Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01749 Davidia involucrata HOM05D003691 ORTHO05D004288 4.4e-77 291.2 146 100.0
Dinv18681 Davidia involucrata HOM05D003691 ORTHO05D004288 6.1e-34 147.9 77 94.8
Dinv17119 Davidia involucrata HOM05D003691 ORTHO05D004288 3.2e-19 99.0 49 95.9
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 1.2e-18 97.1 47 95.7
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 4.1e-14 82.0 46 80.4
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 7.0e-14 81.3 52 71.2
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 7.0e-14 81.3 47 80.9
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 1.2e-13 80.5 47 72.3
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 1.6e-13 80.1 52 69.2
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 2.6e-13 79.3 47 74.5
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 4.5e-13 78.6 52 67.3
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 7.7e-13 77.8 52 67.3
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 1.3e-12 77.0 52 67.3
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 1.7e-12 76.6 52 63.5
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 1.7e-12 76.6 47 70.2
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 3.8e-12 75.5 47 68.1
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 1.5e-11 73.6 47 63.8
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 3.2e-11 72.4 47 63.8
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 5.5e-11 71.6 52 65.4
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 7.2e-11 71.2 47 70.2
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 7.2e-11 71.2 49 67.3
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 9.4e-11 70.9 46 69.6
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 1.6e-10 70.1 47 66.0
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 2.7e-10 69.3 46 65.2
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 2.7e-10 69.3 47 66.0
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 4.7e-10 68.6 52 57.7
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 4.7e-10 68.6 53 60.4
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 1.0e-09 67.4 50 60.0
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 1.0e-09 67.4 50 60.0
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 2.3e-09 66.2 47 63.8
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 3.0e-09 65.9 47 59.6
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 3.0e-09 65.9 51 60.8
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 4.0e-09 65.5 47 66.0
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 5.2e-09 65.1 51 60.8
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 8.8e-09 64.3 50 58.0
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 8.8e-09 64.3 51 58.8
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 1.5e-08 63.5 44 63.6
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 2.0e-08 63.2 44 65.9
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 2.0e-08 63.2 47 55.3
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 2.0e-08 63.2 48 60.4
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 2.6e-08 62.8 52 57.7
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 5.7e-08 61.6 57 52.6
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 5.7e-08 61.6 47 57.4
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 5.7e-08 61.6 45 68.9
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 9.7e-08 60.8 47 61.7
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 9.7e-08 60.8 47 61.7
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 2.2e-07 59.7 47 53.2
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 2.8e-07 59.3 47 57.4
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 3.7e-07 58.9 52 55.8
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 3.7e-07 58.9 52 51.9
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 6.3e-07 58.2 47 55.3
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 6.3e-07 58.2 48 60.4
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 8.2e-07 57.8 45 60.0
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 1.1e-06 57.4 54 53.7
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 1.1e-06 57.4 33 75.8
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 1.4e-06 57.0 75 41.3
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 2.4e-06 56.2 47 55.3
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 4.1e-06 55.5 45 55.6
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 5.3e-06 55.1 52 48.1
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 5.3e-06 55.1 46 54.3
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 5.3e-06 55.1 47 57.4
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 7.0e-06 54.7 37 62.2
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 7.0e-06 54.7 62 43.5
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 9.1e-06 54.3 46 56.5
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 9.1e-06 54.3 45 51.1


User provided reference genes

Program Settings