Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032534 Daucus carota HOM05D008285 ORTHO05D010431 7.8e-22 106.3 56 100.0
Hma1.2p1_0859F.1_g229500 Hydrangea macrophylla HOM05D008285 ORTHO05D010431 3.4e-17 90.9 50 94.0
CSS0043912 Camellia sinensis var. sinensis HOM05D008285 ORTHO05D010431 1.7e-16 88.6 50 92.0
Nn031s41612 Nelumbo nucifera HOM05D008285 ORTHO05D010431 2.9e-16 87.8 55 83.6
Nn064s42214 Nelumbo nucifera HOM05D008285 ORTHO05D010431 2.9e-16 87.8 55 83.6
PGR111G0120 Punica granatum HOM05D008285 ORTHO05D010431 6.4e-16 86.7 55 83.6
Gohir.1Z049481 Gossypium hirsutum HOM05D008285 ORTHO05D010431 8.3e-16 86.3 50 88.0
Gohir.1Z049931 Gossypium hirsutum HOM05D008285 ORTHO05D010431 8.3e-16 86.3 50 88.0
Gohir.A02G134106 Gossypium hirsutum HOM05D008285 ORTHO05D010431 8.3e-16 86.3 50 88.0
Gorai.009G442800 Gossypium raimondii HOM05D008285 ORTHO05D010431 8.3e-16 86.3 50 88.0
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 8.3e-16 86.3 53 83.0
ATCG01020 Arabidopsis thaliana HOM05D008285 ORTHO05D010431 1.4e-15 85.5 52 84.6
C09p40390 Brassica napus HOM05D008285 ORTHO05D010431 1.4e-15 85.5 52 84.6
BolSC29t60502H Brassica oleracea HOM05D008285 ORTHO05D010431 1.4e-15 85.5 52 84.6
BolSC35t60700H Brassica oleracea HOM05D008285 ORTHO05D010431 1.4e-15 85.5 52 84.6
BolSC44t60819H Brassica oleracea HOM05D008285 ORTHO05D010431 1.4e-15 85.5 52 84.6
BraSC103t45425Z Brassica rapa HOM05D008285 ORTHO05D010431 1.4e-15 85.5 52 84.6
BraSC138t45538Z Brassica rapa HOM05D008285 ORTHO05D010431 1.4e-15 85.5 52 84.6
BraSC25t45906Z Brassica rapa HOM05D008285 ORTHO05D010431 1.4e-15 85.5 52 84.6
BraSC59t46547Z Brassica rapa HOM05D008285 ORTHO05D010431 1.4e-15 85.5 52 84.6
HanXRQCPg0580381 Helianthus annuus HOM05D008285 ORTHO05D010431 1.4e-15 85.5 56 89.3
SalBow1G4672 Salvia bowleyana HOM05D008285 ORTHO05D010431 1.9e-15 85.1 50 88.0
SalBow1G6462 Salvia bowleyana HOM05D008285 ORTHO05D010431 1.9e-15 85.1 50 88.0
Gohir.A01G140110 Gossypium hirsutum HOM05D008285 ORTHO05D010431 3.2e-15 84.3 50 86.0
Manes.18G138300 Manihot esculenta HOM05D008285 ORTHO05D010431 5.4e-15 83.6 53 83.0
Nn212s45209 Nelumbo nucifera HOM05D008285 ORTHO05D010431 7.0e-15 83.2 56 82.1
PGSC0003DMG400000878 Solanum tuberosum HOM05D008285 ORTHO05D010431 7.0e-15 83.2 52 84.6
BolC9t56809H Brassica oleracea HOM05D008285 ORTHO05D010431 9.2e-15 82.8 52 82.7
C02p28770 Brassica napus HOM05D008285 ORTHO05D010431 1.2e-14 82.4 52 80.8
BolC2t08924H Brassica oleracea HOM05D008285 ORTHO05D010431 1.2e-14 82.4 52 80.8
CARHR282410 Cardamine hirsuta HOM05D008285 ORTHO05D010431 1.2e-14 82.4 52 84.6
Gohir.A12G229600 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.2e-14 82.4 50 84.0
Nn8g41105 Nelumbo nucifera HOM05D008285 ORTHO05D010431 2.7e-14 81.3 55 78.2
PSO548G0110 Papaver somniferum HOM05D008285 ORTHO05D010431 7.8e-14 79.7 50 86.0
BolC9t56929H Brassica oleracea HOM05D008285 ORTHO05D010431 1.0e-13 79.3 52 78.8
RcHm_v2.0_CPg0502841 Rosa chinensis HOM05D008285 ORTHO05D010431 1.7e-13 78.6 47 87.2
PSO063G2603 Papaver somniferum HOM05D008285 ORTHO05D010431 5.0e-13 77.0 52 78.8
Nn1g08636 Nelumbo nucifera HOM05D008285 ORTHO05D010431 8.6e-13 76.3 55 74.5
RcHm_v2.0_Chr4g0421191 Rosa chinensis HOM05D008285 ORTHO05D010431 8.6e-13 76.3 47 85.1
SGA_v2.0_scaffold36G14477 Striga asiatica HOM05D008285 ORTHO05D010431 8.6e-13 76.3 58 74.1
BolC2t10592H Brassica oleracea HOM05D008285 ORTHO05D010431 1.1e-12 75.9 48 81.2
PSO339G5238 Papaver somniferum HOM05D008285 ORTHO05D010431 1.1e-12 75.9 52 76.9
Solyc03g013610.1 Solanum lycopersicum HOM05D008285 ORTHO05D010431 1.6e-11 72.0 52 76.9
BolSC45t60913H Brassica oleracea HOM05D008285 ORTHO05D010431 2.1e-11 71.6 55 76.4
CAN.G657.10 Capsicum annuum HOM05D008285 ORTHO05D010431 3.6e-11 70.9 47 78.7
Lalb_Chr07g0191721 Lupinus albus HOM05D008285 ORTHO05D010431 3.6e-11 70.9 49 75.5
CAN.G1045.12 Capsicum annuum HOM05D008285 ORTHO05D010431 4.7e-11 70.5 55 72.7
CAN.G1045.15 Capsicum annuum HOM05D008285 ORTHO05D010431 4.7e-11 70.5 55 72.7
CAN.G222.14 Capsicum annuum HOM05D008285 ORTHO05D010431 4.7e-11 70.5 55 72.7
CAN.G413.8 Capsicum annuum HOM05D008285 ORTHO05D010431 4.7e-11 70.5 55 72.7
CAN.G1431.2 Capsicum annuum HOM05D008285 ORTHO05D010431 1.4e-10 68.9 55 70.9
Aqoxy1G03262 Aquilegia oxysepala HOM05D008285 ORTHO05D010431 1.8e-10 68.6 51 72.5
CAN.G965.8 Capsicum annuum HOM05D008285 ORTHO05D010431 2.3e-10 68.2 55 70.9
Nitab4.5_0015353g0010 Nicotiana tabacum HOM05D008285 ORTHO05D010431 3.1e-10 67.8 45 82.2
Potri.009G163200 Populus trichocarpa HOM05D008285 ORTHO05D010431 3.1e-10 67.8 53 69.8
CAN.G1324.6 Capsicum annuum HOM05D008285 ORTHO05D010431 5.2e-10 67.0 55 70.9
CAN.G8.24 Capsicum annuum HOM05D008285 ORTHO05D010431 6.8e-10 66.6 55 69.1
CAN.G262.5 Capsicum annuum HOM05D008285 ORTHO05D010431 2.0e-09 65.1 53 71.7
Medtr4g006140 Medicago truncatula HOM05D008285 ORTHO05D010431 2.0e-09 65.1 51 70.6
CAN.G213.15 Capsicum annuum HOM05D008285 ORTHO05D010431 2.6e-09 64.7 47 72.3
Psat5g142800 Pisum sativum HOM05D008285 ORTHO05D010431 7.5e-09 63.2 46 71.7


User provided reference genes

Program Settings