Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032543 Daucus carota HOM05D000533 ORTHO05D010350 1.9e-41 172.2 91 100.0
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 4.2e-33 144.4 90 84.4
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 4.2e-33 144.4 90 84.4
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 4.2e-33 144.4 90 84.4
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 4.2e-33 144.4 90 84.4
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 4.2e-33 144.4 90 84.4
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 4.2e-33 144.4 90 84.4
Gohir.D11G334200 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.7e-32 141.7 91 75.8
Gohir.A01G140394 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.0e-31 138.3 89 76.4
BolC7t43859H Brassica oleracea HOM05D000533 ORTHO05D010350 6.7e-31 137.1 88 83.0
PGR111G0065 Punica granatum HOM05D000533 ORTHO05D010350 6.7e-31 137.1 88 77.3
BolC2t10602H Brassica oleracea HOM05D000533 ORTHO05D010350 8.7e-31 136.7 88 83.0
BolSC29t60511H Brassica oleracea HOM05D000533 ORTHO05D010350 8.7e-31 136.7 88 83.0
BolSC35t60709H Brassica oleracea HOM05D000533 ORTHO05D010350 8.7e-31 136.7 88 83.0
BolSC37t60798H Brassica oleracea HOM05D000533 ORTHO05D010350 8.7e-31 136.7 88 83.0
BraSC138t45530Z Brassica rapa HOM05D000533 ORTHO05D010350 8.7e-31 136.7 88 83.0
BraSC143t45655Z Brassica rapa HOM05D000533 ORTHO05D010350 8.7e-31 136.7 88 83.0
BraSC25t45915Z Brassica rapa HOM05D000533 ORTHO05D010350 8.7e-31 136.7 88 83.0
BraSC59t46555Z Brassica rapa HOM05D000533 ORTHO05D010350 8.7e-31 136.7 88 83.0
Gohir.A04G053052 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.1e-30 136.3 88 75.0
Oeu058352.1 Olea europaea HOM05D000533 ORTHO05D010350 3.3e-30 134.8 88 77.3
Sed0000963 Sechium edule HOM05D000533 ORTHO05D010350 4.3e-30 134.4 88 76.1
CARHR282480 Cardamine hirsuta HOM05D000533 ORTHO05D010350 5.6e-30 134.0 88 80.7
BolSC35t60687H Brassica oleracea HOM05D000533 ORTHO05D010350 7.4e-30 133.7 88 80.7
Potri.012G027700 Populus trichocarpa HOM05D000533 ORTHO05D010350 9.6e-30 133.3 88 76.1
PGSC0003DMG400029905 Solanum tuberosum HOM05D000533 ORTHO05D010350 9.6e-30 133.3 88 79.5
ATCG01120 Arabidopsis thaliana HOM05D000533 ORTHO05D010350 4.8e-29 131.0 88 79.5
RcHm_v2.0_Chr3g0470821 Rosa chinensis HOM05D000533 ORTHO05D010350 6.2e-29 130.6 88 72.7
Nn1g08630 Nelumbo nucifera HOM05D000533 ORTHO05D010350 8.2e-29 130.2 88 77.3
CAN.G1470.7 Capsicum annuum HOM05D000533 ORTHO05D010350 4.0e-28 127.9 88 76.1
CAN.G965.2 Capsicum annuum HOM05D000533 ORTHO05D010350 4.0e-28 127.9 88 76.1
Eucgr.C01838 Eucalyptus grandis HOM05D000533 ORTHO05D010350 9.0e-28 126.7 77 80.5
Gohir.1Z049594 Gossypium hirsutum HOM05D000533 ORTHO05D010350 9.0e-28 126.7 78 78.2
Gohir.1Z050566 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.5e-27 125.9 79 78.5
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 1.5e-27 125.9 88 70.5
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 1.5e-27 125.9 88 70.5
Gohir.A13G086380 Gossypium hirsutum HOM05D000533 ORTHO05D010350 7.6e-27 123.6 79 77.2
Lalb_Chr07g0191831 Lupinus albus HOM05D000533 ORTHO05D010350 1.3e-26 122.9 89 73.0
Gorai.013G128500 Gossypium raimondii HOM05D000533 ORTHO05D010350 2.2e-26 122.1 79 75.9
MD12G1237700 Malus domestica HOM05D000533 ORTHO05D010350 2.2e-26 122.1 82 74.4
Lalb_Chr15g0080711 Lupinus albus HOM05D000533 ORTHO05D010350 4.9e-26 120.9 89 71.9
MD09G1289300 Malus domestica HOM05D000533 ORTHO05D010350 6.5e-26 120.6 79 77.2
Gohir.D06G106350 Gossypium hirsutum HOM05D000533 ORTHO05D010350 8.4e-26 120.2 82 72.0
Gorai.006G055100 Gossypium raimondii HOM05D000533 ORTHO05D010350 1.1e-25 119.8 83 72.3
Lalb_Chr20g0108591 Lupinus albus HOM05D000533 ORTHO05D010350 1.1e-25 119.8 89 71.9
Medtr0002s0210 Medicago truncatula HOM05D000533 ORTHO05D010350 1.1e-25 119.8 75 78.7
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.2e-25 118.2 88 67.0
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.2e-25 118.2 88 67.0
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.2e-25 118.2 88 67.0
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.2e-25 118.2 88 67.0
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.2e-25 118.2 88 67.0
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.3e-25 116.7 86 67.4
Gohir.D13G114450 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.5e-24 114.8 79 73.4
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 3.5e-24 114.8 72 83.3
Gohir.D11G237260 Gossypium hirsutum HOM05D000533 ORTHO05D010350 7.9e-24 113.6 76 72.4
Lalb_Chr03g0030911 Lupinus albus HOM05D000533 ORTHO05D010350 1.0e-23 113.2 82 73.2
Medtr4g006090 Medicago truncatula HOM05D000533 ORTHO05D010350 1.8e-23 112.5 89 68.5
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 5.1e-23 110.9 81 65.4
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 8.7e-23 110.2 63 90.5
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.5e-22 109.4 83 66.3
Medtr6g042190 Medicago truncatula HOM05D000533 ORTHO05D010350 2.5e-22 108.6 89 66.3
BolC9t56911H Brassica oleracea HOM05D000533 ORTHO05D010350 9.7e-22 106.7 70 81.4
Gorai.011G221100 Gossypium raimondii HOM05D000533 ORTHO05D010350 1.3e-21 106.3 72 72.2
BolSC49t61148H Brassica oleracea HOM05D000533 ORTHO05D010350 3.7e-21 104.8 75 74.7
MD08G1073600 Malus domestica HOM05D000533 ORTHO05D010350 4.8e-21 104.4 67 76.1
Peaxi162Scf00030g02115 Petunia axillaris HOM05D000533 ORTHO05D010350 8.2e-21 103.6 136 49.3
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 9.0e-20 100.1 73 67.1
BolSC29t60551H Brassica oleracea HOM05D000533 ORTHO05D010350 2.0e-19 99.0 61 82.0
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 2.6e-19 98.6 61 83.6
BolSC45t60904H Brassica oleracea HOM05D000533 ORTHO05D010350 5.9e-19 97.4 68 76.5
HanXRQChr17g0560431 Helianthus annuus HOM05D000533 ORTHO05D010350 1.0e-18 96.7 67 76.1
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 5.0e-18 94.4 55 83.6
BolC5t34052H Brassica oleracea HOM05D000533 ORTHO05D010350 4.2e-17 91.3 60 80.0
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 6.7e-15 84.0 61 70.5
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 1.5e-14 82.8 65 66.2
MD12G1214000 Malus domestica HOM05D000533 ORTHO05D010350 2.5e-14 82.0 60 68.3
Hund03919 Selenicereus undatus HOM05D000533 ORTHO05D010350 2.5e-14 82.0 56 73.2
BolSC44t60827H Brassica oleracea HOM05D000533 ORTHO05D010350 3.3e-14 81.6 73 58.9
HanXRQChr00c0690g0576771 Helianthus annuus HOM05D000533 ORTHO05D010350 2.4e-12 75.5 59 71.2
Phvul.001G058350 Phaseolus vulgaris HOM05D000533 ORTHO05D010350 3.4e-11 71.6 51 68.6
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 4.5e-11 71.2 61 63.9
MD12G1021800 Malus domestica HOM05D000533 ORTHO05D010350 1.3e-10 69.7 45 77.8
MCO09G555 Micromonas commoda HOM05D000533 ORTHO05D010350 9.4e-09 63.5 69 46.4
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 2.1e-08 62.4 74 43.2
AagrBONN_evm.TU.Sc2ySwM_368.3374 Anthoceros agrestis HOM05D003936 ORTHO05D004747 6.1e-08 60.8 74 41.9
Mapoly0065s0028 Marchantia polymorpha HOM05D003936 ORTHO05D004747 2.6e-06 55.5 67 38.8


User provided reference genes

Program Settings