Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 1.9e-101 372.5 180 100.0
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 3.8e-30 135.6 111 67.6
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 7.2e-29 131.3 110 66.4
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 3.6e-28 129.0 110 63.6
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 3.6e-28 129.0 96 68.8
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 2.0e-26 123.2 105 65.7
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 3.1e-24 115.9 96 64.6
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 7.0e-24 114.8 90 68.9
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 7.0e-24 114.8 133 54.1
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 9.2e-24 114.4 114 58.8
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 1.2e-23 114.0 107 64.5
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 7.8e-23 111.3 107 57.9
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 1.0e-22 110.9 101 60.4
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 2.9e-22 109.4 113 55.8
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 2.9e-22 109.4 108 58.3
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 3.8e-22 109.0 98 59.2
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 3.8e-22 109.0 101 59.4
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 5.0e-22 108.6 105 57.1
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 8.6e-22 107.8 108 57.4
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 1.5e-21 107.1 99 58.6
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 1.5e-21 107.1 109 56.0
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 1.9e-21 106.7 108 57.4
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 1.9e-21 106.7 114 53.5
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 2.5e-21 106.3 108 57.4
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 2.5e-21 106.3 110 56.4
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 2.5e-21 106.3 110 56.4
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 3.3e-21 105.9 108 57.4
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 3.3e-21 105.9 107 57.9
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 3.3e-21 105.9 91 63.7
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 4.3e-21 105.5 115 56.5
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 4.3e-21 105.5 96 61.5
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 7.3e-21 104.8 110 54.5
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 7.3e-21 104.8 112 56.2
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 9.5e-21 104.4 108 56.5
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 1.2e-20 104.0 98 60.2
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 1.2e-20 104.0 104 55.8
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 1.6e-20 103.6 100 58.0
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 1.6e-20 103.6 94 59.6
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 1.6e-20 103.6 92 60.9
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 2.1e-20 103.2 108 56.5
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 2.1e-20 103.2 101 56.4
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 2.8e-20 102.8 109 55.0
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 2.8e-20 102.8 109 55.0
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 2.8e-20 102.8 96 60.4
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 3.6e-20 102.4 111 48.6
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 3.6e-20 102.4 107 56.1
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 3.6e-20 102.4 106 55.7
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 4.7e-20 102.1 106 55.7
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 4.7e-20 102.1 112 53.6
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 6.1e-20 101.7 56 82.1
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 6.1e-20 101.7 56 82.1
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 6.1e-20 101.7 114 52.6
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 8.0e-20 101.3 95 58.9
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 8.0e-20 101.3 104 54.8
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 8.0e-20 101.3 105 55.2
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 8.0e-20 101.3 102 55.9
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 1.0e-19 100.9 95 58.9
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 1.0e-19 100.9 95 58.9
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 1.0e-19 100.9 101 57.4
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 1.0e-19 100.9 94 58.5
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 1.4e-19 100.5 102 55.9
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 2.3e-19 99.8 105 51.4
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 3.0e-19 99.4 102 54.9
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 4.0e-19 99.0 106 55.7
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 4.0e-19 99.0 107 55.1
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 5.2e-19 98.6 113 54.9
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 6.8e-19 98.2 108 53.7
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 6.8e-19 98.2 93 59.1
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 8.9e-19 97.8 93 58.1
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 1.2e-18 97.4 107 54.2
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 1.2e-18 97.4 116 50.9
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 1.2e-18 97.4 119 51.3
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 2.0e-18 96.7 94 55.3
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 2.6e-18 96.3 93 59.1
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 2.6e-18 96.3 109 52.3
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 4.4e-18 95.5 84 61.9
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 7.5e-18 94.7 109 52.3
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 9.8e-18 94.4 58 75.9
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 9.8e-18 94.4 113 47.8
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 1.3e-17 94.0 93 57.0
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 1.7e-17 93.6 92 57.6
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 2.9e-17 92.8 101 49.5
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 3.7e-17 92.4 60 70.0
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 3.7e-17 92.4 64 67.2
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 4.9e-17 92.0 59 69.5
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 4.9e-17 92.0 87 64.4
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 6.4e-17 91.7 47 83.0
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 6.4e-17 91.7 70 65.7
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 1.1e-16 90.9 106 52.8
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 1.8e-16 90.1 111 50.5
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 1.8e-16 90.1 111 50.5
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 1.8e-16 90.1 116 50.9
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 2.4e-16 89.7 94 55.3
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 4.1e-16 89.0 109 50.5
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 5.4e-16 88.6 112 49.1
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 5.4e-16 88.6 109 49.5
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 7.0e-16 88.2 91 53.8
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 1.2e-15 87.4 106 50.9
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 1.3e-14 84.0 93 54.8
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 1.3e-14 84.0 93 54.8
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 1.3e-14 84.0 109 49.5
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 8.6e-14 81.3 70 62.9
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.1e-13 80.9 60 66.7
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 2.5e-13 79.7 109 49.5
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 1.4e-11 73.9 69 59.4
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 1.8e-11 73.6 69 59.4
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 8.9e-11 71.2 116 42.2
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 2.4e-08 63.2 47 63.8
A03p08530 Brassica napus HOM05D006906 ORTHO05D008578 3.5e-07 59.3 95 44.2
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 3.5e-07 59.3 65 55.4
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 1.0e-06 57.8 45 57.8
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 1.0e-06 57.8 37 73.0


User provided reference genes

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