Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032487 Daucus carota HOM05D001033 ORTHO05D004888 1.5e-94 349.4 159 100.0
Hma1.2p1_2223F.1_g317410 Hydrangea macrophylla HOM05D001033 ORTHO05D004888 6.9e-92 340.5 159 95.6
Nn021s41548 Nelumbo nucifera HOM05D001033 ORTHO05D004888 1.2e-91 339.7 159 94.3
Migut.D01427 Erythranthe guttata HOM05D001033 ORTHO05D004888 1.5e-91 339.3 159 95.6
RcHm_v2.0_CPg0502181 Rosa chinensis HOM05D001033 ORTHO05D004888 7.7e-91 337.0 159 94.3
Gohir.1Z049399 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.0e-90 336.7 159 94.3
Gohir.A09G102100 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.0e-90 336.7 159 94.3
COL.COLO4_03102 Corchorus olitorius HOM05D001033 ORTHO05D004888 1.3e-90 336.3 159 93.7
PSO548G0080 Papaver somniferum HOM05D001033 ORTHO05D004888 1.3e-90 336.3 159 93.7
Peaxi162Scf00334g00124 Petunia axillaris HOM05D001033 ORTHO05D004888 1.3e-90 336.3 159 95.6
SalBow1G1376 Salvia bowleyana HOM05D001033 ORTHO05D004888 1.7e-90 335.9 159 94.3
HanXRQChr00c0345g0573891 Helianthus annuus HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.0
HanXRQChr00c0702g0576871 Helianthus annuus HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.0
HanXRQChr02g0044951 Helianthus annuus HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.0
HanXRQChr07g0201011 Helianthus annuus HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.0
HanXRQChr08g0210301 Helianthus annuus HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.0
HanXRQChr10g0283491 Helianthus annuus HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.0
HanXRQChr10g0289211 Helianthus annuus HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.0
HanXRQChr10g0303781 Helianthus annuus HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.0
HanXRQChr11g0326761 Helianthus annuus HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.0
HanXRQCPg0579971 Helianthus annuus HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.0
CAN.G219.25 Capsicum annuum HOM05D001033 ORTHO05D004888 3.8e-90 334.7 159 95.0
PGR111G0105 Punica granatum HOM05D001033 ORTHO05D004888 5.0e-90 334.3 159 93.7
unitig_91.g26504 Utricularia gibba HOM05D001033 ORTHO05D004888 5.0e-90 334.3 159 93.7
Medtr4g035040 Medicago truncatula HOM05D001033 ORTHO05D004888 1.1e-89 333.2 159 92.5
Medtr7g021800 Medicago truncatula HOM05D001033 ORTHO05D004888 1.1e-89 333.2 159 92.5
Ah.10g027550 Amaranthus hybridus HOM05D001033 ORTHO05D004888 1.4e-89 332.8 159 93.7
Gohir.D03G073392 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.4e-89 332.8 159 93.1
Potri.013G163200 Populus trichocarpa HOM05D001033 ORTHO05D004888 1.4e-89 332.8 160 93.1
HanXRQChr10g0285321 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-89 332.4 159 94.3
HanXRQChr02g0041501 Helianthus annuus HOM05D001033 ORTHO05D004888 2.5e-89 332.0 159 94.3
EL10As12g24022 Beta vulgaris HOM05D001033 ORTHO05D004888 4.2e-89 331.3 159 93.7
EL10As1g23049 Beta vulgaris HOM05D001033 ORTHO05D004888 4.2e-89 331.3 159 93.7
Lsat_1_v5_gn_3_99221 Lactuca sativa HOM05D001033 ORTHO05D004888 4.2e-89 331.3 157 94.3
Lsat_1_v5_gn_3_99300 Lactuca sativa HOM05D001033 ORTHO05D004888 4.2e-89 331.3 157 94.3
Lsat_1_v5_gn_4_40440 Lactuca sativa HOM05D001033 ORTHO05D004888 4.2e-89 331.3 157 94.3
Solyc00g500061.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 7.2e-89 330.5 159 93.7
QL93p0270_0002 Quercus lobata HOM05D001033 ORTHO05D004888 1.2e-88 329.7 158 92.4
LjContig00318g0025596 Lotus japonicus HOM05D001033 ORTHO05D004888 2.7e-88 328.6 159 91.2
Lalb_Chr07g0192281 Lupinus albus HOM05D001033 ORTHO05D004888 6.1e-88 327.4 159 92.5
Lalb_Chr20g0115661 Lupinus albus HOM05D001033 ORTHO05D004888 1.4e-87 326.2 159 91.8
VMungo0498G0002 Vigna mungo HOM05D001033 ORTHO05D004888 3.9e-87 324.7 159 89.3
Lj4g0025955 Lotus japonicus HOM05D001033 ORTHO05D004888 1.1e-86 323.2 159 90.6
Phvul.011G056548 Phaseolus vulgaris HOM05D001033 ORTHO05D004888 2.0e-86 322.4 159 88.7
CAN.G1183.6 Capsicum annuum HOM05D001033 ORTHO05D004888 5.7e-86 320.9 159 90.6
CAN.G170.11 Capsicum annuum HOM05D001033 ORTHO05D004888 1.7e-85 319.3 159 89.9
ATCG00420 Arabidopsis thaliana HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
BNapus_Darmor_BZH_scaffold_253p00160 Brassica napus HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
BNapus_Darmor_BZH_scaffold_287p00080 Brassica napus HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
C02p43470 Brassica napus HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
C09p40480 Brassica napus HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
BolSC45t60947H Brassica oleracea HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
BolSC46t61041H Brassica oleracea HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
BolSC47t61103H Brassica oleracea HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
BraSC25t45841Z Brassica rapa HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
BraSC25t45874Z Brassica rapa HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
BraSC58t46413Z Brassica rapa HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
BraSC58t46484Z Brassica rapa HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
TWI36G0295 Tripterygium wilfordii HOM05D001033 ORTHO05D004888 3.7e-85 318.2 159 89.3
Eucgr.A02747 Eucalyptus grandis HOM05D001033 ORTHO05D004888 6.3e-85 317.4 158 88.6
CSS0012650 Camellia sinensis var. sinensis HOM05D001033 ORTHO05D004888 1.8e-84 315.8 159 91.2
HanXRQChr15g0480701 Helianthus annuus HOM05D001033 ORTHO05D004888 1.8e-84 315.8 151 94.0
AL2G21460 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 4.1e-84 314.7 159 88.1
BolSC45t60865H Brassica oleracea HOM05D001033 ORTHO05D004888 4.1e-84 314.7 159 88.7
Sc19g0006000 Simmondsia chinensis HOM05D001033 ORTHO05D004888 5.3e-84 314.3 157 89.8
BolSC29t60582H Brassica oleracea HOM05D001033 ORTHO05D004888 1.2e-83 313.2 159 88.1
CARHR282040 Cardamine hirsuta HOM05D001033 ORTHO05D004888 8.5e-82 307.0 154 89.0
A06p23250 Brassica napus HOM05D001033 ORTHO05D004888 1.1e-81 306.6 159 86.2
Medtr0002s0630 Medicago truncatula HOM05D001033 ORTHO05D004888 1.1e-81 306.6 158 85.4
Ah.09g227310 Amaranthus hybridus HOM05D001033 ORTHO05D004888 1.0e-79 300.1 142 94.4
Gorai.001G177200 Gossypium raimondii HOM05D001033 ORTHO05D004888 1.1e-78 296.6 143 93.0
Sed0011576 Sechium edule HOM05D001033 ORTHO05D004888 1.1e-78 296.6 144 91.0
Sed0015951 Sechium edule HOM05D000680 ORTHO05D000738 1.1e-78 296.6 144 91.0
Sed0016230 Sechium edule HOM05D001033 ORTHO05D004888 1.1e-78 296.6 144 91.0
CAN.G91.9 Capsicum annuum HOM05D001033 ORTHO05D004888 2.0e-78 295.8 159 84.3
Sed0001763 Sechium edule HOM05D001033 ORTHO05D004888 5.7e-78 294.3 144 89.6
ATR0303G003 Amborella trichopoda HOM05D001033 ORTHO05D004888 1.6e-75 286.2 139 91.4
SEGI_35798 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 1.6e-75 286.2 159 81.1
Gohir.D01G102242 Gossypium hirsutum HOM05D001033 ORTHO05D004888 2.0e-75 285.8 159 83.6
AL2G20710 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 5.9e-75 284.3 159 82.4
Gohir.D07G155032 Gossypium hirsutum HOM05D001033 ORTHO05D004888 5.5e-73 277.7 139 89.2
BraA06t25427Z Brassica rapa HOM05D001033 ORTHO05D004888 4.7e-72 274.6 149 83.2
Solyc00g500142.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 2.6e-70 268.9 134 91.0
Sed0007524 Sechium edule HOM05D000680 ORTHO05D000738 4.8e-69 264.6 144 84.0
Thhalv10010993m.g Eutrema salsugineum HOM05D001033 ORTHO05D004888 3.1e-68 261.9 159 76.7
Nn071s42392 Nelumbo nucifera HOM05D001033 ORTHO05D004888 4.1e-68 261.5 151 81.5
Gohir.D07G099350 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.6e-67 259.6 134 87.3
BolSC46t60994H Brassica oleracea HOM05D001033 ORTHO05D004888 2.0e-67 259.2 159 76.1
BolC9t55818H Brassica oleracea HOM05D001033 ORTHO05D004888 2.5e-65 252.3 163 72.4
FAN19G1182 Fragaria x ananassa HOM05D001033 ORTHO05D004888 2.1e-64 249.2 159 76.1
Nitab4.5_0001841g0030 Nicotiana tabacum HOM05D001033 ORTHO05D004888 1.2e-62 243.4 132 83.3
EL10As5g23626 Beta vulgaris HOM05D001033 ORTHO05D004888 4.4e-62 241.5 117 93.2
Gorai.005G187900 Gossypium raimondii HOM05D001033 ORTHO05D004888 4.1e-60 235.0 139 77.0
Lalb_Chr07g0192231 Lupinus albus HOM05D001033 ORTHO05D004888 3.5e-59 231.9 135 79.3
EL10Ac9g20715 Beta vulgaris HOM05D001033 ORTHO05D004888 3.8e-58 228.4 136 79.4
Nitab4.5_0001761g0190 Nicotiana tabacum HOM05D001033 ORTHO05D004888 4.7e-56 221.5 112 89.3
Gorai.001G107100 Gossypium raimondii HOM05D001033 ORTHO05D004888 6.1e-56 221.1 134 78.4
EL10As15g24143 Beta vulgaris HOM05D001033 ORTHO05D004888 1.0e-55 220.3 158 69.6
Lj2C1237T30 Lonicera japonica HOM05D001033 ORTHO05D004888 2.0e-54 216.1 100 95.0
Lj2C1239T58 Lonicera japonica HOM05D001033 ORTHO05D004888 2.0e-54 216.1 100 95.0
Lj2C1239T8 Lonicera japonica HOM05D001033 ORTHO05D004888 2.0e-54 216.1 100 95.0
Duzib192G0593 Durio zibethinus HOM05D001033 ORTHO05D004888 5.7e-54 214.5 109 89.0
vmacro22414 Vaccinium macrocarpon HOM05D001033 ORTHO05D004888 2.2e-53 212.6 105 92.4
C02p28640 Brassica napus HOM05D001033 ORTHO05D004888 8.3e-53 210.7 107 86.9
BolC2t08910H Brassica oleracea HOM05D001033 ORTHO05D004888 8.3e-53 210.7 107 86.9
SMO086G0027 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 1.8e-52 209.5 159 62.9
SMO086G0049 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 1.8e-52 209.5 159 62.9
SMO233G0001 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 1.8e-52 209.5 159 62.9
Gohir.A09G102850 Gossypium hirsutum HOM05D001033 ORTHO05D004888 4.1e-52 208.4 101 91.1
MBI06_g39081_MAGBIO Magnolia biondii HOM05D001033 ORTHO05D004888 4.1e-52 208.4 102 88.2
SGA_v2.0_scaffold781G53594 Striga asiatica HOM05D001033 ORTHO05D004888 3.5e-51 205.3 162 66.7
Lsat_1_v5_gn_2_5601 Lactuca sativa HOM05D001033 ORTHO05D004888 5.9e-51 204.5 101 91.1
Migut.D01354 Erythranthe guttata HOM05D001033 ORTHO05D004888 7.8e-51 204.1 97 94.8
Prupe.1G270900 Prunus persica HOM05D001033 ORTHO05D004888 1.3e-50 203.4 95 94.7
PSO302G0237 Papaver somniferum HOM05D001033 ORTHO05D004888 3.9e-50 201.8 100 89.0
BolC7t41665H Brassica oleracea HOM05D001033 ORTHO05D004888 1.0e-47 193.7 101 87.1
Gorai.009G225200 Gossypium raimondii HOM05D001033 ORTHO05D004888 1.0e-47 193.7 109 83.5
Nitab4.5_0005412g0030 Nicotiana tabacum HOM05D001033 ORTHO05D004888 4.0e-47 191.8 111 78.4
Nn1g03019 Nelumbo nucifera HOM05D001033 ORTHO05D004888 8.9e-47 190.7 150 69.3
SEGI_19633 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 2.6e-46 189.1 108 79.6
arahy.Tifrunner.gnm1.ann1.XVSZ20 Arachis hypogaea HOM05D001033 ORTHO05D004888 4.4e-46 188.3 89 93.3
Gohir.D05G218250 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.7e-45 186.4 109 78.9
PGSC0003DMG400002651 Solanum tuberosum HOM05D001033 ORTHO05D004888 4.9e-45 184.9 92 92.4
Peaxi162Scf00110g00002 Petunia axillaris HOM05D001033 ORTHO05D004888 1.3e-42 176.8 83 97.6
DCAR_022590 Daucus carota HOM05D013260 ORTHO05D004888 1.7e-42 176.4 84 96.4
arahy.Tifrunner.gnm1.ann1.GNV4IL Arachis hypogaea HOM05D001033 ORTHO05D004888 3.0e-42 175.6 90 84.4
BolSC29t60459H Brassica oleracea HOM05D001033 ORTHO05D004888 3.0e-42 175.6 89 88.8
CAN.G386.17 Capsicum annuum HOM05D000388 ORTHO05D004888 3.9e-42 175.3 83 96.4
Oeu062837.1 Olea europaea HOM05D001033 ORTHO05D004888 3.9e-42 175.3 100 81.0
arahy.Tifrunner.gnm1.ann1.WN69VX Arachis hypogaea HOM05D001033 ORTHO05D004888 1.1e-41 173.7 83 94.0
Haze_27536 Corylus avellana HOM05D001033 ORTHO05D004888 7.3e-41 171.0 83 91.6
unitig_87.g27944 Utricularia gibba HOM05D000388 ORTHO05D004888 1.2e-40 170.2 86 88.4
MELO3C029536.2 Cucumis melo HOM05D001033 ORTHO05D004888 8.1e-40 167.5 83 89.2
EL10Ac4g08633 Beta vulgaris HOM05D001033 ORTHO05D004888 9.8e-38 160.6 82 90.2
PGSC0003DMG400019224 Solanum tuberosum HOM05D001033 ORTHO05D004888 1.1e-36 157.1 92 78.3
CAN.G100.48 Capsicum annuum HOM05D001033 ORTHO05D004888 9.2e-36 154.1 78 87.2
SEGI_08348 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 1.0e-34 150.6 100 72.0
SEGI_38193 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 1.7e-34 149.8 84 82.1
RcHm_v2.0_Chr7g0209391 Rosa chinensis HOM05D001033 ORTHO05D004888 2.3e-34 149.4 72 93.1
Nitab4.5_0011099g0060 Nicotiana tabacum HOM05D001033 ORTHO05D004888 3.0e-34 149.1 78 87.2
SEGI_20198 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 1.5e-33 146.7 83 80.7
Lalb_Chr03g0039371 Lupinus albus HOM05D001033 ORTHO05D004888 7.3e-33 144.4 68 97.1
HanXRQChr09g0274591 Helianthus annuus HOM05D001033 ORTHO05D004888 2.6e-30 136.0 65 93.8
Sed0002731 Sechium edule HOM05D001033 ORTHO05D004888 5.8e-30 134.8 124 57.3
Gohir.A10G200850 Gossypium hirsutum HOM05D001033 ORTHO05D004888 5.4e-28 128.3 59 93.2
Nn055s41942 Nelumbo nucifera HOM05D001033 ORTHO05D004888 2.7e-27 125.9 57 96.5
HanXRQChr17g0559251 Helianthus annuus HOM05D001033 ORTHO05D004888 8.6e-26 120.9 59 91.5
TAR633G0438 Trochodendron aralioides HOM05D001033 ORTHO05D004888 2.8e-24 115.9 58 84.5
ClCG07G012530 Citrullus lanatus HOM05D001033 ORTHO05D004888 6.2e-24 114.8 55 89.1
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.8e-22 108.2 69 68.1
Lalb_Chr03g0030861 Lupinus albus HOM05D001033 ORTHO05D004888 1.3e-21 107.1 52 90.4
BolSC35t60639H Brassica oleracea HOM05D001033 ORTHO05D004888 2.2e-21 106.3 53 86.8
Solyc01g056470.1 Solanum lycopersicum HOM05D000890 ORTHO05D004888 3.8e-21 105.5 99 52.5
TPR.G37622 Trifolium pratense HOM05D001033 ORTHO05D004888 8.4e-21 104.4 50 92.0
Lalb_Chr23g0274161 Lupinus albus HOM05D001033 ORTHO05D004888 1.2e-19 100.5 53 81.1
C09p29570 Brassica napus HOM05D001033 ORTHO05D004888 6.6e-18 94.7 43 93.0
Phvul.005G068600 Phaseolus vulgaris HOM05D001033 ORTHO05D004888 6.6e-18 94.7 86 51.2
ClCG00G002680 Citrullus lanatus HOM05D001033 ORTHO05D004888 8.1e-16 87.8 41 90.2
EL10Ac5g11368 Beta vulgaris HOM05D001033 ORTHO05D004888 4.0e-15 85.5 48 81.2
TAR338G0003 Trochodendron aralioides HOM05D001033 ORTHO05D004888 1.3e-13 80.5 39 92.3
MELO3C034226.2 Cucumis melo HOM05D001033 ORTHO05D004888 2.7e-11 72.8 35 88.6
AUR62014217 Chenopodium quinoa HOM05D001033 ORTHO05D002045 5.1e-10 68.6 32 93.8
Lalb_Chr03g0030871 Lupinus albus HOM05D001033 ORTHO05D004888 8.7e-10 67.8 68 51.5
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 4.8e-08 62.0 88 33.0
Hund10567 Selenicereus undatus HOM05D001033 ORTHO05D004888 2.4e-07 59.7 38 63.2
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 9.0e-07 57.8 95 34.7
BolSC47t61120H Brassica oleracea HOM05D001033 ORTHO05D004888 4.5e-06 55.5 24 95.8
FvH4_3g38401 Fragaria vesca HOM05D001033 ORTHO05D004888 7.6e-06 54.7 27 88.9
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 9.9e-06 54.3 84 36.9


User provided reference genes

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