Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 3.4e-83 311.6 158 100.0
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.4e-55 219.9 160 74.4
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 3.0e-55 218.8 160 73.8
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 2.0e-54 216.1 159 71.1
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 3.3e-54 215.3 158 71.5
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 1.7e-53 213.0 160 69.4
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 3.7e-53 211.8 156 71.8
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 4.8e-53 211.5 159 69.8
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 1.4e-52 209.9 160 69.4
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 3.5e-51 205.3 162 67.3
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 5.9e-51 204.5 162 70.4
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 1.3e-50 203.4 138 76.1
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 2.2e-50 202.6 160 65.6
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 3.8e-50 201.8 159 69.8
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 5.0e-50 201.4 158 67.7
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 1.5e-49 199.9 163 68.1
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 2.5e-49 199.1 160 66.2
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 2.5e-49 199.1 158 65.2
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 9.4e-49 197.2 154 64.9
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 1.2e-48 196.8 153 68.0
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 1.6e-48 196.4 161 67.7
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 2.1e-48 196.1 158 66.5
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 6.1e-48 194.5 158 67.7
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 1.0e-47 193.7 156 64.7
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.8e-47 193.0 140 70.0
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 2.3e-47 192.6 163 65.0
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 3.0e-47 192.2 160 65.0
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 4.0e-47 191.8 158 66.5
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 5.2e-47 191.4 165 61.2
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 8.8e-47 190.7 162 64.2
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 2.0e-46 189.5 160 63.1
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 2.6e-46 189.1 164 64.0
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 2.6e-46 189.1 163 64.4
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 2.6e-46 189.1 162 64.8
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 2.6e-46 189.1 162 64.8
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 3.4e-46 188.7 156 60.9
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 3.4e-46 188.7 158 64.6
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 3.4e-46 188.7 162 64.8
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 4.4e-46 188.3 164 62.2
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 7.5e-46 187.6 139 68.3
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 1.7e-45 186.4 166 62.0
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.8e-45 185.7 156 62.2
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 3.7e-45 185.3 126 73.0
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.8e-44 183.0 158 63.9
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 1.8e-44 183.0 124 71.8
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 1.8e-44 183.0 158 57.6
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 2.4e-44 182.6 158 61.4
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 7.0e-44 181.0 155 61.9
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 7.0e-44 181.0 166 60.8
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 7.0e-44 181.0 155 63.9
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 7.0e-44 181.0 136 66.9
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.2e-43 180.3 122 71.3
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 3.5e-43 178.7 144 63.2
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 4.5e-43 178.3 181 58.0
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 5.9e-43 177.9 130 68.5
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 7.7e-43 177.6 123 71.5
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 7.7e-43 177.6 153 60.1
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 1.0e-42 177.2 123 69.9
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 2.2e-42 176.0 158 62.0
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 2.2e-42 176.0 139 64.0
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 2.9e-42 175.6 138 66.7
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 3.8e-42 175.3 125 70.4
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 3.8e-42 175.3 167 60.5
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 6.5e-42 174.5 123 70.7
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 8.5e-42 174.1 122 71.3
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 8.5e-42 174.1 153 58.8
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 8.5e-42 174.1 153 58.8
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 8.5e-42 174.1 121 71.1
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 1.1e-41 173.7 152 60.5
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 1.1e-41 173.7 122 69.7
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.1e-41 173.7 122 70.5
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 1.5e-41 173.3 158 56.3
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 1.9e-41 172.9 121 66.9
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 2.5e-41 172.6 126 67.5
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 3.2e-41 172.2 162 59.9
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 9.5e-41 170.6 122 68.9
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 1.2e-40 170.2 121 65.3
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.6e-40 169.9 168 56.5
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 2.1e-40 169.5 158 58.9
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 8.0e-40 167.5 157 61.8
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.8e-39 166.4 122 64.8
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 2.6e-38 162.5 175 54.9
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 2.6e-38 162.5 175 54.9
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 3.4e-38 162.2 175 54.9
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 3.4e-38 162.2 175 54.9
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 4.9e-37 158.3 105 68.6
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 8.3e-37 157.5 103 74.8
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 1.1e-36 157.1 159 54.7
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 4.1e-36 155.2 122 62.3
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.1e-36 155.2 119 66.4
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.7e-35 152.5 128 60.9
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 7.7e-35 151.0 121 61.2
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 1.0e-34 150.6 139 59.7
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.2e-32 143.7 110 65.5
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 2.1e-32 142.9 104 67.3
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 2.8e-32 142.5 87 77.0
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 6.1e-32 141.4 113 63.7
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 2.3e-31 139.4 96 67.7
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 4.0e-31 138.7 119 58.0
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.3e-29 133.7 116 58.6
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 8.3e-29 131.0 108 59.3
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 7.0e-28 127.9 117 57.3
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 9.2e-28 127.5 133 57.1
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 7.3e-25 117.9 74 70.3
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 2.0e-19 99.8 97 57.7
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 1.0e-18 97.4 99 46.5
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 1.2e-11 73.9 86 46.5
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 3.0e-10 69.3 64 51.6
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 6.6e-10 68.2 133 27.1
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 6.6e-10 68.2 97 37.1
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 9.5e-09 64.3 106 35.8


User provided reference genes

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