Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032504 Daucus carota HOM05D008505 ORTHO05D010735 9.8e-17 89.0 43 100.0
Gorai.009G128900 Gossypium raimondii HOM05D008505 ORTHO05D010735 1.7e-16 88.2 42 97.6
CAN.G2018.8 Capsicum annuum HOM05D008505 ORTHO05D010735 2.9e-16 87.4 42 97.6
CAN.G3365.2 Capsicum annuum HOM05D008505 ORTHO05D010735 2.9e-16 87.4 42 97.6
CAN.G35999.1 Capsicum annuum HOM05D008505 ORTHO05D010735 2.9e-16 87.4 42 97.6
CAN.G89.2 Capsicum annuum HOM05D008505 ORTHO05D010735 2.9e-16 87.4 42 97.6
Migut.D01431 Erythranthe guttata HOM05D008505 ORTHO05D010735 2.9e-16 87.4 42 97.6
Solyc01g067760.1 Solanum lycopersicum HOM05D008505 ORTHO05D010735 2.9e-16 87.4 42 97.6
Solyc09g064400.2 Solanum lycopersicum HOM05D008505 ORTHO05D010735 2.9e-16 87.4 42 97.6
ATCG00630 Arabidopsis thaliana HOM05D008505 ORTHO05D010735 6.4e-16 86.3 42 97.6
CARHR282140 Cardamine hirsuta HOM05D008505 ORTHO05D010735 6.4e-16 86.3 42 97.6
Gohir.A12G229532 Gossypium hirsutum HOM05D008505 ORTHO05D010735 8.3e-16 85.9 43 97.7
CAN.G452.6 Capsicum annuum HOM05D008505 ORTHO05D010735 1.4e-15 85.1 42 95.2
PGR111G0077 Punica granatum HOM05D008505 ORTHO05D010735 1.4e-15 85.1 42 95.2
arahy.Tifrunner.gnm1.ann1.DJ5Q02 Arachis hypogaea HOM05D008505 ORTHO05D010735 2.4e-15 84.3 43 93.0
CAN.G1595.9 Capsicum annuum HOM05D008505 ORTHO05D010735 3.2e-15 84.0 42 92.9
Glyma.12G232400 Glycine max HOM05D008505 ORTHO05D010735 3.2e-15 84.0 42 92.9
Glyma.15G126100 Glycine max HOM05D008505 ORTHO05D010735 3.2e-15 84.0 42 92.9
Gorai.005G108800 Gossypium raimondii HOM05D008505 ORTHO05D010735 3.2e-15 84.0 42 92.9
Phvul.002G090522 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 3.2e-15 84.0 42 92.9
Phvul.009G188366 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 3.2e-15 84.0 42 92.9
PSO548G0021 Papaver somniferum HOM05D008505 ORTHO05D010735 4.1e-15 83.6 42 92.9
A06p23140 Brassica napus HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
C02p43560 Brassica napus HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
C06p22980 Brassica napus HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
BolC9t53162H Brassica oleracea HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
BolSC29t60474H Brassica oleracea HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
BolSC29t60595H Brassica oleracea HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
BolSC35t60655H Brassica oleracea HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
BolSC47t61089H Brassica oleracea HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
BraA06t25417Z Brassica rapa HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
BraSC138t45568Z Brassica rapa HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
BraSC25t45858Z Brassica rapa HOM05D008505 ORTHO05D010735 5.4e-15 83.2 43 95.3
BraSC58t46429Z Brassica rapa HOM05D008505 ORTHO05D010735 7.1e-15 82.8 42 95.2
Gohir.D12G108100 Gossypium hirsutum HOM05D008505 ORTHO05D010735 7.1e-15 82.8 43 95.3
Nitab4.5_0011882g0050 Nicotiana tabacum HOM05D008505 ORTHO05D010735 9.2e-15 82.4 42 90.5
C04p42980 Brassica napus HOM05D008505 ORTHO05D010735 1.2e-14 82.0 42 92.9
BolC4t25868H Brassica oleracea HOM05D008505 ORTHO05D010735 1.2e-14 82.0 42 92.9
CAN.G1739.9 Capsicum annuum HOM05D008505 ORTHO05D010735 1.2e-14 82.0 42 90.5
BolC2t08913H Brassica oleracea HOM05D008505 ORTHO05D010735 4.6e-14 80.1 42 92.9
LjContig00318g0023250 Lotus japonicus HOM05D008505 ORTHO05D010735 7.8e-14 79.3 42 88.1
BraSC103t45457Z Brassica rapa HOM05D008505 ORTHO05D010735 6.6e-13 76.3 41 90.2
BraSC103t45474Z Brassica rapa HOM05D008505 ORTHO05D010735 6.6e-13 76.3 42 90.5
Gorai.007G307300 Gossypium raimondii HOM05D008505 ORTHO05D010735 8.6e-13 75.9 43 88.4
Potri.003G067501 Populus trichocarpa HOM05D008505 ORTHO05D010735 1.5e-12 75.1 42 83.3
Gohir.D06G113625 Gossypium hirsutum HOM05D008505 ORTHO05D010735 3.3e-12 73.9 41 87.8
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 5.6e-12 73.2 38 89.5
CiPaw.11G114400 Carya illinoinensis HOM05D008505 ORTHO05D010735 7.3e-12 72.8 43 83.7
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 1.2e-09 65.5 35 88.6
BolSC35t60742H Brassica oleracea HOM05D008505 ORTHO05D010735 1.7e-08 61.6 31 93.5
Hund19833 Selenicereus undatus HOM05D008505 ORTHO05D010735 1.1e-07 58.9 37 78.4
Nn3g18711 Nelumbo nucifera HOM05D008505 ORTHO05D010735 2.4e-07 57.8 28 96.4
ClCG00G001570 Citrullus lanatus HOM05D000540 ORTHO05D008899 5.4e-07 56.6 35 71.4


User provided reference genes

Program Settings