Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv00475 Davidia involucrata HOM05D007194 ORTHO05D009182 3.0e-88 328.6 172 100.0
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 4.3e-55 218.4 120 96.7
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 3.8e-11 72.4 36 94.4
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 3.8e-11 72.4 36 94.4
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 6.5e-11 71.6 68 61.8
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 1.9e-10 70.1 35 94.3
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 3.2e-10 69.3 35 91.4
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 3.2e-10 69.3 62 58.1
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 5.5e-10 68.6 35 91.4
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 9.4e-10 67.8 35 91.4
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 9.4e-10 67.8 35 91.4
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 9.4e-10 67.8 35 91.4
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 9.4e-10 67.8 35 91.4
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 1.2e-09 67.4 35 91.4
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 1.6e-09 67.0 35 91.4
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 2.1e-09 66.6 35 91.4
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 2.7e-09 66.2 35 91.4
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 2.7e-09 66.2 35 91.4
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 2.7e-09 66.2 35 91.4
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 2.7e-09 66.2 35 91.4
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 2.7e-09 66.2 35 91.4
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 2.7e-09 66.2 35 91.4
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 2.7e-09 66.2 35 91.4
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 2.7e-09 66.2 35 91.4
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 2.7e-09 66.2 35 91.4
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 2.7e-09 66.2 35 88.6
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 4.7e-09 65.5 36 83.3
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 6.1e-09 65.1 35 88.6
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 6.1e-09 65.1 35 88.6
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 6.1e-09 65.1 35 88.6
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 8.0e-09 64.7 35 88.6
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 1.4e-08 63.9 35 85.7
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 1.8e-08 63.5 35 85.7
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 3.0e-08 62.8 35 85.7
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.9e-08 62.4 67 56.7
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.2e-08 62.0 35 85.7
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 8.8e-08 61.2 35 82.9
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 1.1e-07 60.8 35 85.7
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 2.0e-07 60.1 35 82.9
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 2.0e-07 60.1 34 82.4
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 2.6e-07 59.7 35 82.9
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 9.7e-07 57.8 41 73.2
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 8.2e-06 54.7 35 77.1


User provided reference genes

Program Settings