7e-08 61.6 85 41.2
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 4.7e-08 61.6 87 41.4
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.7e-08 61.6 86 39.5
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 6.1e-08 61.2 87 39.1
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.1e-08 61.2 87 39.1
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.1e-08 61.2 87 39.1
EL10Ac2g03126 Beta vulgaris HOM05D008595 ORTHO05D010945 7.9e-08 60.8 81 39.5
Dinv03145 Davidia involucrata HOM05D010146 ORTHO05D000385 7.9e-08 60.8 33 84.8
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.4e-07 60.1 88 42.0
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 1.4e-07 60.1 86 43.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.4e-07 60.1 85 42.4
EL10Ac3g06466 Beta vulgaris HOM05D008595 ORTHO05D010945 1.8e-07 59.7 77 40.3
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-07 59.7 86 37.2
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.8e-07 59.7 88 44.3
EL10Ac8g18984 Beta vulgaris HOM05D010065 ORTHO05D000385 2.3e-07 59.3 80 40.0
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.3e-07 59.3 87 41.4
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-07 59.3 86 38.4
Prupe.7G105300 Prunus persica HOM05D005763 ORTHO05D005970 2.3e-07 59.3 83 37.3
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.3e-07 59.3 86 39.5
EL10Ac5g11789 Beta vulgaris HOM05D008595 ORTHO05D010945 3.0e-07 58.9 81 38.3
EL10Ac5g11888 Beta vulgaris HOM05D008595 ORTHO05D009929 3.0e-07 58.9 81 38.3
EL10Ac6g14350 Beta vulgaris HOM05D008595 ORTHO05D010945 3.0e-07 58.9 81 38.3
EL10Ac6g14473 Beta vulgaris HOM05D008595 ORTHO05D010945 3.0e-07 58.9 81 38.3
EL10Ac7g16685 Beta vulgaris HOM05D008595 ORTHO05D010945 3.0e-07 58.9 81 38.3
EL10Ac8g20153 Beta vulgaris HOM05D008595 ORTHO05D010945 3.0e-07 58.9 81 38.3
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-07 58.9 86 41.9
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.0e-07 58.9 76 44.7
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.0e-07 58.9 83 39.8
AUR62035501 Chenopodium quinoa HOM05D008595 ORTHO05D010945 3.9e-07 58.5 81 40.7
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.9e-07 58.5 87 37.9
EL10Ac5g11817 Beta vulgaris HOM05D008595 ORTHO05D010945 5.1e-07 58.2 80 37.5
Rhsim01G0178700 Rhododendron simsii HOM05D001309 ORTHO05D000385 5.1e-07 58.2 84 38.1
EL10Ac3g06761 Beta vulgaris HOM05D008595 ORTHO05D010945 6.7e-07 57.8 81 38.3
EL10Ac3g06763 Beta vulgaris HOM05D008595 ORTHO05D010945 6.7e-07 57.8 81 38.3
EL10Ac5g11348 Beta vulgaris HOM05D008595 ORTHO05D010945 6.7e-07 57.8 80 38.8
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 6.7e-07 57.8 87 39.1
EL10Ac5g11175 Beta vulgaris HOM05D008595 ORTHO05D010945 8.8e-07 57.4 80 37.5
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 8.8e-07 57.4 81 38.3
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 8.8e-07 57.4 105 32.4
MD02G1315300 Malus domestica HOM05D008315 ORTHO05D009452 8.8e-07 57.4 80 37.5
Nn4g24072 Nelumbo nucifera HOM05D001309 ORTHO05D000385 8.8e-07 57.4 85 41.2
Nn7g37991 Nelumbo nucifera HOM05D001309 ORTHO05D000385 8.8e-07 57.4 86 38.4
RcHm_v2.0_Chr7g0237841 Rosa chinensis HOM05D009706 ORTHO05D009452 8.8e-07 57.4 82 37.8
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 1.5e-06 56.6 87 41.4
MBI13_g31587_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.0e-06 56.2 81 38.3
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-06 56.2 83 37.3
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-06 56.2 83 39.8
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.0e-06 56.2 87 36.8
EL10Ac1g02242 Beta vulgaris HOM05D008595 ORTHO05D010945 2.6e-06 55.8 80 36.2
EL10Ac5g10887 Beta vulgaris HOM05D008595 ORTHO05D010945 2.6e-06 55.8 81 38.3
EL10Ac5g11498 Beta vulgaris HOM05D008595 ORTHO05D010945 2.6e-06 55.8 81 37.0
EL10Ac9g20807 Beta vulgaris HOM05D004615 ORTHO05D000385 2.6e-06 55.8 81 35.8
ECA234G0887 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.6e-06 55.8 75 41.3
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 2.6e-06 55.8 87 36.8
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-06 55.8 91 37.4
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 2.6e-06 55.8 90 37.8
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-06 55.8 86 38.4
EL10Ac9g20868 Beta vulgaris HOM05D008595 ORTHO05D010945 3.3e-06 55.5 77 37.7
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.3e-06 55.5 87 36.8
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-06 55.1 83 36.1
Nitab4.5_0008635g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-06 55.1 83 37.3
EL10Ac1g01792 Beta vulgaris HOM05D008595 ORTHO05D010945 5.7e-06 54.7 81 38.3
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.7e-06 54.7 90 36.7
EL10Ac5g11465 Beta vulgaris HOM05D008595 ORTHO05D010945 9.7e-06 53.9 81 35.8
Nitab4.5_0002263g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.7e-06 53.9 83 38.6


User provided reference genes

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