Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01017 Davidia involucrata HOM05D013973 ORTHO05D011238 1.8e-177 625.9 352 100.0
Dinv21131 Davidia involucrata HOM05D013973 ORTHO05D011238 2.2e-159 565.8 322 99.4
Dinv35882 Davidia involucrata HOM05D013973 ORTHO05D184949 7.4e-94 348.2 259 71.8
Dinv05367 Davidia involucrata HOM05D013973 ORTHO05D013263 1.2e-56 224.6 222 55.9
Dinv15899 Davidia involucrata HOM05D013973 ORTHO05D011238 1.7e-37 161.0 331 38.4
Rhsim04G0137200 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.9e-26 123.2 356 31.2
RhsimUnG0127700 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.0e-26 122.9 360 30.3
Rhsim02G0219500 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.5e-25 120.6 360 30.0
RhsimUnG0234800 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.1e-24 117.5 122 55.7
Rhsim04G0084200 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.6e-24 116.7 116 55.2
Dinv19667 Davidia involucrata HOM05D013973 ORTHO05D009195 1.3e-21 108.2 272 42.6
CSS0045728 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.3e-15 87.4 61 63.9
Rhsim05G0096600 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.0e-15 86.7 137 44.5
CSS0026734 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.2e-15 86.3 61 63.9
CSS0017579 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.8e-14 82.0 350 28.0
CSS0045108 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.2e-13 80.9 194 38.7
CSS0049353 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.9e-13 80.5 356 27.2
CSS0006701 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.7e-13 80.1 355 27.6
CSS0044422 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.9e-13 79.7 345 29.6
CSS0004804 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.1e-12 78.6 355 29.0
Actinidia31591 Actinidia chinensis HOM05D013973 ORTHO05D011238 1.2e-11 75.1 97 52.6
Rhsim02G0208900 Rhododendron simsii HOM05D013973 ORTHO05D000001 6.0e-11 72.8 325 28.9
Manes.06G045801 Manihot esculenta HOM05D012182 ORTHO05D011238 7.8e-11 72.4 59 57.6
Manes.14G163433 Manihot esculenta HOM05D012182 ORTHO05D011238 1.7e-10 71.2 48 60.4
Manes.15G153266 Manihot esculenta HOM05D012182 ORTHO05D011238 2.3e-10 70.9 81 44.4
Ah.03g144780 Amaranthus hybridus HOM05D000023 ORTHO05D000014 3.9e-10 70.1 135 35.6
Manes.14G027972 Manihot esculenta HOM05D012182 ORTHO05D000014 3.9e-10 70.1 48 58.3
Hund10834 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.9e-10 70.1 77 45.5
Duzib063G0003 Durio zibethinus HOM05D053098 ORTHO05D011238 5.1e-10 69.7 61 57.4
Manes.18G062550 Manihot esculenta HOM05D012182 ORTHO05D011238 5.1e-10 69.7 48 58.3
Manes.07G082254 Manihot esculenta HOM05D012182 ORTHO05D011238 8.6e-10 68.9 48 58.3
Ah.06g187040 Amaranthus hybridus HOM05D012182 ORTHO05D011238 1.1e-09 68.6 60 55.0
Manes.02G210140 Manihot esculenta HOM05D000023 ORTHO05D000014 1.1e-09 68.6 71 50.7
Hund04216 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.1e-09 68.6 63 50.8
Hund20069 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-09 67.4 62 51.6
Hund26432 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.3e-09 66.6 77 42.9
EL10Ac5g11571 Beta vulgaris HOM05D000023 ORTHO05D000014 5.6e-09 66.2 123 39.0
Manes.18G138854 Manihot esculenta HOM05D012182 ORTHO05D011238 5.6e-09 66.2 81 42.0
Psat1g136240 Pisum sativum HOM05D008981 ORTHO05D011238 5.6e-09 66.2 87 40.2
Hund03452 Selenicereus undatus HOM05D000185 ORTHO05D000014 5.6e-09 66.2 62 50.0
Manes.05G127901 Manihot esculenta HOM05D012182 ORTHO05D011238 7.3e-09 65.9 81 42.0
Hund01377 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.3e-09 65.9 118 39.8
Hund00853 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.5e-09 65.5 109 39.4
Hund09860 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.5e-09 65.5 118 39.8
Hund17738 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.8e-08 63.9 61 50.8
Hund22679 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.8e-08 63.9 119 38.7
Hund08340 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.7e-08 63.2 119 38.7
Hund25537 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.7e-08 63.2 62 48.4
Ah.13g070190 Amaranthus hybridus HOM05D013973 ORTHO05D011238 6.2e-08 62.8 89 43.8
Psat2g165840 Pisum sativum HOM05D008981 ORTHO05D011238 6.2e-08 62.8 97 36.1
Hund17894 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.2e-08 62.8 94 41.5
Hund04619 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.1e-08 62.4 77 40.3
Hund09827 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.1e-08 62.4 109 38.5
MBI15_g10635_MAGBIO Magnolia biondii HOM05D008550 ORTHO05D009195 1.8e-07 61.2 96 39.6
Hund09996 Selenicereus undatus HOM05D000023 ORTHO05D009195 1.8e-07 61.2 71 46.5
Hund18171 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.0e-07 60.1 63 46.0
Hund04087 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.2e-07 59.7 79 44.3
Hund13352 Selenicereus undatus HOM05D000023 ORTHO05D001383 5.2e-07 59.7 53 50.9
Hund23857 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.2e-07 59.7 87 35.6
Gohir.A01G142850 Gossypium hirsutum HOM05D000023 ORTHO05D000014 8.9e-07 58.9 77 44.2
Gohir.D08G172950 Gossypium hirsutum HOM05D001165 ORTHO05D001347 8.9e-07 58.9 101 38.6
Gorai.011G148700 Gossypium raimondii HOM05D000023 ORTHO05D000014 8.9e-07 58.9 101 38.6
Psat7g035080 Pisum sativum HOM05D008981 ORTHO05D011238 8.9e-07 58.9 64 45.3
Gorai.005G223300 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.5e-06 58.2 109 35.8
MBI12_g00592_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 4.4e-06 56.6 74 41.9
Hund13353 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.4e-06 56.6 56 50.0
TPR.G32077 Trifolium pratense HOM05D000023 ORTHO05D000014 4.4e-06 56.6 67 44.8
Gorai.010G071800 Gossypium raimondii HOM05D000023 ORTHO05D000014 5.8e-06 56.2 264 29.2
Hund15541 Selenicereus undatus HOM05D000023 ORTHO05D009195 5.8e-06 56.2 103 42.7


User provided reference genes

Program Settings