Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032461 Daucus carota HOM05D004909 ORTHO05D009625 0.0e+00 1908.3 960 100.0
PGR044G1103 Punica granatum HOM05D004909 ORTHO05D009625 2.1e-151 540.8 923 37.5
PGR004G1782 Punica granatum HOM05D004909 ORTHO05D009625 6.0e-138 496.1 801 38.2
EL10Ac7g16727 Beta vulgaris HOM05D004909 ORTHO05D009625 2.4e-131 474.2 959 35.6
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 4.6e-130 469.9 934 36.4
RcHm_v2.0_Chr6g0256711 Rosa chinensis HOM05D004909 ORTHO05D009625 1.9e-128 464.5 873 36.2
VMungo1067G0003 Vigna mungo HOM05D004909 ORTHO05D009625 2.1e-122 444.5 1024 33.9
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 2.7e-106 391.0 486 46.5
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 3.5e-90 337.4 498 39.4
Aqoxy2G02242 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 3.9e-81 307.4 474 38.8
EL10Ac1g02203 Beta vulgaris HOM05D004909 ORTHO05D009625 1.7e-79 302.0 595 36.6
Aqoxy3G01129 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.1e-78 299.3 608 33.1
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 5.9e-77 293.5 543 36.8
Cc00_g11440 Coffea canephora HOM05D004909 ORTHO05D009625 3.0e-73 281.2 331 49.5
AUR62044036 Chenopodium quinoa HOM05D004909 ORTHO05D009625 1.0e-68 266.2 451 39.0
Sc14g0003260 Simmondsia chinensis HOM05D004909 ORTHO05D009625 2.7e-66 258.1 328 44.8
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.9e-65 254.2 550 34.7
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 9.7e-64 249.6 346 43.4
Sc11g0004480 Simmondsia chinensis HOM05D004909 ORTHO05D009625 1.5e-59 235.7 292 47.9
RcHm_v2.0_MTg0498751 Rosa chinensis HOM05D004909 ORTHO05D009625 2.0e-53 215.3 498 30.3
AUR62010529 Chenopodium quinoa HOM05D004909 ORTHO05D005619 1.2e-48 199.5 508 31.3
PSO063G2824 Papaver somniferum HOM05D004909 ORTHO05D009625 5.7e-48 197.2 414 35.5
CAN.G1001.42 Capsicum annuum HOM05D004909 ORTHO05D009625 1.6e-42 179.1 260 39.6
Hma1.2p1_0295F.1_g116730 Hydrangea macrophylla HOM05D004909 ORTHO05D009625 4.4e-40 171.0 228 44.7
SHI38062 Sapria himalayana HOM05D004909 ORTHO05D009625 2.2e-39 168.7 447 30.9
CsaV3_UNG207890 Cucumis sativus L. HOM05D004909 ORTHO05D009625 1.9e-35 155.6 502 29.7
Duzib116G0563 Durio zibethinus HOM05D004909 ORTHO05D009625 5.6e-35 154.1 391 27.9
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 4.7e-34 151.0 301 33.9
Aqoxy2G02243 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 7.5e-32 143.7 235 40.9
Aqoxy3G01128 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 7.5e-32 143.7 235 40.9
EL10As7g23793 Beta vulgaris HOM05D004909 ORTHO05D009928 1.3e-31 142.9 210 39.5
EL10Ac1g02202 Beta vulgaris HOM05D004909 ORTHO05D009625 2.9e-31 141.7 193 41.5
Nitab4.5_0000014g0460 Nicotiana tabacum HOM05D004909 ORTHO05D009625 2.9e-31 141.7 239 35.1
EL10Ac1g01430 Beta vulgaris HOM05D004909 ORTHO05D009625 1.2e-29 136.3 260 35.8
CAN.G490.20 Capsicum annuum HOM05D004909 ORTHO05D009625 1.6e-29 136.0 211 40.8
SHI46715 Sapria himalayana HOM05D004909 ORTHO05D009625 1.1e-27 129.8 567 24.7
SHI49457 Sapria himalayana HOM05D004909 ORTHO05D009625 4.4e-24 117.9 205 39.5
SHI49389 Sapria himalayana HOM05D004909 ORTHO05D009625 1.3e-23 116.3 228 37.7
Oeu057349.1 Olea europaea HOM05D013539 ORTHO05D014921 9.2e-22 110.2 162 41.4
EL10Ac1g00651 Beta vulgaris HOM05D004909 ORTHO05D009625 2.1e-21 109.0 169 35.5
SHI35986 Sapria himalayana HOM05D004909 ORTHO05D009625 3.5e-21 108.2 203 38.9
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 1.3e-20 106.3 310 30.0
SHI40430 Sapria himalayana HOM05D004909 ORTHO05D009625 2.3e-20 105.5 200 40.0
Cc00_g01880 Coffea canephora HOM05D004909 ORTHO05D009625 5.6e-19 100.9 175 38.3
SHI41761 Sapria himalayana HOM05D004909 ORTHO05D009625 4.4e-16 91.3 267 30.0
SEGI_03043 Sequoiadendron giganteum HOM05D004909 ORTHO05D019368 7.6e-16 90.5 232 31.5
SGA_v2.0_scaffold119G32792 Striga asiatica HOM05D004909 ORTHO05D009625 1.7e-15 89.4 120 42.5
CAN.G335.18 Capsicum annuum HOM05D004909 ORTHO05D009625 7.1e-14 84.0 135 37.0
SHI35576 Sapria himalayana HOM05D004909 ORTHO05D009625 2.3e-12 79.0 86 52.3
SHI43987 Sapria himalayana HOM05D004909 ORTHO05D009625 2.5e-11 75.5 128 38.3
Nitab4.5_0005140g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009625 2.1e-10 72.4 290 24.1
Hma1.2p1_1313F.1_g274950 Hydrangea macrophylla HOM05D004909 ORTHO05D009625 2.6e-08 65.5 96 40.6
SGA_v2.0_scaffold255G45542 Striga asiatica HOM05D004909 ORTHO05D009625 5.8e-08 64.3 54 53.7
AUR62044037 Chenopodium quinoa HOM05D004909 ORTHO05D009625 3.8e-07 61.6 202 28.7
SHI41760 Sapria himalayana HOM05D009967 ORTHO05D009625 8.4e-07 60.5 88 40.9
SHI29965 Sapria himalayana HOM05D022355 ORTHO05D009625 1.1e-06 60.1 259 24.3
SHI39947 Sapria himalayana HOM05D004909 ORTHO05D009625 1.9e-06 59.3 73 46.6
Lsat_1_v5_gn_5_24721 Lactuca sativa HOM05D001793 ORTHO05D001938 2.4e-06 58.9 88 40.9
CsaV3_UNG207880 Cucumis sativus L. HOM05D004909 ORTHO05D009625 3.2e-06 58.5 139 29.5
SHI29963 Sapria himalayana HOM05D009967 ORTHO05D009625 9.3e-06 57.0 80 42.5


User provided reference genes

Program Settings