Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv00449 Davidia involucrata HOM05D000082 ORTHO05D008126 5.6e-108 394.8 286 100.0
Dinv06195 Davidia involucrata HOM05D000082 ORTHO05D008126 1.4e-103 380.2 279 100.0
CSS0010644 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D008126 1.3e-16 91.3 153 47.1
CiPaw.04G134800 Carya illinoinensis HOM05D000082 ORTHO05D008126 5.0e-16 89.4 109 48.6
Aqoxy1G01989 Aquilegia oxysepala HOM05D000082 ORTHO05D008126 3.2e-15 86.7 131 44.3
Nitab4.5_0005922g0040 Nicotiana tabacum HOM05D000082 ORTHO05D008126 2.8e-14 83.6 164 38.4
Nitab4.5_0000249g0020 Nicotiana tabacum HOM05D000082 ORTHO05D008126 1.0e-13 81.6 109 48.6
QL08p042523 Quercus lobata HOM05D000082 ORTHO05D008126 1.0e-13 81.6 137 43.8
CSS0019147 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D008126 6.8e-13 79.0 110 55.5
CSS0023801 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D008126 6.8e-13 79.0 110 55.5
RhsimUnG0091400 Rhododendron simsii HOM05D000082 ORTHO05D008126 3.4e-12 76.6 161 39.1
TAR627G0325 Trochodendron aralioides HOM05D000082 ORTHO05D008126 4.4e-12 76.3 116 44.8
Actinidia24404 Actinidia chinensis HOM05D000082 ORTHO05D008126 9.8e-12 75.1 108 50.0
MD17G1263500 Malus domestica HOM05D000082 ORTHO05D008126 2.2e-11 73.9 112 41.1
Atru.chr6.2754 Acer truncatum HOM05D000082 ORTHO05D008126 2.8e-11 73.6 177 36.7
CSS0043206 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D008126 2.8e-11 73.6 110 52.7
LjContig00564g0018787 Lotus japonicus HOM05D000082 ORTHO05D008126 3.7e-11 73.2 112 45.5
Peaxi162Scf00469g00628 Petunia axillaris HOM05D000082 ORTHO05D008126 3.7e-11 73.2 107 44.9
GSVIVG01020764001 Vitis vinifera HOM05D000082 ORTHO05D008126 4.9e-11 72.8 123 38.2
GSVIVG01020765001 Vitis vinifera HOM05D000082 ORTHO05D008126 8.3e-11 72.0 97 46.4
Manes.13G152000 Manihot esculenta HOM05D000082 ORTHO05D008126 1.1e-10 71.6 152 34.9
MD09G1234400 Malus domestica HOM05D000082 ORTHO05D008126 1.8e-10 70.9 105 46.7
Dinv24587 Davidia involucrata HOM05D000082 ORTHO05D008126 3.1e-10 70.1 92 53.3
Duzib251G0775 Durio zibethinus HOM05D000082 ORTHO05D008126 3.1e-10 70.1 150 36.0
LjContig00564g0011853 Lotus japonicus HOM05D000082 ORTHO05D008126 3.1e-10 70.1 114 46.5
AUR62040429 Chenopodium quinoa HOM05D000082 ORTHO05D008126 4.1e-10 69.7 111 39.6
Potri.014G139400 Populus trichocarpa HOM05D000082 ORTHO05D008126 4.1e-10 69.7 112 41.1
Sc12g0003130 Simmondsia chinensis HOM05D000082 ORTHO05D008126 9.2e-10 68.6 113 39.8
Lj3g0022065 Lotus japonicus HOM05D000082 ORTHO05D008126 1.2e-09 68.2 105 45.7
DCAR_009780 Daucus carota HOM05D000082 ORTHO05D008126 1.6e-09 67.8 108 40.7
Thecc.02G213000 Theobroma cacao HOM05D000082 ORTHO05D008126 2.7e-09 67.0 117 43.6
Ciclev10016257m.g Citrus clementina HOM05D000082 ORTHO05D008126 5.9e-09 65.9 119 38.7
arahy.Tifrunner.gnm1.ann1.05YYMQ Arachis hypogaea HOM05D000082 ORTHO05D008126 1.7e-08 64.3 107 38.3
Hma1.2p1_0178F.1_g078460 Hydrangea macrophylla HOM05D000082 ORTHO05D008126 1.7e-08 64.3 118 38.1
AUR62024042 Chenopodium quinoa HOM05D000082 ORTHO05D008126 2.3e-08 63.9 111 36.9
PSO541G4641 Papaver somniferum HOM05D000082 ORTHO05D008126 2.3e-08 63.9 120 37.5
PSO541G1470 Papaver somniferum HOM05D000082 ORTHO05D008126 2.9e-08 63.5 120 37.5
EL10Ac9g20992 Beta vulgaris HOM05D000082 ORTHO05D008126 8.6e-08 62.0 113 39.8
Cc05_g08660 Coffea canephora HOM05D000082 ORTHO05D008126 1.1e-07 61.6 110 36.4
PGR042G1135 Punica granatum HOM05D000082 ORTHO05D008126 1.1e-07 61.6 89 44.9
arahy.Tifrunner.gnm1.ann1.W39MEW Arachis hypogaea HOM05D000082 ORTHO05D008126 1.5e-07 61.2 107 37.4
PSO675G7308 Papaver somniferum HOM05D000082 ORTHO05D008126 1.5e-07 61.2 120 35.8
PGSC0003DMG400017312 Solanum tuberosum HOM05D000082 ORTHO05D008126 2.5e-07 60.5 105 40.0
EL10Ac7g17334 Beta vulgaris HOM05D000082 ORTHO05D008126 5.6e-07 59.3 102 38.2
Prupe.3G112600 Prunus persica HOM05D000082 ORTHO05D008126 7.3e-07 58.9 115 38.3
CDE10G0628 Ceratophyllum demersum HOM05D000082 ORTHO05D008126 4.7e-06 56.2 130 35.4


User provided reference genes

Program Settings