Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01616 Davidia involucrata HOM05D018364 ORTHO05D015224 1.2e-38 162.5 71 100.0
Dinv21718 Davidia involucrata HOM05D018364 ORTHO05D015224 4.5e-35 150.6 68 98.5
Dinv21717 Davidia involucrata HOM05D018364 ORTHO05D015224 1.7e-34 148.7 68 97.1
Dinv00678 Davidia involucrata HOM05D018364 ORTHO05D015224 1.1e-33 146.0 68 94.1
Dinv00925 Davidia involucrata HOM05D018364 ORTHO05D015224 4.0e-15 84.3 37 97.3
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.1e-10 67.4 61 50.8
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-09 65.5 61 50.8
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-09 65.5 61 50.8
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-09 65.5 61 50.8
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-09 64.7 61 49.2
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.3e-09 63.5 61 47.5
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.5e-09 63.2 61 45.9
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.5e-09 63.2 61 45.9
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-08 62.8 61 47.5
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-08 62.8 61 47.5
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-08 62.8 61 47.5
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-08 62.8 61 45.9
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-08 62.8 61 47.5
PGSC0003DMG400037849 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.2e-08 62.8 69 44.9
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-08 62.0 61 45.9
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-08 62.0 59 47.5
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.1e-08 62.0 62 43.5
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-08 60.8 52 51.9
Dinv10632 Davidia involucrata HOM05D037548 ORTHO05D015224 6.2e-08 60.5 65 43.1
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.1e-08 60.1 61 47.5
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-07 59.3 61 44.3
Actinidia20107 Actinidia chinensis HOM05D018364 ORTHO05D015224 2.4e-07 58.5 66 43.9
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.4e-07 58.5 45 46.7
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 2.4e-07 58.5 45 46.7
Sopen08g008140 Solanum pennellii HOM05D001426 ORTHO05D003926 2.4e-07 58.5 53 45.3
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-07 58.2 67 41.8
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 3.1e-07 58.2 67 41.8
Dinv17501 Davidia involucrata HOM05D018364 ORTHO05D015224 3.1e-07 58.2 27 92.6
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.2e-07 57.4 61 44.3
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 8.9e-07 56.6 74 37.8
Sopen10g017820 Solanum pennellii HOM05D000004 ORTHO05D000002 8.9e-07 56.6 51 45.1
Sopen09g021390 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-06 55.8 63 38.1
Sopen11g023340 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.5 64 35.9
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.6e-06 55.1 66 42.4
Oeu060111.1 Olea europaea HOM05D008284 ORTHO05D015224 2.6e-06 55.1 40 50.0
Sopen10g024160 Solanum pennellii HOM05D000004 ORTHO05D000034 2.6e-06 55.1 58 37.9
PGSC0003DMG400009589 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.6e-06 55.1 61 42.6
CSS0015456 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 3.4e-06 54.7 61 45.9
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-06 54.7 61 44.3
CSS0047664 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-06 54.7 66 40.9
Sopen02g009790 Solanum pennellii HOM05D000004 ORTHO05D000034 3.4e-06 54.7 35 57.1
Sopen11g021310 Solanum pennellii HOM05D000004 ORTHO05D000034 3.4e-06 54.7 59 37.3
A09p31490 Brassica napus HOM05D014383 ORTHO05D000034 4.4e-06 54.3 43 46.5
Sopen10g011880 Solanum pennellii HOM05D000004 ORTHO05D000034 4.4e-06 54.3 70 34.3
Sopen00g005700 Solanum pennellii HOM05D000004 ORTHO05D000034 5.8e-06 53.9 35 57.1
Sopen03g026230 Solanum pennellii HOM05D000004 ORTHO05D000034 5.8e-06 53.9 35 57.1
Sopen06g017340 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-06 53.9 35 57.1
Sopen10g024100 Solanum pennellii HOM05D000004 ORTHO05D000034 5.8e-06 53.9 58 36.2
Sopen12g026100 Solanum pennellii HOM05D000014 ORTHO05D000093 5.8e-06 53.9 43 48.8
CSS0002587 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 7.6e-06 53.5 62 45.2
Sopen09g015970 Solanum pennellii HOM05D000004 ORTHO05D000034 7.6e-06 53.5 46 47.8
Sopen10g024040 Solanum pennellii HOM05D000004 ORTHO05D000034 7.6e-06 53.5 58 37.9
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.9e-06 53.1 55 41.8
CSS0034226 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.9e-06 53.1 55 41.8
CSS0049976 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 9.9e-06 53.1 61 44.3
Sopen03g026260 Solanum pennellii HOM05D000004 ORTHO05D000034 9.9e-06 53.1 35 57.1
PGSC0003DMG400045939 Solanum tuberosum HOM05D000004 ORTHO05D000034 9.9e-06 53.1 50 46.0


User provided reference genes

Program Settings