Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv00914 Davidia involucrata HOM05D007604 ORTHO05D008966 2.3e-63 245.4 122 100.0
Dinv17905 Davidia involucrata HOM05D007604 ORTHO05D008966 5.6e-33 144.4 109 70.6
Dinv13858 Davidia involucrata HOM05D007604 ORTHO05D008966 3.5e-27 125.2 68 89.7
Dinv29749 Davidia involucrata HOM05D007604 ORTHO05D008966 1.3e-26 123.2 113 61.1
Dinv03203 Davidia involucrata HOM05D007604 ORTHO05D008966 6.6e-26 120.9 69 78.3
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 5.3e-23 111.3 104 59.6
Dinv02016 Davidia involucrata HOM05D007604 ORTHO05D008966 1.7e-21 106.3 115 50.4
Rhsim13G0069300 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.1e-16 87.4 89 53.9
Rhsim08G0130100 Rhododendron simsii HOM05D000187 ORTHO05D000230 3.1e-15 85.5 87 51.7
vmacro08788 Vaccinium macrocarpon HOM05D000550 ORTHO05D000400 1.2e-14 83.6 90 50.0
Dinv10244 Davidia involucrata HOM05D007604 ORTHO05D008966 1.5e-14 83.2 89 56.2
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-14 83.2 68 64.7
vmacro23380 Vaccinium macrocarpon HOM05D007604 ORTHO05D008966 2.0e-14 82.8 64 64.1
Actinidia29263 Actinidia chinensis HOM05D000017 ORTHO05D000013 3.4e-14 82.0 69 59.4
Hma1.2p1_1264F.1_g271275 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.8e-14 81.3 69 59.4
Rhsim13G0068100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-13 79.7 91 46.2
Cc06_g15030 Coffea canephora HOM05D000017 ORTHO05D000013 2.2e-13 79.3 55 70.9
Dinv05095 Davidia involucrata HOM05D007604 ORTHO05D008966 2.2e-13 79.3 91 51.6
Rhsim04G0059700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.8e-13 78.6 100 50.0
CSS0030640 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.2e-12 75.5 65 53.8
CSS0005205 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.1e-12 74.3 83 48.2
CSS0012263 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.1e-12 74.3 83 48.2
Rhsim06G0119600 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-11 73.6 124 40.3
CSS0039812 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-11 73.2 65 52.3
Dinv05752 Davidia involucrata HOM05D007604 ORTHO05D008966 6.0e-11 71.2 59 64.4
Peaxi162Scf00070g00037 Petunia axillaris HOM05D000017 ORTHO05D000013 3.9e-10 68.6 55 58.2
Lj2g0013559 Lotus japonicus HOM05D000017 ORTHO05D000013 1.1e-09 67.0 62 54.8
Ca_13798_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 1.5e-09 66.6 64 48.4
Rhsim08G0098700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.9e-09 66.2 64 50.0
Hma1.2p1_0104F.1_g050035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.5e-09 65.9 56 60.7
Ca_04121_v3 Cicer arietinum L. HOM05D008026 ORTHO05D011894 3.3e-09 65.5 64 48.4
CSS0043105 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.6e-09 63.9 89 43.8
Actinidia13947 Actinidia chinensis HOM05D041779 ORTHO05D008966 2.1e-08 62.8 73 45.2
Hma1.2p1_0472F.1_g159930 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-08 62.8 85 47.1
Lj3g0025866 Lotus japonicus HOM05D000017 ORTHO05D000013 2.1e-08 62.8 59 54.2
Ca_26785_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 3.7e-08 62.0 56 53.6
Dinv26433 Davidia involucrata HOM05D000017 ORTHO05D000013 4.8e-08 61.6 76 46.1
CSS0021221 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.2e-08 61.2 93 38.7
CSS0026530 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.2e-08 61.2 93 38.7
Dinv20252 Davidia involucrata HOM05D007604 ORTHO05D008966 8.1e-08 60.8 43 65.1
Hma1.2p1_1816F.1_g303950 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.1e-08 60.8 85 45.9
Medtr3g049490 Medicago truncatula HOM05D008026 ORTHO05D011894 1.4e-07 60.1 94 42.6
Dinv06075 Davidia involucrata HOM05D000017 ORTHO05D000013 5.3e-07 58.2 70 45.7
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.9e-07 57.8 67 50.7
Dinv09533 Davidia involucrata HOM05D000017 ORTHO05D011894 1.2e-06 57.0 106 39.6
Sed0005941 Sechium edule HOM05D000017 ORTHO05D000013 1.2e-06 57.0 69 47.8
Ca_19677_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 2.0e-06 56.2 64 42.2
Ca_19093_v3 Cicer arietinum L. HOM05D008026 ORTHO05D011894 5.8e-06 54.7 62 43.5
Hma1.2p1_0048F.1_g028050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.6e-06 54.3 104 37.5
Glyma.04G103933 Glycine max HOM05D007604 ORTHO05D008966 1.0e-05 53.9 57 50.9
Hma1.2p1_0361F.1_g135970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-05 53.9 60 53.3


User provided reference genes

Program Settings