Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01730 Davidia involucrata HOM05D008203 ORTHO05D010058 1.7e-238 828.9 408 100.0
Dinv26317 Davidia involucrata HOM05D008203 ORTHO05D010058 2.1e-225 785.4 408 96.1
Dinv26295 Davidia involucrata HOM05D008203 ORTHO05D010058 2.1e-185 652.5 340 95.9
Dinv17958 Davidia involucrata HOM05D008203 ORTHO05D010058 1.9e-181 639.4 408 80.1
Dinv02734 Davidia involucrata HOM05D008203 ORTHO05D010058 1.2e-180 636.7 408 80.1
Dinv03878 Davidia involucrata HOM05D008203 ORTHO05D010058 7.8e-180 634.0 408 79.4
Dinv35176 Davidia involucrata HOM05D008203 ORTHO05D010058 1.7e-179 632.9 408 79.7
Dinv17953 Davidia involucrata HOM05D008203 ORTHO05D010058 3.3e-178 628.6 408 78.9
Dinv41236 Davidia involucrata HOM05D008203 ORTHO05D010058 7.3e-170 600.9 359 86.1
Dinv28270 Davidia involucrata HOM05D008203 ORTHO05D010058 1.6e-169 599.7 359 86.1
Dinv36938 Davidia involucrata HOM05D008203 ORTHO05D010058 4.2e-165 585.1 340 86.2
Dinv29071 Davidia involucrata HOM05D008203 ORTHO05D010058 8.7e-163 577.4 359 82.7
Dinv24543 Davidia involucrata HOM05D008203 ORTHO05D010058 1.4e-160 570.1 408 73.0
Dinv03186 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-156 555.4 359 81.1
Dinv05912 Davidia involucrata HOM05D008203 ORTHO05D010058 1.8e-144 516.5 267 96.6
Dinv35862 Davidia involucrata HOM05D008203 ORTHO05D010058 1.7e-142 510.0 341 77.1
Dinv15828 Davidia involucrata HOM05D008203 ORTHO05D010058 6.7e-139 498.0 340 76.2
Dinv21723 Davidia involucrata HOM05D008203 ORTHO05D010058 6.9e-136 488.0 334 75.1
Dinv01680 Davidia involucrata HOM05D008203 ORTHO05D010058 6.9e-128 461.5 359 70.5
Dinv10896 Davidia involucrata HOM05D008203 ORTHO05D001742 3.3e-122 442.6 281 81.1
Dinv19459 Davidia involucrata HOM05D008203 ORTHO05D010058 2.2e-121 439.9 295 76.6
Dinv09224 Davidia involucrata HOM05D008203 ORTHO05D010058 4.8e-121 438.7 408 59.6
Dinv42810 Davidia involucrata HOM05D008203 ORTHO05D010058 5.3e-120 435.3 408 59.3
Dinv43291 Davidia involucrata HOM05D008203 ORTHO05D010058 5.3e-120 435.3 408 59.3
Dinv19910 Davidia involucrata HOM05D008203 ORTHO05D010058 1.2e-119 434.1 289 78.2
Dinv27624 Davidia involucrata HOM05D008203 ORTHO05D010058 1.1e-117 427.6 302 74.5
Dinv04450 Davidia involucrata HOM05D008203 ORTHO05D010058 2.2e-113 413.3 209 96.2
Dinv25373 Davidia involucrata HOM05D008203 ORTHO05D010058 7.7e-111 404.8 206 96.1
Dinv09840 Davidia involucrata HOM05D008203 ORTHO05D010058 1.6e-108 397.1 202 96.0
Dinv39229 Davidia involucrata HOM05D008203 ORTHO05D010058 2.7e-108 396.4 295 70.5
Dinv04449 Davidia involucrata HOM05D008203 ORTHO05D010058 3.2e-93 346.3 180 95.0
Dinv15061 Davidia involucrata HOM05D008203 ORTHO05D010058 1.4e-91 340.9 184 92.4
Hma1.2p1_1466F.1_g285450 Hydrangea macrophylla HOM05D008203 ORTHO05D010058 8.0e-84 315.1 496 41.3
Dinv15060 Davidia involucrata HOM05D008203 ORTHO05D010058 2.6e-82 310.1 156 97.4
Dinv12381 Davidia involucrata HOM05D008203 ORTHO05D010058 1.7e-81 307.4 359 51.3
Dinv39777 Davidia involucrata HOM05D008203 ORTHO05D010058 1.0e-78 298.1 163 89.0
Dinv11113 Davidia involucrata HOM05D008203 ORTHO05D010058 1.1e-77 294.7 180 85.0
Hma1.2p1_1257F.1_g270760 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.9e-77 293.9 735 30.9
Hma1.2p1_0704F.1_g206830 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-77 293.1 735 30.7
Hma1.2p1_0909F.1_g235780 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-77 293.1 735 30.7
Hma1.2p1_0055F.1_g031350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.6e-77 292.4 735 30.7
Hma1.2p1_0487F.1_g163640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-76 290.0 735 30.6
Hma1.2p1_0020F.1_g013900 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.6e-76 289.7 735 30.6
Dinv23878 Davidia involucrata HOM05D008203 ORTHO05D010058 6.8e-75 285.4 340 48.8
Dinv09841 Davidia involucrata HOM05D008203 ORTHO05D010058 5.8e-74 282.3 148 93.9
Dinv01748 Davidia involucrata HOM05D008203 ORTHO05D010058 2.5e-69 266.9 155 87.7
Dinv30322 Davidia involucrata HOM05D008203 ORTHO05D010058 1.4e-67 261.2 138 92.0
Dinv08775 Davidia involucrata HOM05D008203 ORTHO05D010058 1.7e-65 254.2 365 44.4
Hma1.2p1_1473F.1_g285740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-65 252.3 186 68.3
Hma1.2p1_0240F.1_g100330 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-58 231.5 735 27.3
Dinv10462 Davidia involucrata HOM05D008203 ORTHO05D010058 7.6e-58 228.8 150 74.0
Dinv07611 Davidia involucrata HOM05D008203 ORTHO05D010058 1.9e-53 214.2 157 66.2
Dinv16664 Davidia involucrata HOM05D008203 ORTHO05D010058 2.5e-53 213.8 129 80.6
Dinv32121 Davidia involucrata HOM05D008203 ORTHO05D010058 8.1e-52 208.8 149 71.8
Hma1.2p1_0565F.1_g179620 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.3e-45 186.4 175 55.4
Dinv15384 Davidia involucrata HOM05D008203 ORTHO05D010058 2.6e-42 177.2 355 33.0
Dinv17656 Davidia involucrata HOM05D001610 ORTHO05D001585 9.3e-40 168.7 94 80.9
Dinv05605 Davidia involucrata HOM05D008203 ORTHO05D010058 3.0e-38 163.7 302 35.4
Dinv28148 Davidia involucrata HOM05D008203 ORTHO05D010058 9.6e-37 158.7 184 49.5
Hma1.2p1_0445F.1_g154390 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.6e-37 158.7 128 64.1
Hma1.2p1_2319F.1_g319830 Hydrangea macrophylla HOM05D008203 ORTHO05D010058 7.9e-31 139.0 317 33.1
Rhsim01G0005300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-25 121.3 139 43.9
Rhsim06G0124700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-25 121.3 139 43.9
Rhsim09G0059500 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-25 121.3 139 43.9
Rhsim11G0143300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-25 121.3 139 43.9
RhsimUnG0155200 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.5e-24 116.3 136 43.4
Rhsim06G0096200 Rhododendron simsii HOM05D000017 ORTHO05D000013 9.3e-24 115.5 203 36.5
Rhsim13G0145400 Rhododendron simsii HOM05D000017 ORTHO05D000013 9.3e-24 115.5 139 42.4
Dinv13174 Davidia involucrata HOM05D008203 ORTHO05D010058 7.9e-23 112.5 101 52.5
Dinv25311 Davidia involucrata HOM05D008203 ORTHO05D010058 1.3e-22 111.7 187 39.0
Rhsim11G0055700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.3e-22 111.7 139 41.0
CSS0003176 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.3e-22 110.9 178 37.1
Dinv06985 Davidia involucrata HOM05D008203 ORTHO05D010058 5.1e-22 109.8 180 36.7
Rhsim05G0107200 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.4e-21 105.9 204 34.3
Dinv12218 Davidia involucrata HOM05D008203 ORTHO05D010058 6.2e-20 102.8 183 38.3
RhsimUnG0240100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.8e-19 101.3 144 37.5
Dinv23102 Davidia involucrata HOM05D008203 ORTHO05D010058 2.4e-19 100.9 180 36.7
Rhsim05G0108200 Rhododendron simsii HOM05D008203 ORTHO05D010058 3.1e-19 100.5 144 36.8
Dinv18743 Davidia involucrata HOM05D008203 ORTHO05D010058 5.3e-19 99.8 180 35.0
Rhsim09G0072900 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.0e-18 97.8 192 33.9
Dinv27607 Davidia involucrata HOM05D008203 ORTHO05D010058 2.6e-18 97.4 89 51.7
GSVIVG01014078001 Vitis vinifera HOM05D000017 ORTHO05D000013 2.6e-18 97.4 142 33.8
Rhsim08G0133700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.4e-18 97.1 139 38.8
Dinv17549 Davidia involucrata HOM05D008203 ORTHO05D010058 5.8e-18 96.3 290 26.2
Rhsim13G0165500 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.0e-17 93.2 144 36.1
Rhsim06G0097800 Rhododendron simsii HOM05D000017 ORTHO05D010058 1.1e-16 92.0 135 35.6
Dinv16442 Davidia involucrata HOM05D008203 ORTHO05D010058 1.4e-16 91.7 155 38.1
Hma1.2p1_0062F.1_g034320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.9e-16 91.3 177 31.1
Rhsim10G0108100 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.2e-16 90.5 192 32.3
Dinv14851 Davidia involucrata HOM05D008203 ORTHO05D010058 5.5e-16 89.7 111 43.2
Peaxi162Scf00349g00074 Petunia axillaris HOM05D000017 ORTHO05D000013 5.5e-16 89.7 146 32.2
Dinv24596 Davidia involucrata HOM05D008203 ORTHO05D010058 9.3e-16 89.0 111 43.2
CSS0013232 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.2e-15 88.6 100 42.0
Rhsim08G0151700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-15 88.6 112 40.2
Hma1.2p1_0062F.1_g034250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-15 87.8 177 30.5
Sopen01g001710 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-15 87.4 144 29.9
Rhsim12G0084000 Rhododendron simsii HOM05D000017 ORTHO05D010058 6.1e-15 86.3 146 34.2
Solyc01g005700.3 Solanum lycopersicum HOM05D000017 ORTHO05D000013 6.1e-15 86.3 144 29.2
Nitab4.5_0001730g0080 Nicotiana tabacum HOM05D008577 ORTHO05D010519 1.0e-14 85.5 144 29.2
Nitab4.5_0011238g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.8e-14 84.7 144 29.2
Dinv23714 Davidia involucrata HOM05D008203 ORTHO05D010058 3.9e-14 83.6 164 35.4
Peaxi162Scf00090g00211 Petunia axillaris HOM05D008577 ORTHO05D010519 5.1e-14 83.2 94 40.4
Peaxi162Scf00151g00053 Petunia axillaris HOM05D008577 ORTHO05D010519 5.1e-14 83.2 95 40.0
Peaxi162Scf00888g00311 Petunia axillaris HOM05D008577 ORTHO05D010519 8.7e-14 82.4 94 39.4
Peaxi162Scf01445g00115 Petunia axillaris HOM05D008577 ORTHO05D010519 1.5e-13 81.6 94 39.4
Peaxi162Scf00109g00152 Petunia axillaris HOM05D008577 ORTHO05D010519 1.9e-13 81.3 94 39.4
Peaxi162Scf00609g00063 Petunia axillaris HOM05D008577 ORTHO05D010519 1.9e-13 81.3 93 39.8
Peaxi162Scf00856g00033 Petunia axillaris HOM05D008577 ORTHO05D010519 1.9e-13 81.3 94 39.4
Peaxi162Scf01473g00011 Petunia axillaris HOM05D008577 ORTHO05D010519 2.5e-13 80.9 95 38.9
Actinidia16256 Actinidia chinensis HOM05D000017 ORTHO05D000013 3.3e-13 80.5 164 32.9
Peaxi162Scf00468g00008 Petunia axillaris HOM05D008577 ORTHO05D010519 5.7e-13 79.7 94 38.3
Peaxi162Scf00308g00111 Petunia axillaris HOM05D008577 ORTHO05D010519 7.4e-13 79.3 95 37.9
Peaxi162Scf00605g00044 Petunia axillaris HOM05D008577 ORTHO05D010519 9.7e-13 79.0 95 38.9
Peaxi162Scf00609g00062 Petunia axillaris HOM05D008577 ORTHO05D010519 9.7e-13 79.0 95 40.0
Hund19507 Selenicereus undatus HOM05D000017 ORTHO05D000013 9.7e-13 79.0 129 34.9
CSS0037974 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.3e-12 78.6 204 29.4
Peaxi162Scf00109g10114 Petunia axillaris HOM05D008577 ORTHO05D010519 2.2e-12 77.8 94 38.3
Actinidia16253 Actinidia chinensis HOM05D000017 ORTHO05D000013 2.8e-12 77.4 102 39.2
Peaxi162Scf00218g00182 Petunia axillaris HOM05D008577 ORTHO05D010519 3.7e-12 77.0 94 38.3
Rhsim13G0231800 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.7e-12 77.0 126 34.1
Sopen01g041870 Solanum pennellii HOM05D000160 ORTHO05D010519 8.2e-12 75.9 95 36.8
Solyc01g098300.1 Solanum lycopersicum HOM05D008577 ORTHO05D010519 1.1e-11 75.5 110 35.5
Peaxi162Scf00269g10121 Petunia axillaris HOM05D008577 ORTHO05D010519 1.8e-11 74.7 95 36.8
Solyc01g098310.3 Solanum lycopersicum HOM05D000160 ORTHO05D010519 3.1e-11 73.9 95 35.8
GSVIVG01023989001 Vitis vinifera HOM05D000017 ORTHO05D000013 3.1e-11 73.9 156 28.8
Peaxi162Scf00225g00412 Petunia axillaris HOM05D008577 ORTHO05D010519 5.3e-11 73.2 154 29.2
Peaxi162Scf00225g00625 Petunia axillaris HOM05D000160 ORTHO05D000914 9.0e-11 72.4 94 36.2
vmacro04230 Vaccinium macrocarpon HOM05D008577 ORTHO05D010519 2.0e-10 71.2 126 33.3
PGSC0003DMG400022481 Solanum tuberosum HOM05D000160 ORTHO05D010519 2.2e-09 67.8 98 32.7
Dinv29502 Davidia involucrata HOM05D000017 ORTHO05D000013 6.5e-09 66.2 126 32.5
Solyc01g098330.1 Solanum lycopersicum HOM05D000160 ORTHO05D010519 6.5e-09 66.2 89 33.7
RcHm_v2.0_Chr4g0384731 Rosa chinensis HOM05D000017 ORTHO05D000013 8.5e-09 65.9 128 29.7
PGSC0003DMG400022484 Solanum tuberosum HOM05D008577 ORTHO05D010519 8.5e-09 65.9 124 30.6
Peaxi162Scf00606g00516 Petunia axillaris HOM05D008577 ORTHO05D010519 1.1e-08 65.5 87 36.8
CANSAT11G0754 Cannabis sativa HOM05D000017 ORTHO05D000013 2.5e-08 64.3 113 31.9
Dinv01455 Davidia involucrata HOM05D008203 ORTHO05D010058 2.5e-08 64.3 79 44.3
FvH4_3g40971 Fragaria vesca HOM05D000017 ORTHO05D000013 2.5e-08 64.3 130 28.5
Peaxi162Scf00046g01112 Petunia axillaris HOM05D008577 ORTHO05D010519 2.5e-08 64.3 87 36.8
RcHm_v2.0_Chr2g0096851 Rosa chinensis HOM05D000017 ORTHO05D000013 2.5e-08 64.3 128 29.7
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-08 63.5 112 31.2
Solyc01g098280.4 Solanum lycopersicum HOM05D008577 ORTHO05D010519 4.2e-08 63.5 101 30.7
Sopen01g041850 Solanum pennellii HOM05D008577 ORTHO05D010519 4.2e-08 63.5 101 30.7
FvH4_7g30371 Fragaria vesca HOM05D000017 ORTHO05D000013 5.5e-08 63.2 130 26.9
Lj7C243T2 Lonicera japonica HOM05D000017 ORTHO05D000013 5.5e-08 63.2 77 36.4
Peaxi162Scf00477g00003 Petunia axillaris HOM05D008577 ORTHO05D010519 5.5e-08 63.2 66 43.9
RcHm_v2.0_Chr7g0220031 Rosa chinensis HOM05D000017 ORTHO05D000013 5.5e-08 63.2 118 31.4
SHI39022 Sapria himalayana HOM05D000017 ORTHO05D000013 5.5e-08 63.2 133 30.1
Sc20g0004660 Simmondsia chinensis HOM05D039075 ORTHO05D010519 7.2e-08 62.8 100 35.0
FvH4_6g37972 Fragaria vesca HOM05D000017 ORTHO05D000013 9.4e-08 62.4 130 27.7
FvH4_3g32421 Fragaria vesca HOM05D000017 ORTHO05D000013 1.6e-07 61.6 130 26.9
FvH4_6g33561 Fragaria vesca HOM05D000017 ORTHO05D000013 1.6e-07 61.6 122 28.7
FAN21G0343 Fragaria x ananassa HOM05D000017 ORTHO05D000013 1.6e-07 61.6 129 27.9
Dinv01475 Davidia involucrata HOM05D000017 ORTHO05D000013 2.1e-07 61.2 139 33.1
FAN01G1465 Fragaria x ananassa HOM05D000017 ORTHO05D000013 2.1e-07 61.2 114 30.7
SHI00940 Sapria himalayana HOM05D000017 ORTHO05D000013 2.1e-07 61.2 137 28.5
FAN06G1721 Fragaria x ananassa HOM05D000017 ORTHO05D000013 2.7e-07 60.8 162 25.9
Lalb_Chr21g0310071 Lupinus albus HOM05D000017 ORTHO05D000013 2.7e-07 60.8 127 26.8
Dinv03370 Davidia involucrata HOM05D037695 ORTHO05D010058 4.6e-07 60.1 84 35.7
FvH4_4g09692 Fragaria vesca HOM05D000017 ORTHO05D000013 4.6e-07 60.1 135 26.7
Nn4g26520 Nelumbo nucifera HOM05D000017 ORTHO05D000013 4.6e-07 60.1 150 27.3
PGR102G2539 Punica granatum HOM05D000017 ORTHO05D000013 4.6e-07 60.1 174 23.6
MSTRG.9720 Avicennia marina HOM05D000017 ORTHO05D000013 6.1e-07 59.7 140 27.1
Rhsim05G0122200 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.1e-07 59.7 139 28.8
FAN06G1204 Fragaria x ananassa HOM05D000017 ORTHO05D000013 7.9e-07 59.3 130 26.9
Nn4g26534 Nelumbo nucifera HOM05D000017 ORTHO05D000013 1.0e-06 58.9 137 25.5
Rhsim07G0149400 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.0e-06 58.9 65 47.7
Sabra02G0130100 Salix brachista HOM05D000017 ORTHO05D000013 1.0e-06 58.9 163 26.4
FvH4_7g20282 Fragaria vesca HOM05D000017 ORTHO05D000013 1.4e-06 58.5 162 25.9
CANSAT25G3367 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-06 58.2 104 29.8
CANSAT56G3380 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-06 58.2 128 28.1
ECA240G4090 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.8e-06 58.2 132 24.2
Nn3g21926 Nelumbo nucifera HOM05D000017 ORTHO05D000013 1.8e-06 58.2 129 27.1
Nitab4.5_0007678g0010 Nicotiana tabacum HOM05D008577 ORTHO05D010519 1.8e-06 58.2 140 27.9
CAN.G65.63 Capsicum annuum HOM05D000017 ORTHO05D000013 3.9e-06 57.0 144 25.0
Actinidia02538 Actinidia chinensis HOM05D000017 ORTHO05D000013 5.1e-06 56.6 134 28.4
Ca_10198_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 5.1e-06 56.6 127 26.8
FAN11G1406 Fragaria x ananassa HOM05D000017 ORTHO05D000013 5.1e-06 56.6 102 29.4
MBI07_g07553_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 5.1e-06 56.6 142 23.9
Prupe.6G182100 Prunus persica HOM05D000017 ORTHO05D000013 5.1e-06 56.6 126 29.4
Hund04750 Selenicereus undatus HOM05D000170 ORTHO05D000159 5.1e-06 56.6 126 31.0
Nitab4.5_0000477g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000013 6.7e-06 56.2 141 24.8
Sopen01g041890 Solanum pennellii HOM05D000160 ORTHO05D010519 6.7e-06 56.2 119 25.2
CSS0049790 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.8e-06 55.8 130 28.5
Sopen05g031710 Solanum pennellii HOM05D000017 ORTHO05D000013 8.8e-06 55.8 184 22.3
TPR.G2641 Trifolium pratense HOM05D000017 ORTHO05D000013 8.8e-06 55.8 127 26.8


User provided reference genes

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