Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032460 Daucus carota HOM05D003517 ORTHO05D009794 2.1e-104 382.5 206 100.0
Lj2P1233T102 Lonicera japonica HOM05D003517 ORTHO05D009794 2.8e-101 372.1 204 98.0
Lj2P1236T75 Lonicera japonica HOM05D003517 ORTHO05D009794 2.8e-101 372.1 204 98.0
ATMG00270 Arabidopsis thaliana HOM05D003517 ORTHO05D009794 4.9e-98 361.3 204 95.6
BNapus_Darmor_BZH_scaffold_234p00290 Brassica napus HOM05D003517 ORTHO05D009794 4.9e-98 361.3 204 95.6
BolSC28t60338H Brassica oleracea HOM05D003517 ORTHO05D009794 4.9e-98 361.3 204 95.6
BolSC28t60397H Brassica oleracea HOM05D003517 ORTHO05D009794 4.9e-98 361.3 204 95.6
BraSC77t46643Z Brassica rapa HOM05D003517 ORTHO05D009794 4.9e-98 361.3 204 95.6
CARHR282730 Cardamine hirsuta HOM05D003517 ORTHO05D009794 4.9e-98 361.3 204 95.6
Peaxi162Scf00456g00029 Petunia axillaris HOM05D003517 ORTHO05D009794 8.4e-98 360.5 203 96.1
Solyc00g021630.1 Solanum lycopersicum HOM05D003517 ORTHO05D009794 8.4e-98 360.5 203 96.1
HanXRQChr00c0234g0572741 Helianthus annuus HOM05D003517 ORTHO05D009794 1.4e-97 359.8 202 96.5
HanXRQMTg0579471 Helianthus annuus HOM05D003517 ORTHO05D009794 1.4e-97 359.8 202 96.5
CANSAT16G0040 Cannabis sativa HOM05D003517 ORTHO05D009794 9.3e-97 357.1 204 94.1
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 1.2e-96 356.7 203 95.1
Sed0011263 Sechium edule HOM05D003517 ORTHO05D009794 2.1e-96 355.9 202 95.0
Sed0015872 Sechium edule HOM05D003517 ORTHO05D009794 2.1e-96 355.9 202 95.0
RcHm_v2.0_MTg0498991 Rosa chinensis HOM05D003517 ORTHO05D009794 6.0e-96 354.4 204 93.6
Lj5g0026865 Lotus japonicus HOM05D003517 ORTHO05D009794 3.0e-95 352.1 206 92.7
LjContig00439g0001390 Lotus japonicus HOM05D003517 ORTHO05D009794 3.0e-95 352.1 206 92.7
LjContig00446g0016600 Lotus japonicus HOM05D003517 ORTHO05D009794 3.0e-95 352.1 206 92.7
Aqoxy38s018 Aquilegia oxysepala HOM05D003517 ORTHO05D009794 1.9e-94 349.4 204 92.6
Nn003s41395 Nelumbo nucifera HOM05D003517 ORTHO05D009794 1.3e-93 346.7 203 92.6
Nn1g09965 Nelumbo nucifera HOM05D003517 ORTHO05D009794 1.3e-93 346.7 203 92.6
Nn1g10124 Nelumbo nucifera HOM05D003517 ORTHO05D009794 1.3e-93 346.7 203 92.6
Sp3g25610 Schrenkiella parvula HOM05D003517 ORTHO05D009794 1.3e-93 346.7 198 94.9
Lalb_Chr00c21g0406031 Lupinus albus HOM05D003517 ORTHO05D009794 2.1e-93 345.9 204 91.7
Lalb_Chr00c39g0409031 Lupinus albus HOM05D003517 ORTHO05D009794 2.1e-93 345.9 204 91.7
Lalb_Chr00c39g0409211 Lupinus albus HOM05D003517 ORTHO05D009794 2.1e-93 345.9 204 91.7
Lalb_Chr00c51g0413121 Lupinus albus HOM05D003517 ORTHO05D009794 2.1e-93 345.9 204 91.7
Glyma.08G301000 Glycine max HOM05D003517 ORTHO05D009794 1.2e-91 340.1 200 92.5
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 7.6e-91 337.4 200 92.0
Gorai.001G168000 Gossypium raimondii HOM05D003517 ORTHO05D009794 7.6e-91 337.4 205 91.2
Gohir.A03G108600 Gossypium hirsutum HOM05D003517 ORTHO05D009794 3.8e-90 335.1 205 90.7
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.4e-89 332.4 203 88.7
Nitab4.5_0000172g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.2e-89 332.0 203 87.7
SHI35306 Sapria himalayana HOM05D003517 ORTHO05D009794 1.6e-88 329.7 206 88.3
SHI49089 Sapria himalayana HOM05D003517 ORTHO05D009794 1.6e-88 329.7 206 88.3
CAN.G1.11 Capsicum annuum HOM05D003517 ORTHO05D009794 2.1e-88 329.3 203 88.2
SHI53309 Sapria himalayana HOM05D003517 ORTHO05D009794 4.6e-88 328.2 206 87.9
CSS0025973 Camellia sinensis var. sinensis HOM05D003517 ORTHO05D009794 7.9e-88 327.4 183 96.2
HanXRQChr02g0049481 Helianthus annuus HOM05D003517 ORTHO05D009794 1.3e-87 326.6 187 94.1
MBI05_g05356_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009794 1.3e-85 320.1 194 89.2
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.3e-85 320.1 203 86.2
HanXRQChr01g0013411 Helianthus annuus HOM05D003517 ORTHO05D009794 1.8e-84 316.2 176 96.6
Gohir.A08G086024 Gossypium hirsutum HOM05D003517 ORTHO05D009794 3.3e-78 295.4 204 80.9
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.3e-78 295.0 203 83.3
LjContig00315g0004708 Lotus japonicus HOM05D003517 ORTHO05D009794 5.9e-75 284.6 198 81.8
SabraMtG0003300 Salix brachista HOM05D003517 ORTHO05D009794 1.7e-74 283.1 157 94.3
arahy.Tifrunner.gnm1.ann1.N584HR Arachis hypogaea HOM05D003517 ORTHO05D009794 7.2e-73 277.7 200 80.0
Nitab4.5_0000172g0410 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.3e-71 273.5 203 78.8
CDE02G3221 Ceratophyllum demersum HOM05D003517 ORTHO05D009794 2.6e-67 259.2 148 91.9
unitig_0.g2040 Utricularia gibba HOM05D003517 ORTHO05D009794 5.0e-66 255.0 155 88.4
HanXRQChr09g0237761 Helianthus annuus HOM05D003517 ORTHO05D009794 1.1e-65 253.8 140 96.4
Nitab4.5_0003945g0090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.5e-65 252.7 176 81.8
CsaV3_UNG208670 Cucumis sativus L. HOM05D003517 ORTHO05D009794 8.5e-58 227.6 130 94.6
RhsimMtG0007100 Rhododendron simsii HOM05D003517 ORTHO05D009794 2.1e-56 223.0 130 93.8
Nitab4.5_0001152g0960 Nicotiana tabacum HOM05D003517 ORTHO05D009794 4.7e-56 221.9 148 81.1
TPR.G40594 Trifolium pratense HOM05D003517 ORTHO05D009794 5.3e-52 208.4 124 91.1
Pp3c12_12240 Physcomitrium patens HOM05D003517 ORTHO05D009794 7.0e-52 208.0 184 64.7
HanXRQChr05g0138851 Helianthus annuus HOM05D003517 ORTHO05D009794 2.9e-50 202.6 117 93.2
Sp5g20260 Schrenkiella parvula HOM05D003517 ORTHO05D009794 8.8e-47 191.0 197 62.9
Lj2P92T86 Lonicera japonica HOM05D003517 ORTHO05D009794 7.0e-44 181.4 100 93.0
BraSC159t45725Z Brassica rapa HOM05D003517 ORTHO05D009794 1.5e-41 173.7 103 93.2
Aa31csc798G10 Aethionema arabicum HOM05D003517 ORTHO05D009794 4.7e-40 168.7 115 81.7
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.4e-36 156.4 184 58.7
Actinidia34878 Actinidia chinensis HOM05D003517 ORTHO05D009794 3.3e-33 146.0 95 90.5
Thhalv10029192m.g Eutrema salsugineum HOM05D003517 ORTHO05D009794 5.5e-33 145.2 82 92.7
Ca_03783_v3 Cicer arietinum L. HOM05D009973 ORTHO05D009794 4.0e-31 139.0 89 89.9
VMungo0985G0003 Vigna mungo HOM05D003517 ORTHO05D009794 5.2e-31 138.7 88 90.9
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 9.2e-28 127.9 174 53.4
TPR.G39738 Trifolium pratense HOM05D003517 ORTHO05D009794 2.0e-27 126.7 71 95.8
CiPaw.05G081600 Carya illinoinensis HOM05D003517 ORTHO05D009794 1.0e-26 124.4 93 73.1
Solyc10g045730.1 Solanum lycopersicum HOM05D003517 ORTHO05D009794 3.0e-23 112.8 131 58.8
Solyc11g030930.3 Solanum lycopersicum HOM05D003517 ORTHO05D009794 1.7e-21 107.1 61 90.2
Nitab4.5_0001152g0550 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.2e-21 106.7 64 79.7
Lsat_1_v5_gn_5_95761 Lactuca sativa HOM05D002069 ORTHO05D009794 1.1e-20 104.4 57 84.2
Aqoxy12s041 Aquilegia oxysepala HOM05D003517 ORTHO05D009794 3.6e-16 89.4 71 80.3
SGA_v2.0_scaffold400G50848 Striga asiatica HOM05D003517 ORTHO05D009794 1.1e-15 87.8 78 64.1
HanXRQChr05g0138841 Helianthus annuus HOM05D003517 ORTHO05D009794 4.0e-15 85.9 57 87.7
Nitab4.5_0001152g0290 Nicotiana tabacum HOM05D003517 ORTHO05D009794 5.8e-14 82.0 63 79.4
SalBow1G3342 Salvia bowleyana HOM05D002965 ORTHO05D010536 6.4e-13 78.6 44 95.5
Psat0s1454g0040 Pisum sativum HOM05D003517 ORTHO05D009794 4.6e-11 72.4 89 59.6
HanXRQChr05g0138831 Helianthus annuus HOM05D003517 ORTHO05D009794 1.5e-09 67.4 37 91.9
HanXRQChr05g0138811 Helianthus annuus HOM05D003517 ORTHO05D009794 1.2e-08 64.3 37 89.2
HanXRQChr05g0138821 Helianthus annuus HOM05D003517 ORTHO05D009794 1.2e-08 64.3 37 89.2


User provided reference genes

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