Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032450 Daucus carota HOM05D007877 ORTHO05D009957 4.5e-135 484.6 241 100.0
Lj2P1225T96 Lonicera japonica HOM05D007877 ORTHO05D009957 2.1e-132 475.7 241 98.3
Solyc00g500168.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 5.7e-130 467.6 241 97.1
Solyc00g500346.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 5.7e-130 467.6 241 97.1
Solyc00g500357.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 5.7e-130 467.6 241 97.1
CANSAT16G0008 Cannabis sativa HOM05D007877 ORTHO05D009957 5.9e-127 457.6 241 95.4
HanXRQChr00c0055g0571431 Helianthus annuus HOM05D007877 ORTHO05D009957 7.7e-127 457.2 241 95.4
HanXRQMTg0579501 Helianthus annuus HOM05D007877 ORTHO05D009957 7.7e-127 457.2 241 95.4
RcHm_v2.0_MTg0499111 Rosa chinensis HOM05D007877 ORTHO05D009957 2.7e-124 448.7 241 93.8
CARHR282940 Cardamine hirsuta HOM05D007877 ORTHO05D009957 2.6e-122 442.2 240 91.7
ATMG00570 Arabidopsis thaliana HOM05D007877 ORTHO05D009957 2.4e-120 435.6 240 90.8
Zm00001eb436210 Zea mays HOM05D007877 ORTHO05D009957 9.1e-120 433.7 241 90.5
Zm00001eb436260 Zea mays HOM05D007877 ORTHO05D009957 9.1e-120 433.7 241 90.5
Zm00001eb436450 Zea mays HOM05D007877 ORTHO05D009957 9.1e-120 433.7 241 90.5
Zm00001eb436490 Zea mays HOM05D007877 ORTHO05D009957 9.1e-120 433.7 241 90.5
Zm00001eb441030 Zea mays HOM05D007877 ORTHO05D009957 9.1e-120 433.7 241 90.5
Aa31csc239G30 Aethionema arabicum HOM05D007877 ORTHO05D009957 1.0e-118 430.3 240 89.6
CsaV3_UNG208000 Cucumis sativus L. HOM05D007877 ORTHO05D009957 8.8e-115 417.2 229 90.8
Lalb_Chr00c29g0408181 Lupinus albus HOM05D007877 ORTHO05D009957 1.2e-111 406.8 223 91.9
Lalb_Chr22g0358751 Lupinus albus HOM05D007877 ORTHO05D009957 1.2e-111 406.8 223 91.9
TPR.G17000 Trifolium pratense HOM05D007877 ORTHO05D009957 2.5e-109 399.1 215 93.0
LjContig00315g0025322 Lotus japonicus HOM05D007877 ORTHO05D009957 4.4e-106 388.3 241 85.1
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 9.8e-106 387.1 239 84.5
HanXRQChr00c0234g0572751 Helianthus annuus HOM05D007877 ORTHO05D009957 2.3e-102 375.9 196 96.4
Thhalv10015628m.g Eutrema salsugineum HOM05D007877 ORTHO05D009957 1.3e-94 350.1 240 77.5
Gohir.A01G022475 Gossypium hirsutum HOM05D007877 ORTHO05D009957 8.1e-92 340.9 177 93.8
SHI55214 Sapria himalayana HOM05D007877 ORTHO05D009957 5.8e-90 334.7 212 82.1
SEGI_02417 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 7.3e-77 291.2 217 71.4
PSO541G3164 Papaver somniferum HOM05D007877 ORTHO05D009957 4.7e-76 288.5 219 67.1
PSO384G0556 Papaver somniferum HOM05D007877 ORTHO05D009957 6.2e-76 288.1 219 67.6
PSO133G0099 Papaver somniferum HOM05D007877 ORTHO05D009957 4.0e-75 285.4 219 67.1
Peaxi162Scf00508g00001 Petunia axillaris HOM05D007877 ORTHO05D009957 4.0e-75 285.4 226 71.7
Nitab4.5_0009703g0110 Nicotiana tabacum HOM05D007877 ORTHO05D009957 5.6e-69 265.0 199 75.4
Nitab4.5_0000172g2240 Nicotiana tabacum HOM05D007877 ORTHO05D009957 9.6e-69 264.2 149 87.9
Solyc00g500237.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.8e-67 260.0 152 90.8
arahy.Tifrunner.gnm1.ann1.SK2G41 Arachis hypogaea HOM05D007877 ORTHO05D009957 1.4e-64 250.4 143 90.2
C04p19590 Brassica napus HOM05D007877 ORTHO05D009957 1.3e-62 243.8 151 85.4
AUR62042354 Chenopodium quinoa HOM05D000743 ORTHO05D000580 6.9e-59 231.5 241 58.1
AUR62043788 Chenopodium quinoa HOM05D000743 ORTHO05D000580 6.9e-59 231.5 241 58.1
HanXRQChr01g0007101 Helianthus annuus HOM05D007877 ORTHO05D009957 1.2e-58 230.7 126 88.9
Lsat_1_v5_gn_2_125060 Lactuca sativa HOM05D007877 ORTHO05D009957 1.5e-58 230.3 123 97.6
BolC4t23493H Brassica oleracea HOM05D007877 ORTHO05D009957 3.2e-56 222.6 124 92.7
TAR371G0168 Trochodendron aralioides HOM05D007877 ORTHO05D009957 1.8e-54 216.9 116 98.3
CAN.G1159.16 Capsicum annuum HOM05D007877 ORTHO05D009957 2.3e-54 216.5 123 92.7
BraSC48t46272Z Brassica rapa HOM05D007877 ORTHO05D009957 8.1e-52 208.0 115 93.9
BraSC177t45764Z Brassica rapa HOM05D007877 ORTHO05D009957 1.4e-51 207.2 115 93.9
Phvul.005G124700 Phaseolus vulgaris HOM05D007877 ORTHO05D009957 1.2e-50 204.1 158 72.8
Lsat_1_v5_gn_9_49261 Lactuca sativa HOM05D007877 ORTHO05D009957 1.4e-48 197.2 107 97.2
Solyc12g035750.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.2e-47 194.1 135 74.1
Aqoxy12s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 3.3e-45 186.0 116 87.1
Aqoxy38s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 3.3e-45 186.0 116 87.1
MD15G1309600 Malus domestica HOM05D007877 ORTHO05D009957 5.7e-45 185.3 107 82.2
Aqoxy1G02979 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 2.1e-44 183.3 116 86.2
RhsimMtG0001700 Rhododendron simsii HOM05D007877 ORTHO05D009957 7.9e-39 164.9 90 96.7
RhsimMtG0004900 Rhododendron simsii HOM05D007877 ORTHO05D009957 7.9e-39 164.9 90 96.7
unitig_87.g27972 Utricularia gibba HOM05D007877 ORTHO05D009957 2.5e-37 159.8 92 90.2
Psat0s1774g0160 Pisum sativum HOM05D007877 ORTHO05D009957 5.7e-37 158.7 98 87.8
AUR62026822 Chenopodium quinoa HOM05D000743 ORTHO05D000580 2.4e-35 153.3 88 92.0
SEGI_25147 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 6.9e-35 151.8 117 70.9
Glyma.U026900 Glycine max HOM05D007877 ORTHO05D009957 2.6e-34 149.8 225 44.4
Nitab4.5_0004471g0150 Nicotiana tabacum HOM05D007877 ORTHO05D009957 7.9e-31 138.3 104 76.0
Solyc10g062060.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 6.7e-30 135.2 83 79.5
BraSC77t46652Z Brassica rapa HOM05D007877 ORTHO05D009957 8.8e-30 134.8 76 93.4
CARHR288300 Cardamine hirsuta HOM05D007877 ORTHO05D009957 2.6e-29 133.3 69 97.1
Solyc05g023970.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.4e-29 132.5 124 65.3
Solyc10g062070.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.8e-27 127.1 89 77.5
AUR62043917 Chenopodium quinoa HOM05D000743 ORTHO05D000580 9.1e-27 124.8 119 60.5
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 2.6e-26 123.2 71 93.0
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 7.7e-26 121.7 111 63.1
EL10Ac8g19721 Beta vulgaris HOM05D007877 ORTHO05D009957 1.3e-25 120.9 95 70.5
Solyc04g049250.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.1e-24 117.9 122 58.2
Nn1g10077 Nelumbo nucifera HOM05D007877 ORTHO05D009957 7.2e-24 115.2 63 96.8
Nn1g10099 Nelumbo nucifera HOM05D007877 ORTHO05D009957 7.2e-24 115.2 63 96.8
CAN.G628.86 Capsicum annuum HOM05D007877 ORTHO05D009957 1.8e-22 110.5 56 92.9
SHI48166 Sapria himalayana HOM05D007877 ORTHO05D009957 3.9e-22 109.4 184 42.4
Psat0s552g0160 Pisum sativum HOM05D007877 ORTHO05D009957 1.3e-20 104.4 62 85.5
SHI32359 Sapria himalayana HOM05D007877 ORTHO05D009957 4.1e-19 99.4 98 57.1
Nitab4.5_0000010g0230 Nicotiana tabacum HOM05D007877 ORTHO05D009957 2.0e-18 97.1 72 73.6
Ca_26709_v3 Cicer arietinum L. HOM05D010881 ORTHO05D026827 7.7e-18 95.1 49 89.8
C09p31620 Brassica napus HOM05D007877 ORTHO05D009957 1.5e-16 90.9 53 86.8
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 5.5e-16 89.0 68 75.0
Solyc05g023960.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 6.1e-15 85.5 49 79.6
BolC6t36215H Brassica oleracea HOM05D007877 ORTHO05D009957 1.0e-14 84.7 60 76.7
Nitab4.5_0015438g0010 Nicotiana tabacum HOM05D007877 ORTHO05D009957 8.8e-14 81.6 71 57.7
Peaxi162Scf00931g00018 Petunia axillaris HOM05D007877 ORTHO05D009957 9.7e-13 78.2 44 95.5
ClCG05G014110 Citrullus lanatus HOM05D007877 ORTHO05D009957 7.0e-11 72.0 45 84.4
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 1.7e-09 67.4 53 69.8
SHI24736 Sapria himalayana HOM05D007877 ORTHO05D009957 6.5e-09 65.5 43 72.1
Nitab4.5_0001681g0060 Nicotiana tabacum HOM05D007877 ORTHO05D009957 1.2e-07 61.2 53 66.0


User provided reference genes

Program Settings