Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 4.6e-82 308.1 190 100.0
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 2.2e-76 289.3 190 95.3
Dinv01174 Davidia involucrata HOM05D008623 ORTHO05D007789 7.6e-53 211.1 190 68.4
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 1.2e-37 160.6 115 69.6
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 1.9e-35 153.3 193 60.6
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 6.0e-34 148.3 109 66.1
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 7.2e-19 98.2 122 46.7
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.5e-16 90.5 115 43.5
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.5e-16 90.5 116 37.1
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 9.7e-16 87.8 116 36.2
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.3e-15 87.4 115 38.3
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.3e-15 87.4 115 38.3
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.7e-15 87.0 115 38.3
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.3e-15 85.1 116 42.2
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-14 84.3 116 41.4
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-14 84.0 120 41.7
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 2.4e-14 83.2 119 40.3
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 3.1e-14 82.8 119 39.5
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 4.1e-14 82.4 118 40.7
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 9.1e-14 81.3 119 40.3
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 9.1e-14 81.3 119 39.5
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 9.1e-14 81.3 119 39.5
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-13 80.1 119 38.7
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-13 80.1 119 38.7
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.4e-13 79.3 115 40.9
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 3.4e-13 79.3 120 38.3
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 4.5e-13 79.0 125 33.6
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 2.9e-12 76.3 132 37.1
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.0e-12 75.5 121 38.0
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.0e-12 75.5 119 39.5
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.5e-12 75.1 116 41.4
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.5e-12 75.1 105 41.0
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 6.5e-12 75.1 120 35.8
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 6.5e-12 75.1 108 41.7
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 8.5e-12 74.7 120 35.8
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-11 74.3 103 40.8
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-11 74.3 119 39.5
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.1e-11 74.3 117 36.8
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-11 73.9 119 38.7
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.4e-11 73.9 116 39.7
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 2.5e-11 73.2 117 34.2
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.5e-11 72.0 103 40.8
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.5e-11 72.0 119 37.8
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.2e-11 71.6 115 40.9
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 1.2e-10 70.9 118 40.7
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 1.2e-10 70.9 108 38.0
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 1.2e-10 70.9 108 38.0
Nitab4.5_0000613g0220 Nicotiana tabacum HOM05D010354 ORTHO05D012840 1.6e-10 70.5 125 33.6
PGR142G1144 Punica granatum HOM05D008623 ORTHO05D007789 1.6e-10 70.5 125 30.4
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 2.1e-10 70.1 120 34.2
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.7e-10 69.7 118 39.0
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.7e-10 69.7 118 38.1
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 2.7e-10 69.7 117 35.0
Rhsim06G0049300 Rhododendron simsii HOM05D031946 ORTHO05D007789 2.7e-10 69.7 125 36.0
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 3.6e-10 69.3 115 37.4
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 3.6e-10 69.3 121 37.2
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.6e-10 69.3 116 39.7
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.7e-10 68.9 122 36.1
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.9e-10 68.2 114 37.7
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.0e-09 67.8 118 37.3
Nitab4.5_0000559g0160 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.4e-09 67.4 113 35.4
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.8e-09 67.0 118 33.9
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.8e-09 67.0 116 34.5
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.3e-09 66.6 120 35.8
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.3e-09 66.6 103 38.8
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 2.3e-09 66.6 122 37.7
CAN.G762.6 Capsicum annuum HOM05D008623 ORTHO05D007789 2.3e-09 66.6 125 36.0
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.3e-09 66.6 117 33.3
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.3e-09 66.6 118 37.3
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 3.9e-09 65.9 132 34.1
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 3.9e-09 65.9 132 34.1
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 3.9e-09 65.9 120 34.2
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 3.9e-09 65.9 120 34.2
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 3.9e-09 65.9 122 37.7
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.1e-09 65.5 122 35.2
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 5.1e-09 65.5 119 36.1
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 5.1e-09 65.5 114 34.2
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.7e-09 65.1 136 31.6
CSS0046849 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.7e-09 65.1 92 42.4
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 6.7e-09 65.1 124 31.5
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.7e-09 65.1 118 36.4
Rhsim06G0038200 Rhododendron simsii HOM05D038451 ORTHO05D007789 6.7e-09 65.1 120 35.0
CSS0012798 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 8.8e-09 64.7 104 39.4
QL04p003256 Quercus lobata HOM05D019990 ORTHO05D007789 8.8e-09 64.7 129 36.4
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 8.8e-09 64.7 109 35.8
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-08 64.3 121 35.5
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-08 64.3 122 36.9
Duzib168G1555 Durio zibethinus HOM05D016489 ORTHO05D007789 1.1e-08 64.3 129 32.6
Rhsim06G0038400 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.1e-08 64.3 119 35.3
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.1e-08 64.3 117 38.5
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-08 63.9 125 36.0
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.5e-08 63.9 118 36.4
PGSC0003DMG401029222 Solanum tuberosum HOM05D008744 ORTHO05D010647 1.5e-08 63.9 118 31.4
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 2.0e-08 63.5 125 35.2
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 2.0e-08 63.5 125 35.2
CiPaw.09G138100 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.0e-08 63.5 118 36.4
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 2.0e-08 63.5 121 35.5
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 2.6e-08 63.2 125 35.2
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 2.6e-08 63.2 125 35.2
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.6e-08 63.2 136 32.4
Duzib168G1026 Durio zibethinus HOM05D016489 ORTHO05D007789 2.6e-08 63.2 129 32.6
Duzib168G2238 Durio zibethinus HOM05D016489 ORTHO05D007789 2.6e-08 63.2 129 32.6
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 3.3e-08 62.8 132 34.1
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.3e-08 62.8 101 35.6
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 3.3e-08 62.8 110 31.8
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.4e-08 62.4 122 33.6
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 4.4e-08 62.4 125 37.6
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 4.4e-08 62.4 126 36.5
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 5.7e-08 62.0 67 44.8
CiPaw.10G039400 Carya illinoinensis HOM05D010787 ORTHO05D011812 5.7e-08 62.0 124 39.5
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.4e-08 61.6 115 31.3
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 7.4e-08 61.6 105 32.4
Cc02_g14140 Coffea canephora HOM05D039367 ORTHO05D044651 9.7e-08 61.2 125 38.4
Cc02_g14170 Coffea canephora HOM05D039367 ORTHO05D044651 9.7e-08 61.2 125 38.4
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 9.7e-08 61.2 123 35.8
Sed0024472 Sechium edule HOM05D034586 ORTHO05D007789 9.7e-08 61.2 118 34.7
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-07 60.8 126 35.7
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-07 60.8 121 38.8
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 1.3e-07 60.8 125 34.4
Nitab4.5_0000556g0100 Nicotiana tabacum HOM05D010354 ORTHO05D012840 1.3e-07 60.8 111 35.1
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 1.7e-07 60.5 105 35.2
Sed0023023 Sechium edule HOM05D008623 ORTHO05D007789 1.7e-07 60.5 114 36.8
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-07 60.1 120 35.0
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-07 60.1 119 36.1
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-07 60.1 119 36.1
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 2.2e-07 60.1 116 39.7
CiPaw.09G138400 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.2e-07 60.1 103 36.9
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 2.2e-07 60.1 71 40.8
Solyc03g097080.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 2.2e-07 60.1 110 30.0
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.8e-07 59.7 72 43.1
arahy.Tifrunner.gnm1.ann1.J4CNX7 Arachis hypogaea HOM05D010841 ORTHO05D007789 3.7e-07 59.3 110 33.6
Sed0020637 Sechium edule HOM05D008623 ORTHO05D007789 3.7e-07 59.3 89 37.1
PGSC0003DMG400007626 Solanum tuberosum HOM05D008744 ORTHO05D010647 3.7e-07 59.3 118 30.5
arahy.Tifrunner.gnm1.ann1.JW8DXZ Arachis hypogaea HOM05D010841 ORTHO05D007789 6.3e-07 58.5 110 33.6
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.3e-07 58.5 131 34.4
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 8.2e-07 58.2 124 33.9
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 8.2e-07 58.2 124 33.9
Rhsim06G0060500 Rhododendron simsii HOM05D031946 ORTHO05D007789 8.2e-07 58.2 118 35.6
PGSC0003DMG400003145 Solanum tuberosum HOM05D008744 ORTHO05D010647 8.2e-07 58.2 110 30.9
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 8.2e-07 58.2 129 32.6
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.1e-06 57.8 124 32.3
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-06 57.8 119 35.3
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-06 57.8 124 33.1
Duzib187G1948 Durio zibethinus HOM05D016489 ORTHO05D007789 1.1e-06 57.8 80 36.2
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.4e-06 57.4 123 35.0
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 1.4e-06 57.4 121 33.9
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-06 57.4 112 35.7
Rhsim06G0044600 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.4e-06 57.4 120 28.3
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.4e-06 57.4 126 33.3
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-06 57.0 123 29.3
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-06 57.0 118 32.2
arahy.Tifrunner.gnm1.ann1.W55X99 Arachis hypogaea HOM05D010841 ORTHO05D007789 2.4e-06 56.6 86 38.4
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 2.4e-06 56.6 127 31.5
Dinv36278 Davidia involucrata HOM05D000519 ORTHO05D001210 2.4e-06 56.6 108 35.2
Peaxi162Scf00000g00013 Petunia axillaris HOM05D008744 ORTHO05D010647 2.4e-06 56.6 106 34.0
Peaxi162Scf00555g00913 Petunia axillaris HOM05D008744 ORTHO05D010647 2.4e-06 56.6 106 34.0
Rhsim12G0199500 Rhododendron simsii HOM05D000727 ORTHO05D000541 2.4e-06 56.6 123 32.5
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.1e-06 56.2 124 33.1
DCAR_022191 Daucus carota HOM05D014660 ORTHO05D016977 3.1e-06 56.2 113 31.0
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 3.1e-06 56.2 116 35.3
DCAR_027027 Daucus carota HOM05D014660 ORTHO05D016977 4.1e-06 55.8 95 32.6
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 4.1e-06 55.8 67 43.3
Rhsim06G0059100 Rhododendron simsii HOM05D031946 ORTHO05D007789 4.1e-06 55.8 99 34.3
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.1e-06 55.8 73 39.7
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 5.3e-06 55.5 123 29.3
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 5.3e-06 55.5 80 41.2
Cc02_g27330 Coffea canephora HOM05D008744 ORTHO05D010647 5.3e-06 55.5 113 31.9
Dinv25408 Davidia involucrata HOM05D000519 ORTHO05D035051 5.3e-06 55.5 112 34.8
Rhsim07G0120100 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.3e-06 55.5 111 36.9
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 9.1e-06 54.7 113 34.5
arahy.Tifrunner.gnm1.ann1.E31NWF Arachis hypogaea HOM05D010841 ORTHO05D007789 9.1e-06 54.7 108 35.2
arahy.Tifrunner.gnm1.ann1.U7E3JB Arachis hypogaea HOM05D010841 ORTHO05D007789 9.1e-06 54.7 86 37.2
DCAR_007960 Daucus carota HOM05D014660 ORTHO05D016977 9.1e-06 54.7 95 36.8


User provided reference genes

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