Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv00697 Davidia involucrata HOM05D008893 ORTHO05D000352 8.4e-102 373.6 181 100.0
Dinv08868 Davidia involucrata HOM05D008893 ORTHO05D000352 2.9e-46 189.1 141 66.7
Dinv04604 Davidia involucrata HOM05D008893 ORTHO05D000352 8.9e-43 177.6 103 79.6
Dinv11348 Davidia involucrata HOM05D008893 ORTHO05D000352 6.3e-41 171.4 194 52.1
Dinv40638 Davidia involucrata HOM05D008893 ORTHO05D001383 5.0e-38 161.8 441 31.1
Dinv03275 Davidia involucrata HOM05D008893 ORTHO05D000352 9.5e-37 157.5 284 37.3
Dinv01614 Davidia involucrata HOM05D008893 ORTHO05D001383 1.1e-21 107.5 62 85.5
Dinv08376 Davidia involucrata HOM05D008893 ORTHO05D001383 3.1e-19 99.4 68 72.1
Dinv11404 Davidia involucrata HOM05D008893 ORTHO05D001383 3.1e-19 99.4 59 79.7
Dinv09573 Davidia involucrata HOM05D008893 ORTHO05D000352 5.2e-19 98.6 79 62.0
CSS0007020 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 1.5e-18 97.1 106 45.3
CSS0009928 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 1.5e-18 97.1 106 45.3
CSS0012350 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 2.0e-18 96.7 136 39.0
CSS0050128 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.0e-18 96.7 136 39.0
CSS0021665 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.6e-18 96.3 104 44.2
CSS0026534 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 4.4e-18 95.5 110 40.0
CSS0024084 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.8e-18 95.1 136 37.5
CSS0039695 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.8e-18 95.1 129 41.9
CSS0040965 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.8e-18 95.1 136 38.2
CSS0047702 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 1.3e-17 94.0 109 40.4
CSS0010649 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 2.9e-17 92.8 109 39.4
CANSAT25G2429 Cannabis sativa HOM05D000047 ORTHO05D001383 5.4e-16 88.6 106 42.5
Rhsim10G0123700 Rhododendron simsii HOM05D000429 ORTHO05D000352 7.1e-16 88.2 105 41.9
PSO339G5462 Papaver somniferum HOM05D000047 ORTHO05D001383 9.2e-16 87.8 138 34.1
CSS0023078 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.2e-15 87.4 109 39.4
CSS0032140 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 1.2e-15 87.4 107 39.3
RhsimUnG0112200 Rhododendron simsii HOM05D008893 ORTHO05D001383 3.5e-15 85.9 105 41.0
CSS0017450 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.0e-15 85.1 109 38.5
PSO478G3296 Papaver somniferum HOM05D000047 ORTHO05D000352 1.3e-14 84.0 157 32.5
Dinv05873 Davidia involucrata HOM05D008893 ORTHO05D001383 1.7e-14 83.6 55 74.5
CSS0001468 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 8.6e-14 81.3 101 40.6
CSS0018904 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 2.5e-13 79.7 136 32.4
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.3e-13 79.0 143 32.2
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.3e-13 79.0 143 32.2
Dinv08867 Davidia involucrata HOM05D008893 ORTHO05D001383 9.6e-13 77.8 55 69.1
Dinv06459 Davidia involucrata HOM05D008893 ORTHO05D001383 1.2e-12 77.4 43 79.1
Dinv31202 Davidia involucrata HOM05D008893 ORTHO05D000352 1.2e-12 77.4 47 72.3
Sabra02G0006200 Salix brachista HOM05D000047 ORTHO05D006662 2.1e-12 76.6 129 32.6
Sabra02G0068300 Salix brachista HOM05D000047 ORTHO05D006662 2.1e-12 76.6 129 32.6
Sabra10G0009400 Salix brachista HOM05D000047 ORTHO05D006662 2.1e-12 76.6 129 32.6
Sabra15G0033900 Salix brachista HOM05D000047 ORTHO05D006662 2.1e-12 76.6 129 32.6
Sabra16G0019500 Salix brachista HOM05D000047 ORTHO05D006662 2.1e-12 76.6 129 32.6
Dinv03978 Davidia involucrata HOM05D008893 ORTHO05D001383 2.8e-12 76.3 55 65.5
FvH4_3g31360 Fragaria vesca HOM05D002894 ORTHO05D002579 8.1e-12 74.7 142 32.4
PSO017G0938 Papaver somniferum HOM05D009560 ORTHO05D001383 8.1e-12 74.7 103 38.8
PSO017G3651 Papaver somniferum HOM05D009560 ORTHO05D001383 8.1e-12 74.7 103 38.8
Sabra03G0013200 Salix brachista HOM05D000047 ORTHO05D000352 8.1e-12 74.7 85 40.0
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 1.1e-11 74.3 151 29.1
Sabra18G0063000 Salix brachista HOM05D000047 ORTHO05D000352 1.1e-11 74.3 114 34.2
CSS0037721 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 1.4e-11 73.9 109 34.9
Oeu027711.1 Olea europaea HOM05D009708 ORTHO05D000352 1.4e-11 73.9 133 32.3
PSO421G0419 Papaver somniferum HOM05D000047 ORTHO05D000352 1.4e-11 73.9 97 39.2
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.4e-11 73.9 138 31.9
Sabra03G0012900 Salix brachista HOM05D000047 ORTHO05D006662 1.4e-11 73.9 114 34.2
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 1.8e-11 73.6 151 29.1
Sabra06G0040800 Salix brachista HOM05D000047 ORTHO05D006662 1.8e-11 73.6 114 34.2
Sabra16G0121600 Salix brachista HOM05D000047 ORTHO05D006662 1.8e-11 73.6 123 31.7
Sabra16G0323100 Salix brachista HOM05D000047 ORTHO05D006662 1.8e-11 73.6 123 31.7
Sabra17G0000400 Salix brachista HOM05D000047 ORTHO05D006662 1.8e-11 73.6 114 34.2
Oeu026299.1 Olea europaea HOM05D009708 ORTHO05D006662 2.4e-11 73.2 106 34.9
PSO541G3941 Papaver somniferum HOM05D009560 ORTHO05D000352 2.4e-11 73.2 80 45.0
PSO591G0406 Papaver somniferum HOM05D009560 ORTHO05D001383 2.4e-11 73.2 103 39.8
Sabra05G0005700 Salix brachista HOM05D000047 ORTHO05D006662 2.4e-11 73.2 114 34.2
FvH4_4g22271 Fragaria vesca HOM05D000047 ORTHO05D001383 3.1e-11 72.8 147 31.3
Oeu023413.1 Olea europaea HOM05D009708 ORTHO05D006662 4.0e-11 72.4 133 32.3
Oeu040306.1 Olea europaea HOM05D009708 ORTHO05D000352 5.2e-11 72.0 130 31.5
Sabra16G0041700 Salix brachista HOM05D000047 ORTHO05D000044 5.2e-11 72.0 114 33.3
QL07p033801 Quercus lobata HOM05D000047 ORTHO05D000044 6.8e-11 71.6 87 39.1
Sabra16G0088500 Salix brachista HOM05D000047 ORTHO05D006662 6.8e-11 71.6 85 37.6
FvH4_7g03661 Fragaria vesca HOM05D000047 ORTHO05D001383 8.9e-11 71.2 151 28.5
Sopen12g026460 Solanum pennellii HOM05D000047 ORTHO05D001383 8.9e-11 71.2 86 38.4
Sabra01G0113900 Salix brachista HOM05D000047 ORTHO05D000044 1.2e-10 70.9 121 31.4
Oeu003900.1 Olea europaea HOM05D009708 ORTHO05D006662 1.5e-10 70.5 133 31.6
PSO063G2943 Papaver somniferum HOM05D000047 ORTHO05D000352 1.5e-10 70.5 77 41.6
Sabra17G0071200 Salix brachista HOM05D000047 ORTHO05D006662 2.0e-10 70.1 94 33.0
Sopen09g010930 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-10 70.1 138 29.7
Dinv40330 Davidia involucrata HOM05D008893 ORTHO05D001383 2.6e-10 69.7 42 78.6
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 2.6e-10 69.7 86 37.2
Sopen06g006560 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-10 69.7 83 41.0
PSO170G0084 Papaver somniferum HOM05D000047 ORTHO05D000352 3.4e-10 69.3 98 35.7
Sopen09g024050 Solanum pennellii HOM05D000047 ORTHO05D001383 3.4e-10 69.3 86 37.2
Sabra17G0115600 Salix brachista HOM05D000047 ORTHO05D006662 4.4e-10 68.9 114 32.5
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 4.4e-10 68.9 86 37.2
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 5.8e-10 68.6 86 37.2
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 5.8e-10 68.6 86 37.2
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 5.8e-10 68.6 86 37.2
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 5.8e-10 68.6 86 37.2
Sopen08g015290 Solanum pennellii HOM05D000047 ORTHO05D001383 5.8e-10 68.6 86 37.2
Hma1.2p1_0018F.1_g013005 Hydrangea macrophylla HOM05D000047 ORTHO05D000352 7.6e-10 68.2 85 36.5
Hma1.2p1_0253F.1_g102990 Hydrangea macrophylla HOM05D000047 ORTHO05D000352 7.6e-10 68.2 85 36.5
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 7.6e-10 68.2 86 37.2
Dinv23995 Davidia involucrata HOM05D008893 ORTHO05D001383 9.9e-10 67.8 39 82.1
QL02p080030 Quercus lobata HOM05D000047 ORTHO05D000044 9.9e-10 67.8 143 28.7
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 9.9e-10 67.8 143 28.7
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 9.9e-10 67.8 143 28.7
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 9.9e-10 67.8 143 28.7
Sopen01g018390 Solanum pennellii HOM05D000047 ORTHO05D000044 9.9e-10 67.8 86 36.0
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 9.9e-10 67.8 86 36.0
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 9.9e-10 67.8 86 36.0
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 9.9e-10 67.8 86 36.0
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 9.9e-10 67.8 86 36.0
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 9.9e-10 67.8 86 36.0
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 9.9e-10 67.8 86 36.0
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 9.9e-10 67.8 86 36.0
PGSC0003DMG400041468 Solanum tuberosum HOM05D000047 ORTHO05D001383 9.9e-10 67.8 86 37.2
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 1.7e-09 67.0 132 31.1
Sopen02g002100 Solanum pennellii HOM05D000047 ORTHO05D001383 1.7e-09 67.0 86 36.0
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 1.7e-09 67.0 86 36.0
Oeu060302.1 Olea europaea HOM05D009708 ORTHO05D006662 2.9e-09 66.2 93 33.3
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 2.9e-09 66.2 143 28.0
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 2.9e-09 66.2 143 28.0
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 2.9e-09 66.2 143 28.0
Sabra17G0112700 Salix brachista HOM05D000047 ORTHO05D006662 2.9e-09 66.2 106 33.0
PSO063G3669 Papaver somniferum HOM05D009560 ORTHO05D001383 3.8e-09 65.9 83 37.3
PSO210G7809 Papaver somniferum HOM05D000047 ORTHO05D000352 3.8e-09 65.9 92 34.8
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 3.8e-09 65.9 98 34.7
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 3.8e-09 65.9 86 34.9
PSO478G2739 Papaver somniferum HOM05D000047 ORTHO05D000352 4.9e-09 65.5 92 37.0
QL07p017311 Quercus lobata HOM05D000047 ORTHO05D000044 6.4e-09 65.1 137 28.5
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 8.4e-09 64.7 143 28.0
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 8.4e-09 64.7 143 28.0
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 8.4e-09 64.7 143 28.0
Hma1.2p1_0124F.1_g058270 Hydrangea macrophylla HOM05D008893 ORTHO05D001383 1.1e-08 64.3 76 42.1
MBI09_g13281_MAGBIO Magnolia biondii HOM05D007668 ORTHO05D006662 1.1e-08 64.3 85 32.9
MBI09_g16712_MAGBIO Magnolia biondii HOM05D007668 ORTHO05D006662 1.1e-08 64.3 83 34.9
FvH4_3g26703 Fragaria vesca HOM05D000047 ORTHO05D008839 1.9e-08 63.5 85 36.5
Dinv11563 Davidia involucrata HOM05D000429 ORTHO05D000352 2.4e-08 63.2 87 35.6
MBI05_g16552_MAGBIO Magnolia biondii HOM05D000047 ORTHO05D006662 2.4e-08 63.2 83 36.1
Sopen06g006910 Solanum pennellii HOM05D000047 ORTHO05D001383 2.4e-08 63.2 74 37.8
MBI06_g04140_MAGBIO Magnolia biondii HOM05D000047 ORTHO05D006662 3.2e-08 62.8 82 35.4
PSO384G1496 Papaver somniferum HOM05D000047 ORTHO05D001383 3.2e-08 62.8 95 34.7
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 4.2e-08 62.4 86 33.7
MBI14_g09787_MAGBIO Magnolia biondii HOM05D007668 ORTHO05D006662 7.1e-08 61.6 85 30.6
PSO675G1725 Papaver somniferum HOM05D004552 ORTHO05D005501 7.1e-08 61.6 110 34.5
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 7.1e-08 61.6 92 34.8
Oeu013377.1 Olea europaea HOM05D009708 ORTHO05D006662 9.3e-08 61.2 106 31.1
PSO384G4080 Papaver somniferum HOM05D000047 ORTHO05D000352 9.3e-08 61.2 69 42.0
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 9.3e-08 61.2 95 33.7
Oeu002233.1 Olea europaea HOM05D009708 ORTHO05D006662 1.2e-07 60.8 74 36.5
Oeu036717.1 Olea europaea HOM05D009708 ORTHO05D006662 1.2e-07 60.8 86 33.7
PSO063G1889 Papaver somniferum HOM05D000047 ORTHO05D000044 1.2e-07 60.8 69 42.0
Rhsim07G0161100 Rhododendron simsii HOM05D008893 ORTHO05D001383 1.2e-07 60.8 63 42.9
Oeu048711.1 Olea europaea HOM05D009708 ORTHO05D006662 2.1e-07 60.1 106 35.8
FAN09G1956 Fragaria x ananassa HOM05D015769 ORTHO05D014192 4.6e-07 58.9 88 38.6
PSO135G0279 Papaver somniferum HOM05D000047 ORTHO05D000352 4.6e-07 58.9 98 33.7
MBI16_g04042_MAGBIO Magnolia biondii HOM05D007668 ORTHO05D006662 6.0e-07 58.5 85 30.6
Sopen04g021440 Solanum pennellii HOM05D000309 ORTHO05D001383 7.8e-07 58.2 86 34.9
Oeu017956.1 Olea europaea HOM05D009708 ORTHO05D000352 1.0e-06 57.8 107 31.8
Sopen02g007630 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-06 57.4 95 34.7
PSO761G0028 Papaver somniferum HOM05D009560 ORTHO05D001383 3.0e-06 56.2 72 38.9
FvH4_4g14568 Fragaria vesca HOM05D015769 ORTHO05D000352 3.9e-06 55.8 40 60.0
Rhsim02G0166900 Rhododendron simsii HOM05D000047 ORTHO05D000352 3.9e-06 55.8 149 29.5
Sed0007224 Sechium edule HOM05D010179 ORTHO05D008839 3.9e-06 55.8 123 28.5
Sed0009966 Sechium edule HOM05D010179 ORTHO05D008839 3.9e-06 55.8 123 28.5
Sed0016844 Sechium edule HOM05D010179 ORTHO05D008839 3.9e-06 55.8 123 28.5
vmacro05258 Vaccinium macrocarpon HOM05D003452 ORTHO05D004046 3.9e-06 55.8 121 28.9
MBI16_g13216_MAGBIO Magnolia biondii HOM05D007668 ORTHO05D006662 6.6e-06 55.1 63 38.1
MBI19_g35091_MAGBIO Magnolia biondii HOM05D007668 ORTHO05D006662 6.6e-06 55.1 85 30.6
PSO541G6204 Papaver somniferum HOM05D009560 ORTHO05D001383 6.6e-06 55.1 68 39.7
Hma1.2p1_3902F.1_g337930 Hydrangea macrophylla HOM05D008893 ORTHO05D001383 8.7e-06 54.7 77 32.5
Sed0011657 Sechium edule HOM05D010179 ORTHO05D008839 8.7e-06 54.7 123 27.6
Sopen05g014910 Solanum pennellii HOM05D000047 ORTHO05D010949 8.7e-06 54.7 162 21.6


User provided reference genes

Program Settings