Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01538 Davidia involucrata HOM05D000609 ORTHO05D000462 5.4e-87 324.3 168 100.0
Dinv23667 Davidia involucrata HOM05D000609 ORTHO05D000462 3.2e-39 165.6 169 62.7
Dinv12915 Davidia involucrata HOM05D000609 ORTHO05D000462 7.2e-31 137.9 168 54.2
CSS0000647 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 1.0e-24 117.5 165 50.9
Dinv23678 Davidia involucrata HOM05D000609 ORTHO05D000462 1.5e-20 103.6 130 55.4
CSS0011861 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 4.9e-19 98.6 164 43.9
Actinidia09869 Actinidia chinensis HOM05D000609 ORTHO05D000462 2.3e-16 89.7 167 44.3
Potri.013G135600 Populus trichocarpa HOM05D000609 ORTHO05D000462 4.3e-15 85.5 111 56.8
CiPaw.03G174500 Carya illinoinensis HOM05D000609 ORTHO05D000462 1.6e-14 83.6 164 38.4
Cfa014583 Carpinus fangiana HOM05D000609 ORTHO05D000462 2.1e-14 83.2 169 39.1
Haze_13135 Corylus avellana HOM05D000609 ORTHO05D000462 2.1e-14 83.2 168 38.7
TAR627G0231 Trochodendron aralioides HOM05D000609 ORTHO05D000462 6.8e-13 78.2 139 46.0
Thecc.02G176800 Theobroma cacao HOM05D000609 ORTHO05D000462 2.0e-12 76.6 179 41.9
Actinidia11051 Actinidia chinensis HOM05D000609 ORTHO05D000462 2.6e-12 76.3 163 40.5
Rhsim06G0147200 Rhododendron simsii HOM05D000609 ORTHO05D000462 1.3e-11 73.9 138 42.0
Gohir.A01G016300 Gossypium hirsutum HOM05D000609 ORTHO05D000462 3.7e-11 72.4 122 45.9
QL08p038189 Quercus lobata HOM05D000609 ORTHO05D000462 6.4e-11 71.6 154 40.9
CAN.G248.38 Capsicum annuum HOM05D000609 ORTHO05D000462 8.3e-11 71.2 113 46.0
Sabra19G0113400 Salix brachista HOM05D000609 ORTHO05D000462 8.3e-11 71.2 111 49.5
PGSC0003DMG400018352 Solanum tuberosum HOM05D000609 ORTHO05D000462 1.1e-10 70.9 116 47.4
Potri.019G102200 Populus trichocarpa HOM05D000609 ORTHO05D000462 1.4e-10 70.5 121 48.8
Duzib248G0477 Durio zibethinus HOM05D000609 ORTHO05D000462 1.8e-10 70.1 131 45.8
Nitab4.5_0000512g0230 Nicotiana tabacum HOM05D000609 ORTHO05D000462 5.4e-10 68.6 115 44.3
CiPaw.04G124700 Carya illinoinensis HOM05D000609 ORTHO05D000462 9.2e-10 67.8 120 42.5
Solyc07g054220.1 Solanum lycopersicum HOM05D000609 ORTHO05D000462 2.0e-09 66.6 94 48.9
MSTRG.12310 Avicennia marina HOM05D000609 ORTHO05D000462 2.7e-09 66.2 113 40.7
TAR629G2339 Trochodendron aralioides HOM05D000609 ORTHO05D000462 4.6e-09 65.5 136 41.2
Duzib132G0836 Durio zibethinus HOM05D000609 ORTHO05D000462 7.8e-09 64.7 179 40.8
Sabra13G0114800 Salix brachista HOM05D000609 ORTHO05D000462 1.0e-08 64.3 131 46.6
Cc05_g06840 Coffea canephora HOM05D000609 ORTHO05D000462 1.7e-08 63.5 169 38.5
Nitab4.5_0002526g0070 Nicotiana tabacum HOM05D000609 ORTHO05D000462 1.7e-08 63.5 124 44.4
COL.COLO4_06984 Corchorus olitorius HOM05D000609 ORTHO05D000462 3.0e-08 62.8 145 44.1
Nn1g04000 Nelumbo nucifera HOM05D000609 ORTHO05D000462 3.9e-08 62.4 106 45.3
Sopen07g028150 Solanum pennellii HOM05D000609 ORTHO05D000462 3.9e-08 62.4 94 46.8
Hma1.2p1_1201F.1_g266770 Hydrangea macrophylla HOM05D000609 ORTHO05D000462 5.0e-08 62.0 85 49.4
Nitab4.5_0003022g0060 Nicotiana tabacum HOM05D000609 ORTHO05D000462 1.1e-07 60.8 87 47.1
Gohir.D01G016300 Gossypium hirsutum HOM05D000609 ORTHO05D000462 1.5e-07 60.5 121 42.1
Gorai.002G018000 Gossypium raimondii HOM05D000609 ORTHO05D000462 1.5e-07 60.5 121 42.1
Manes.12G087500 Manihot esculenta HOM05D000609 ORTHO05D000462 1.5e-07 60.5 168 35.7
MD09G1252000 Malus domestica HOM05D000609 ORTHO05D000462 5.6e-07 58.5 127 37.0
Duzib052G0967 Durio zibethinus HOM05D000609 ORTHO05D000462 7.3e-07 58.2 128 41.4
Glyma.12G110400 Glycine max HOM05D000609 ORTHO05D000462 9.5e-07 57.8 122 36.9
DCAR_021235 Daucus carota HOM05D000609 ORTHO05D000462 2.1e-06 56.6 116 39.7
Phvul.011G118600 Phaseolus vulgaris HOM05D000609 ORTHO05D000462 2.8e-06 56.2 127 39.4
Peaxi162Scf02133g00004 Petunia axillaris HOM05D000609 ORTHO05D000462 3.6e-06 55.8 124 40.3
MD17G1244300 Malus domestica HOM05D000609 ORTHO05D000462 6.2e-06 55.1 111 41.4
VMungo1127G1433 Vigna mungo HOM05D000609 ORTHO05D000462 6.2e-06 55.1 132 40.2
Prupe.3G157100 Prunus persica HOM05D000609 ORTHO05D000462 8.0e-06 54.7 137 38.0


User provided reference genes

Program Settings