Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01634 Davidia involucrata HOM05D004639 ORTHO05D005201 1.9e-295 1018.5 528 100.0
TAR376G0371 Trochodendron aralioides HOM05D004639 ORTHO05D005201 7.7e-71 272.3 227 62.6
Actinidia23035 Actinidia chinensis HOM05D004639 ORTHO05D005201 1.1e-69 268.5 196 65.3
Rhsim11G0007200 Rhododendron simsii HOM05D004639 ORTHO05D005201 3.2e-69 266.9 170 73.5
Hma1.2p1_1077F.1_g254710 Hydrangea macrophylla HOM05D004639 ORTHO05D005201 1.6e-68 264.6 196 68.9
Cpa.g.sc15.68 Carica papaya HOM05D004639 ORTHO05D005201 3.6e-68 263.5 203 63.1
Ciclev10028470m.g Citrus clementina HOM05D004639 ORTHO05D005201 4.0e-67 260.0 161 73.3
Prupe.4G286600 Prunus persica HOM05D004639 ORTHO05D005201 1.2e-66 258.5 417 38.8
SalBow6G0181 Salvia bowleyana HOM05D004639 ORTHO05D005201 3.4e-66 256.9 227 58.1
Migut.A01100 Erythranthe guttata HOM05D004639 ORTHO05D005201 1.3e-65 255.0 204 60.3
Oeu061992.1 Olea europaea HOM05D004639 ORTHO05D005201 3.7e-65 253.4 468 37.8
vmacro04281 Vaccinium macrocarpon HOM05D004639 ORTHO05D005201 6.3e-65 252.7 163 73.6
SalBow6G5700 Salvia bowleyana HOM05D004639 ORTHO05D005201 1.8e-64 251.1 531 37.1
vmacro22429 Vaccinium macrocarpon HOM05D004639 ORTHO05D005201 2.4e-64 250.8 163 73.6
Cc00_g06760 Coffea canephora HOM05D004639 ORTHO05D005201 5.3e-64 249.6 179 64.2
Nitab4.5_0010824g0010 Nicotiana tabacum HOM05D004639 ORTHO05D005201 1.6e-63 248.1 396 42.9
MD00G1164900 Malus domestica HOM05D004639 ORTHO05D005201 2.2e-62 244.2 517 34.4
TWI15G1026 Tripterygium wilfordii HOM05D004639 ORTHO05D005201 2.9e-62 243.8 331 43.2
CAN.G989.2 Capsicum annuum HOM05D004639 ORTHO05D005201 3.8e-62 243.4 201 60.2
THA.LOC104805811 Tarenaya hassleriana HOM05D004639 ORTHO05D005201 3.8e-62 243.4 173 63.0
Manes.18G143900 Manihot esculenta HOM05D004639 ORTHO05D005201 5.0e-62 243.0 164 68.9
Solyc02g021100.3 Solanum lycopersicum HOM05D004639 ORTHO05D005201 1.5e-61 241.5 208 58.2
CANSAT64G2852 Cannabis sativa HOM05D004639 ORTHO05D005201 2.5e-61 240.7 158 69.0
Sopen02g005400 Solanum pennellii HOM05D004639 ORTHO05D005201 2.5e-61 240.7 208 58.2
CANSAT64G1383 Cannabis sativa HOM05D004639 ORTHO05D005201 4.2e-61 240.0 158 69.0
CANSAT64G2443 Cannabis sativa HOM05D004639 ORTHO05D005201 4.2e-61 240.0 158 69.0
Carub.0003s0750 Capsella rubella HOM05D004639 ORTHO05D005201 4.2e-61 240.0 184 61.4
TWI31G0951 Tripterygium wilfordii HOM05D004639 ORTHO05D005201 4.2e-61 240.0 257 50.6
QL01p053168 Quercus lobata HOM05D004639 ORTHO05D005201 5.5e-61 239.6 185 60.0
QL01p053770 Quercus lobata HOM05D004639 ORTHO05D005201 9.4e-61 238.8 182 61.5
arahy.Tifrunner.gnm1.ann1.CP937L Arachis hypogaea HOM05D004639 ORTHO05D005201 2.1e-60 237.7 193 60.6
Peaxi162Scf00331g00311 Petunia axillaris HOM05D004639 ORTHO05D005201 2.7e-60 237.3 151 72.2
RcHm_v2.0_Chr3g0497491 Rosa chinensis HOM05D004639 ORTHO05D005201 3.6e-60 236.9 194 61.9
Nitab4.5_0001799g0030 Nicotiana tabacum HOM05D004639 ORTHO05D005201 4.7e-60 236.5 435 38.9
Gorai.006G008100 Gossypium raimondii HOM05D004639 ORTHO05D005201 6.1e-60 236.1 157 69.4
Aqoxy4G01839 Aquilegia oxysepala HOM05D004639 ORTHO05D005201 1.0e-59 235.3 176 63.6
arahy.Tifrunner.gnm1.ann1.GWL1KB Arachis hypogaea HOM05D004639 ORTHO05D005201 1.0e-59 235.3 342 42.4
Sp3g06840 Schrenkiella parvula HOM05D004639 ORTHO05D005201 1.8e-59 234.6 204 57.8
Gohir.D09G006600 Gossypium hirsutum HOM05D004639 ORTHO05D005201 3.0e-59 233.8 157 68.8
Sabra12G0026100 Salix brachista HOM05D004639 ORTHO05D005201 3.0e-59 233.8 156 67.9
Aa31LG5G18470 Aethionema arabicum HOM05D004639 ORTHO05D005201 4.0e-59 233.4 177 64.4
Potri.012G037700 Populus trichocarpa HOM05D004639 ORTHO05D005201 5.2e-59 233.0 154 68.8
Gohir.A09G007300 Gossypium hirsutum HOM05D004639 ORTHO05D005201 6.8e-59 232.6 246 49.6
AL3G19300 Arabidopsis lyrata HOM05D004639 ORTHO05D005201 8.8e-59 232.3 174 62.1
VMungo0540G1855 Vigna mungo HOM05D004639 ORTHO05D005201 2.6e-58 230.7 167 64.1
Thhalv10020704m.g Eutrema salsugineum HOM05D004639 ORTHO05D005201 4.4e-58 229.9 184 59.2
SGA_v2.0_scaffold291G47333 Striga asiatica HOM05D004639 ORTHO05D005201 4.4e-58 229.9 231 51.5
Thecc.04G056700 Theobroma cacao HOM05D004639 ORTHO05D005201 5.7e-58 229.6 417 38.6
A07p00740 Brassica napus HOM05D004639 ORTHO05D005201 1.3e-57 228.4 206 56.3
FvH4_1g27870 Fragaria vesca HOM05D004639 ORTHO05D005201 2.2e-57 227.6 184 60.9
FAN26G1776 Fragaria x ananassa HOM05D004639 ORTHO05D005201 2.2e-57 227.6 184 60.9
FAN19G3130 Fragaria x ananassa HOM05D004639 ORTHO05D005201 2.8e-57 227.3 184 60.9
MBI03_g13041_MAGBIO Magnolia biondii HOM05D004639 ORTHO05D005201 3.7e-57 226.9 179 62.0
BraA07t27872Z Brassica rapa HOM05D004639 ORTHO05D005201 6.3e-57 226.1 174 61.5
Glyma.13G009500 Glycine max HOM05D004639 ORTHO05D005201 6.3e-57 226.1 152 68.4
BcaB04g16901 Brassica carinata HOM05D004639 ORTHO05D005201 8.3e-57 225.7 184 59.2
C07p01740 Brassica napus HOM05D004639 ORTHO05D005201 2.4e-56 224.2 174 60.9
BolC7t40577H Brassica oleracea HOM05D004639 ORTHO05D005201 2.4e-56 224.2 174 60.9
Lj2g0020909 Lotus japonicus HOM05D004639 ORTHO05D005201 3.1e-56 223.8 184 62.5
Atru.chr9.65 Acer truncatum HOM05D004639 ORTHO05D005201 4.1e-56 223.4 155 68.4
Lsat_1_v5_gn_3_140620 Lactuca sativa HOM05D004639 ORTHO05D005201 5.4e-56 223.0 158 62.0
ECA234G0087 Erigeron canadensis HOM05D004639 ORTHO05D005201 7.0e-56 222.6 181 58.0
DCAR_016067 Daucus carota HOM05D004639 ORTHO05D005201 1.2e-55 221.9 170 62.9
Dinv08242 Davidia involucrata HOM05D004639 ORTHO05D005201 1.2e-55 221.9 106 100.0
PSO384G4518 Papaver somniferum HOM05D004639 ORTHO05D005201 2.0e-55 221.1 183 57.4
PSO493G0020 Papaver somniferum HOM05D004639 ORTHO05D005201 2.0e-55 221.1 183 57.4
PGR031G3121 Punica granatum HOM05D004639 ORTHO05D005201 2.7e-55 220.7 151 64.9
MSTRG.8994 Avicennia marina HOM05D004639 ORTHO05D005201 3.5e-55 220.3 519 33.5
Nn5g27169 Nelumbo nucifera HOM05D004639 ORTHO05D005201 6.6e-54 216.1 197 55.8
ClCG08G005050 Citrullus lanatus HOM05D004639 ORTHO05D005201 1.5e-53 214.9 173 59.0
GSVIVG01003641001 Vitis vinifera HOM05D004639 ORTHO05D005201 3.3e-53 213.8 468 34.8
AUR62017756 Chenopodium quinoa HOM05D004639 ORTHO05D005201 4.2e-53 213.4 219 50.2
Lj2g0022882 Lotus japonicus HOM05D004639 ORTHO05D005201 7.2e-53 212.6 171 61.4
ECA234G3785 Erigeron canadensis HOM05D004639 ORTHO05D005201 1.6e-52 211.5 325 38.8
Medtr0037s0060 Medicago truncatula HOM05D004639 ORTHO05D005201 8.0e-52 209.1 181 58.6
Phvul.L000400 Phaseolus vulgaris HOM05D004639 ORTHO05D005201 8.0e-52 209.1 495 34.3
MELO3C022885.2 Cucumis melo HOM05D004639 ORTHO05D005201 5.2e-51 206.5 217 47.9
CsaV3_5G037160 Cucumis sativus L. HOM05D004639 ORTHO05D005201 1.5e-50 204.9 217 47.9
ATR0068G005 Amborella trichopoda HOM05D004639 ORTHO05D005201 2.6e-50 204.1 197 50.8
Hund25534 Selenicereus undatus HOM05D004639 ORTHO05D005201 2.6e-50 204.1 212 49.5
Sabra19G0060900 Salix brachista HOM05D004639 ORTHO05D005201 3.4e-50 203.8 209 52.2
Sabra19G0061000 Salix brachista HOM05D004639 ORTHO05D005201 3.4e-50 203.8 209 52.2
SabraUnG0000100 Salix brachista HOM05D004639 ORTHO05D005201 3.4e-50 203.8 209 52.2
SabraUnG0000200 Salix brachista HOM05D004639 ORTHO05D005201 3.4e-50 203.8 209 52.2
Potri.014G187300 Populus trichocarpa HOM05D004639 ORTHO05D005201 7.5e-50 202.6 155 62.6
Potri.014G189400 Populus trichocarpa HOM05D004639 ORTHO05D005201 7.5e-50 202.6 217 50.7
Ah.05g167280 Amaranthus hybridus HOM05D001485 ORTHO05D001407 1.3e-49 201.8 489 32.7
Potri.014G187000 Populus trichocarpa HOM05D004639 ORTHO05D005201 1.3e-49 201.8 155 62.6
CiPaw.15G093500 Carya illinoinensis HOM05D004639 ORTHO05D005201 1.7e-49 201.4 172 58.1
SEGI_27362 Sequoiadendron giganteum HOM05D004639 ORTHO05D005201 3.7e-49 200.3 144 63.9
EL10As7g23724 Beta vulgaris HOM05D004639 ORTHO05D005201 8.3e-49 199.1 217 48.8
HanXRQChr12g0386021 Helianthus annuus HOM05D004639 ORTHO05D005201 1.4e-48 198.4 144 60.4
Eucgr.B01580 Eucalyptus grandis HOM05D004639 ORTHO05D005201 2.4e-48 197.6 190 53.7
Lalb_Chr00c23g0406301 Lupinus albus HOM05D004639 ORTHO05D005201 3.2e-48 197.2 154 63.0
Medtr0037s0250 Medicago truncatula HOM05D004639 ORTHO05D005201 3.2e-48 197.2 171 56.7
Sabra19G0060700 Salix brachista HOM05D004639 ORTHO05D005201 2.7e-47 194.1 146 63.0
HanXRQChr16g0532761 Helianthus annuus HOM05D004639 ORTHO05D005201 3.5e-47 193.7 144 59.0
Nitab4.5_0000843g0080 Nicotiana tabacum HOM05D004639 ORTHO05D005201 1.3e-46 191.8 282 45.7
HPP92_007024 Vanilla planifolia HOM05D004639 ORTHO05D005201 5.6e-45 186.4 156 53.8
BcaC08g44553 Brassica carinata HOM05D004639 ORTHO05D005201 7.3e-45 186.0 202 51.5
SHI25031 Sapria himalayana HOM05D004639 ORTHO05D005201 1.6e-44 184.9 148 56.1
Sc22g0004560 Simmondsia chinensis HOM05D004639 ORTHO05D005201 2.1e-44 184.5 531 31.6
Duzib235G0802 Durio zibethinus HOM05D004639 ORTHO05D005201 2.8e-44 184.1 268 44.0
CDE02G2478 Ceratophyllum demersum HOM05D004639 ORTHO05D005201 1.4e-43 181.8 224 47.3
unitig_22.g6364 Utricularia gibba HOM05D004639 ORTHO05D005201 4.0e-43 180.3 137 65.7
AUR62032895 Chenopodium quinoa HOM05D004639 ORTHO05D005201 2.0e-42 177.9 219 44.3
Potri.014G187766 Populus trichocarpa HOM05D004639 ORTHO05D005201 3.4e-42 177.2 155 57.4
Lj2g0018447 Lotus japonicus HOM05D004639 ORTHO05D005201 1.7e-41 174.9 205 44.4
HPP92_007076 Vanilla planifolia HOM05D004639 ORTHO05D005201 1.1e-40 172.2 144 54.9
Sabra19G0060200 Salix brachista HOM05D004639 ORTHO05D005201 3.2e-40 170.6 216 45.4
BcaC06g36658 Brassica carinata HOM05D004639 ORTHO05D005201 1.7e-38 164.9 142 57.0
Mapoly0049s0024 Marchantia polymorpha HOM05D004639 ORTHO05D005201 6.6e-38 162.9 209 45.5
QL01p052883 Quercus lobata HOM05D011240 ORTHO05D005201 2.5e-37 161.0 98 73.5
Pp3c15_4380 Physcomitrium patens HOM05D004639 ORTHO05D005201 4.3e-37 160.2 131 56.5
CBR_g51322 Chara braunii HOM05D004639 ORTHO05D005201 1.8e-35 154.8 133 51.9
Sed0017627 Sechium edule HOM05D004639 ORTHO05D005201 1.8e-35 154.8 143 55.9
Os09g0101100 Oryza sativa ssp. japonica HOM05D004639 ORTHO05D005201 2.6e-34 151.0 164 45.7
CARHR082670 Cardamine hirsuta HOM05D004639 ORTHO05D005201 3.4e-34 150.6 99 68.7
TPR.G9531 Trifolium pratense HOM05D004639 ORTHO05D005201 1.3e-33 148.7 106 61.3
SMO334G0025 Selaginella moellendorffii HOM05D004639 ORTHO05D005201 1.2e-31 142.1 136 46.3
C06p20180 Brassica napus HOM05D004639 ORTHO05D005201 1.6e-31 141.7 161 45.3
BolC6t37199H Brassica oleracea HOM05D004639 ORTHO05D005201 1.6e-31 141.7 161 45.3
Lalb_Chr18g0049251 Lupinus albus HOM05D004639 ORTHO05D005201 1.3e-30 138.7 101 65.3
Zm00001eb264110 Zea mays HOM05D004639 ORTHO05D005201 3.0e-30 137.5 183 38.8
Lalb_Chr00c55g0413711 Lupinus albus HOM05D004639 ORTHO05D005201 6.6e-30 136.3 97 67.0
PRCOL_00006916 Prasinoderma coloniale HOM05D004639 ORTHO05D005201 6.6e-30 136.3 134 49.3
CBR_g37349 Chara braunii HOM05D000004 ORTHO05D000002 2.2e-25 121.3 102 55.9
Cre05.g234250 Chlamydomonas reinhardtii HOM05D004639 ORTHO05D005201 1.9e-24 118.2 152 38.8
HPP92_015991 Vanilla planifolia HOM05D004639 ORTHO05D005201 4.1e-24 117.1 104 50.0
COL.COLO4_05916 Corchorus olitorius HOM05D004639 ORTHO05D005201 3.5e-23 114.0 130 46.9
Gohir.D02G140450 Gossypium hirsutum HOM05D004639 ORTHO05D005201 1.3e-22 112.1 76 64.5
CSS0047186 Camellia sinensis var. sinensis HOM05D004639 ORTHO05D005201 3.9e-22 110.5 77 64.9
Sabra19G0060300 Salix brachista HOM05D004639 ORTHO05D005201 3.3e-21 107.5 78 62.8
Gorai.005G156200 Gossypium raimondii HOM05D004639 ORTHO05D005201 5.6e-21 106.7 76 61.8
QL93p0107_0438 Quercus lobata HOM05D004639 ORTHO05D005201 6.2e-20 103.2 56 75.0
Sabra19G0060600 Salix brachista HOM05D004639 ORTHO05D005201 1.1e-19 102.4 133 45.9
CSS0021628 Camellia sinensis var. sinensis HOM05D004639 ORTHO05D005201 1.8e-19 101.7 65 72.3
CARHR082660 Cardamine hirsuta HOM05D004639 ORTHO05D005201 6.4e-17 93.2 66 66.7
Haze_08020 Corylus avellana HOM05D004639 ORTHO05D005201 3.5e-15 87.4 70 60.0
FAN23G0569 Fragaria x ananassa HOM05D004639 ORTHO05D005201 2.3e-14 84.7 77 55.8
QL01p054228 Quercus lobata HOM05D004639 ORTHO05D005201 2.3e-14 84.7 88 45.5
QL02p058806 Quercus lobata HOM05D004639 ORTHO05D005201 2.3e-14 84.7 97 43.3
AT3G07930 Arabidopsis thaliana HOM05D004639 ORTHO05D005201 3.0e-14 84.3 74 52.7
Psat1g014800 Pisum sativum HOM05D004639 ORTHO05D005201 3.9e-14 84.0 81 50.6
TPR.G22982 Trifolium pratense HOM05D004639 ORTHO05D005201 6.6e-14 83.2 96 45.8
Medtr6g034730 Medicago truncatula HOM05D004639 ORTHO05D005201 3.6e-12 77.4 63 57.1
Medtr6g033105 Medicago truncatula HOM05D004639 ORTHO05D005201 1.5e-10 72.0 86 48.8
unitig_22.g6365 Utricularia gibba HOM05D004639 ORTHO05D005201 2.6e-10 71.2 62 58.1
Lalb_Chr18g0049241 Lupinus albus HOM05D004639 ORTHO05D005201 8.4e-09 66.2 55 58.2
MCO02G309 Micromonas commoda HOM05D004639 ORTHO05D005201 2.7e-07 61.2 157 30.6
SHI28181 Sapria himalayana HOM05D000002 ORTHO05D000047 5.1e-06 57.0 37 62.2


User provided reference genes

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