Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01781 Davidia involucrata HOM05D000452 ORTHO05D005748 5.4e-133 477.6 235 100.0
Dinv02128 Davidia involucrata HOM05D000452 ORTHO05D005748 7.3e-122 440.7 224 95.5
Hma1.2p1_0307F.1_g119780 Hydrangea macrophylla HOM05D000452 ORTHO05D005748 4.9e-102 374.8 199 88.9
CSS0006947 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D005748 3.6e-97 358.6 201 83.1
Actinidia03722 Actinidia chinensis HOM05D000452 ORTHO05D005748 3.8e-94 348.6 203 82.8
GSVIVG01025200001 Vitis vinifera HOM05D000452 ORTHO05D005748 1.0e-91 340.5 203 78.8
Haze_23811 Corylus avellana HOM05D000452 ORTHO05D005748 2.5e-90 335.9 219 72.1
TAR636G2205 Trochodendron aralioides HOM05D000452 ORTHO05D005748 2.5e-90 335.9 206 77.2
CiPaw.13G114400 Carya illinoinensis HOM05D000452 ORTHO05D005748 1.1e-88 330.5 221 71.9
Rhsim13G0095000 Rhododendron simsii HOM05D000452 ORTHO05D005748 3.1e-88 328.9 196 80.1
Prupe.6G103100 Prunus persica HOM05D000452 ORTHO05D005748 1.2e-87 327.0 205 75.6
MD03G1119900 Malus domestica HOM05D000452 ORTHO05D005748 1.3e-86 323.6 196 78.1
TAR633G0246 Trochodendron aralioides HOM05D000452 ORTHO05D005748 1.3e-86 323.6 215 74.0
Cfa011305 Carpinus fangiana HOM05D000452 ORTHO05D005748 1.9e-85 319.7 193 76.7
Cc01_g11000 Coffea canephora HOM05D000452 ORTHO05D005748 1.9e-85 319.7 205 73.2
MD11G1137500 Malus domestica HOM05D000452 ORTHO05D005748 1.9e-85 319.7 213 71.8
Lj1C203G7 Lonicera japonica HOM05D000452 ORTHO05D005748 5.5e-85 318.2 196 77.6
Thecc.09G342400 Theobroma cacao HOM05D000452 ORTHO05D005748 7.1e-85 317.8 196 77.0
Eucgr.B02508 Eucalyptus grandis HOM05D000452 ORTHO05D005748 9.3e-85 317.4 195 76.9
TWI79G0017 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 1.2e-84 317.0 207 71.5
Nn2g10818 Nelumbo nucifera HOM05D000452 ORTHO05D005748 1.6e-84 316.6 200 73.5
FvH4_3g31960 Fragaria vesca HOM05D000452 ORTHO05D005748 2.7e-84 315.8 207 72.9
FAN21G3667 Fragaria x ananassa HOM05D000452 ORTHO05D005748 2.7e-84 315.8 207 72.9
RcHm_v2.0_Chr5g0058721 Rosa chinensis HOM05D000452 ORTHO05D005748 2.7e-84 315.8 208 73.1
FAN25G3410 Fragaria x ananassa HOM05D000452 ORTHO05D005748 3.5e-84 315.5 211 72.0
Gorai.003G142700 Gossypium raimondii HOM05D000452 ORTHO05D005748 4.6e-84 315.1 206 72.8
FAN11G0834 Fragaria x ananassa HOM05D000452 ORTHO05D005748 7.9e-84 314.3 207 72.5
Gohir.D03G135600 Gossypium hirsutum HOM05D000452 ORTHO05D005748 1.0e-83 313.9 206 72.3
Manes.04G019700 Manihot esculenta HOM05D000452 ORTHO05D005748 1.3e-83 313.5 207 70.5
Gohir.A03G032800 Gossypium hirsutum HOM05D000452 ORTHO05D005748 1.8e-83 313.2 206 72.3
Lalb_Chr01g0004351 Lupinus albus HOM05D000452 ORTHO05D005748 3.0e-83 312.4 197 76.1
Nitab4.5_0005742g0010 Nicotiana tabacum HOM05D000452 ORTHO05D005748 3.0e-83 312.4 210 71.9
TWI31G0927 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 3.0e-83 312.4 206 71.8
Lj2C1024T12 Lonicera japonica HOM05D000452 ORTHO05D005748 3.9e-83 312.0 196 73.0
vmacro03204 Vaccinium macrocarpon HOM05D000452 ORTHO05D005748 3.9e-83 312.0 185 78.4
Peaxi162Scf00270g00311 Petunia axillaris HOM05D000452 ORTHO05D005748 5.1e-83 311.6 210 71.9
Nitab4.5_0000602g0100 Nicotiana tabacum HOM05D000452 ORTHO05D005748 6.7e-83 311.2 215 70.7
AUR62024960 Chenopodium quinoa HOM05D000452 ORTHO05D005748 1.1e-82 310.5 196 74.0
Ca_19270_v3 Cicer arietinum L. HOM05D000452 ORTHO05D005748 1.5e-82 310.1 199 73.4
PSO339G2396 Papaver somniferum HOM05D000452 ORTHO05D005748 1.5e-82 310.1 189 76.7
QL01p021907 Quercus lobata HOM05D000452 ORTHO05D005748 1.5e-82 310.1 190 74.2
Sc06g0010310 Simmondsia chinensis HOM05D000452 ORTHO05D005748 3.3e-82 308.9 213 68.1
Cpa.g.sc279.1 Carica papaya HOM05D000452 ORTHO05D005748 5.6e-82 308.1 200 75.0
Solyc11g069520.2 Solanum lycopersicum HOM05D000452 ORTHO05D005748 1.3e-81 307.0 200 74.5
Potri.009G011400 Populus trichocarpa HOM05D000452 ORTHO05D005748 2.1e-81 306.2 219 67.6
PGR102G2372 Punica granatum HOM05D000452 ORTHO05D005748 2.8e-81 305.8 197 73.1
Sopen11g028230 Solanum pennellii HOM05D000452 ORTHO05D005748 2.8e-81 305.8 194 75.8
PGSC0003DMG400008083 Solanum tuberosum HOM05D000452 ORTHO05D005748 2.8e-81 305.8 194 75.8
Lj3g0027876 Lotus japonicus HOM05D000452 ORTHO05D005748 3.7e-81 305.4 198 76.3
CANSAT54G2994 Cannabis sativa HOM05D000452 ORTHO05D005748 4.8e-81 305.1 196 72.4
Glyma.11G145300 Glycine max HOM05D000452 ORTHO05D005748 4.8e-81 305.1 198 75.8
COL.COLO4_18319 Corchorus olitorius HOM05D000452 ORTHO05D002419 8.1e-81 304.3 178 79.2
Lalb_Chr19g0137171 Lupinus albus HOM05D000452 ORTHO05D005748 8.1e-81 304.3 199 73.9
AUR62042196 Chenopodium quinoa HOM05D000452 ORTHO05D005748 1.1e-80 303.9 196 72.4
VMungo1127G0723 Vigna mungo HOM05D000452 ORTHO05D005748 1.8e-80 303.1 218 70.2
TPR.G6153 Trifolium pratense HOM05D000452 ORTHO05D005748 5.3e-80 301.6 215 68.4
Psat7g192440 Pisum sativum HOM05D000452 ORTHO05D005748 1.2e-79 300.4 197 72.1
EL10Ac9g22533 Beta vulgaris HOM05D000452 ORTHO05D005748 2.0e-79 299.7 180 76.7
Migut.D02233 Erythranthe guttata HOM05D000452 ORTHO05D005748 7.6e-79 297.7 194 72.7
Phvul.011G080300 Phaseolus vulgaris HOM05D000452 ORTHO05D005748 1.3e-78 297.0 198 73.7
Atru.chr3.3611 Acer truncatum HOM05D000452 ORTHO05D005748 1.7e-78 296.6 163 85.9
arahy.Tifrunner.gnm1.ann1.AXM315 Arachis hypogaea HOM05D000452 ORTHO05D005748 1.7e-78 296.6 217 69.1
Medtr4g058890 Medicago truncatula HOM05D000452 ORTHO05D005748 2.2e-78 296.2 197 72.1
arahy.Tifrunner.gnm1.ann1.I1PATR Arachis hypogaea HOM05D000452 ORTHO05D005748 3.8e-78 295.4 216 67.1
ECA248G3240 Erigeron canadensis HOM05D000452 ORTHO05D005748 3.8e-78 295.4 206 67.5
SGA_v2.0_scaffold180G39657 Striga asiatica HOM05D000452 ORTHO05D005748 3.8e-78 295.4 192 71.9
PSO339G5930 Papaver somniferum HOM05D000452 ORTHO05D005748 1.1e-77 293.9 196 72.4
arahy.Tifrunner.gnm1.ann1.S7ZFT4 Arachis hypogaea HOM05D000452 ORTHO05D005748 2.5e-77 292.7 215 67.0
DCAR_022745 Daucus carota HOM05D000452 ORTHO05D005748 4.2e-77 292.0 184 72.3
PSO384G2013 Papaver somniferum HOM05D000452 ORTHO05D005748 5.5e-77 291.6 196 71.4
MSTRG.21118 Avicennia marina HOM05D000452 ORTHO05D005748 1.2e-76 290.4 197 69.0
HanXRQChr07g0195801 Helianthus annuus HOM05D000452 ORTHO05D005748 1.6e-76 290.0 196 70.4
Aqoxy1G01223 Aquilegia oxysepala HOM05D000452 ORTHO05D005748 2.7e-76 289.3 189 70.9
Lsat_1_v5_gn_1_64080 Lactuca sativa HOM05D000452 ORTHO05D005748 2.7e-76 289.3 176 75.0
HanXRQChr01g0019321 Helianthus annuus HOM05D000452 ORTHO05D005748 3.5e-76 288.9 190 70.0
Oeu030194.1 Olea europaea HOM05D000452 ORTHO05D005748 4.6e-76 288.5 199 68.8
Lsat_1_v5_gn_2_91861 Lactuca sativa HOM05D000452 ORTHO05D005748 7.9e-76 287.7 198 67.2
Sed0009159 Sechium edule HOM05D000452 ORTHO05D005748 3.0e-75 285.8 200 67.0
MELO3C004897.2 Cucumis melo HOM05D000452 ORTHO05D005748 3.9e-75 285.4 206 65.5
CDE02G3238 Ceratophyllum demersum HOM05D000452 ORTHO05D005748 1.9e-74 283.1 194 69.6
ClCG01G013590 Citrullus lanatus HOM05D000452 ORTHO05D005748 1.9e-74 283.1 184 70.7
arahy.Tifrunner.gnm1.ann1.WEDN33 Arachis hypogaea HOM05D000452 ORTHO05D005748 2.5e-74 282.7 201 69.2
CsaV3_1G013960 Cucumis sativus L. HOM05D000452 ORTHO05D005748 5.7e-74 281.6 184 70.1
Ciclev10028288m.g Citrus clementina HOM05D000452 ORTHO05D005748 2.8e-73 279.3 192 66.1
Oeu014003.1 Olea europaea HOM05D000452 ORTHO05D005748 1.1e-72 277.3 188 68.6
HPP92_008616 Vanilla planifolia HOM05D000452 ORTHO05D005748 1.1e-72 277.3 201 64.7
Os06g0158200 Oryza sativa ssp. japonica HOM05D000452 ORTHO05D005748 1.3e-70 270.4 193 67.9
CsaV3_1G013970 Cucumis sativus L. HOM05D000452 ORTHO05D005748 3.8e-70 268.9 206 60.7
Oeu037301.1 Olea europaea HOM05D000452 ORTHO05D005748 8.4e-70 267.7 200 64.5
CsaV3_1G013990 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.1e-69 267.3 206 60.7
ECA238G2818 Erigeron canadensis HOM05D000452 ORTHO05D005748 1.9e-69 266.5 197 66.0
CARHR007800 Cardamine hirsuta HOM05D000452 ORTHO05D005748 7.2e-69 264.6 198 66.2
THA.LOC104826371 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 2.7e-68 262.7 197 65.0
Zm00001eb271200 Zea mays HOM05D000452 ORTHO05D005748 2.7e-68 262.7 195 65.6
Zm00001eb376480 Zea mays HOM05D000452 ORTHO05D005748 4.6e-68 261.9 187 66.8
AT1G08030 Arabidopsis thaliana HOM05D000452 ORTHO05D005748 1.8e-67 260.0 198 64.6
Sp1g06650 Schrenkiella parvula HOM05D000452 ORTHO05D005748 2.3e-67 259.6 198 64.1
AL1G18360 Arabidopsis lyrata HOM05D000452 ORTHO05D005748 3.0e-67 259.2 198 64.6
BcaB02g06693 Brassica carinata HOM05D000452 ORTHO05D005748 3.0e-67 259.2 200 64.5
Thhalv10007441m.g Eutrema salsugineum HOM05D000452 ORTHO05D005748 3.0e-67 259.2 198 64.6
RhsimUnG0046400 Rhododendron simsii HOM05D000452 ORTHO05D005748 5.1e-67 258.5 181 71.8
THA.LOC104800598 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 6.7e-67 258.1 193 66.8
BraA06t23716Z Brassica rapa HOM05D000452 ORTHO05D005748 1.9e-66 256.5 191 66.0
BcaB03g13356 Brassica carinata HOM05D000452 ORTHO05D005748 3.3e-66 255.8 187 64.7
BcaC05g24718 Brassica carinata HOM05D000452 ORTHO05D005748 4.3e-66 255.4 199 63.8
A06p05090 Brassica napus HOM05D000452 ORTHO05D005748 4.3e-66 255.4 191 65.4
C05p06050 Brassica napus HOM05D000452 ORTHO05D005748 4.3e-66 255.4 199 63.8
BolC5t29365H Brassica oleracea HOM05D000452 ORTHO05D005748 4.3e-66 255.4 199 63.8
BraA08t35443Z Brassica rapa HOM05D000452 ORTHO05D005748 1.4e-64 250.4 190 64.2
Carub.0001s0737 Capsella rubella HOM05D000452 ORTHO05D005748 1.4e-64 250.4 173 68.2
A08p35370 Brassica napus HOM05D000452 ORTHO05D005748 1.8e-64 250.0 190 63.7
C08p03470 Brassica napus HOM05D000452 ORTHO05D005748 9.0e-64 247.7 202 59.9
Lsat_1_v5_gn_9_37660 Lactuca sativa HOM05D000452 ORTHO05D005748 9.0e-64 247.7 201 60.2
BolC8t47149H Brassica oleracea HOM05D000452 ORTHO05D005748 1.2e-63 247.3 183 63.9
SEGI_04235 Sequoiadendron giganteum HOM05D000452 ORTHO05D005748 1.3e-62 243.8 191 60.7
Peaxi162Scf00034g00107 Petunia axillaris HOM05D000452 ORTHO05D005748 3.8e-62 242.3 194 62.4
unitig_736.g22410 Utricularia gibba HOM05D000452 ORTHO05D005748 1.1e-61 240.7 191 61.8
SHI19559 Sapria himalayana HOM05D000452 ORTHO05D005748 2.3e-59 233.0 190 57.9
Aa31sc122G10 Aethionema arabicum HOM05D000452 ORTHO05D005748 1.1e-58 230.7 161 70.2
Lsat_1_v5_gn_5_88800 Lactuca sativa HOM05D000452 ORTHO05D005748 1.4e-56 223.8 197 56.9
CiPaw.14G081900 Carya illinoinensis HOM05D000452 ORTHO05D005748 3.1e-56 222.6 208 54.3
ATR0048G028 Amborella trichopoda HOM05D000452 ORTHO05D005748 1.2e-55 220.7 126 80.2
Lsat_1_v5_gn_2_100281 Lactuca sativa HOM05D000452 ORTHO05D005748 3.3e-50 202.6 124 76.6
Mapoly0061s0093 Marchantia polymorpha HOM05D000452 ORTHO05D005748 2.6e-47 193.0 182 54.4
MBI07_g26020_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 4.2e-45 185.7 110 78.2
AagrBONN_evm.TU.Sc2ySwM_117.3844 Anthoceros agrestis HOM05D000452 ORTHO05D005748 9.4e-45 184.5 196 51.0
Pp3c16_24250 Physcomitrium patens HOM05D000452 ORTHO05D005748 1.8e-43 180.3 183 50.8
SMO134G0053 Selaginella moellendorffii HOM05D000452 ORTHO05D005748 1.1e-40 171.0 196 47.4
PSO063G2649 Papaver somniferum HOM05D000452 ORTHO05D005748 1.6e-39 167.2 90 85.6
CsaV3_1G013980 Cucumis sativus L. HOM05D000452 ORTHO05D005748 2.1e-36 156.8 145 54.5
Lsat_1_v5_gn_3_50740 Lactuca sativa HOM05D000452 ORTHO05D005748 1.4e-35 154.1 122 63.1
CBR_g51944 Chara braunii HOM05D000452 ORTHO05D005748 2.0e-34 150.2 217 38.7
SalBow3G4114 Salvia bowleyana HOM05D000452 ORTHO05D005748 2.0e-31 140.2 86 74.4
Oeu001281.1 Olea europaea HOM05D000452 ORTHO05D005748 1.9e-29 133.7 82 78.0
DCAR_018802 Daucus carota HOM05D000452 ORTHO05D005748 3.0e-27 126.3 96 57.3
Hund08166 Selenicereus undatus HOM05D000452 ORTHO05D005748 6.8e-27 125.2 100 59.0
Cre01.g022600 Chlamydomonas reinhardtii HOM05D000452 ORTHO05D005748 1.3e-25 120.9 141 41.8
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 4.5e-23 112.5 84 61.9
TPR.G26833 Trifolium pratense HOM05D000452 ORTHO05D005748 2.5e-21 106.7 60 83.3
Hund08167 Selenicereus undatus HOM05D000452 ORTHO05D005748 1.0e-19 101.3 50 90.0
PRCOL_00001963 Prasinoderma coloniale HOM05D000452 ORTHO05D005748 3.0e-19 99.8 146 36.3
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 4.6e-15 85.9 67 59.7
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 5.0e-14 82.4 64 59.4
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 2.5e-13 80.1 64 57.8
Lsat_1_v5_gn_4_22460 Lactuca sativa HOM05D000344 ORTHO05D005714 2.5e-13 80.1 57 71.9
C07p54990 Brassica napus HOM05D000452 ORTHO05D005748 1.7e-09 67.4 46 65.2
MD11G1150200 Malus domestica HOM05D000452 ORTHO05D005748 3.7e-09 66.2 34 82.4


User provided reference genes

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