Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 3.0e-110 401.7 191 100.0
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 4.6e-106 387.9 189 97.4
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 8.6e-105 383.6 189 95.8
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 8.6e-105 383.6 189 96.3
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.1e-104 383.3 189 96.8
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.1e-104 383.3 189 96.8
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 1.9e-104 382.5 189 96.3
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 1.9e-104 382.5 189 96.3
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 2.5e-104 382.1 189 96.3
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 2.5e-104 382.1 189 96.3
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 7.3e-104 380.6 189 96.3
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 7.3e-104 380.6 189 96.3
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 7.3e-104 380.6 189 96.3
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 1.2e-103 379.8 189 95.8
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.6e-103 379.4 189 95.8
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 2.1e-103 379.0 189 95.8
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 2.1e-103 379.0 189 95.8
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 4.7e-103 377.9 188 94.7
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.4e-102 376.3 189 95.2
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.4e-102 376.3 189 95.2
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 1.8e-102 375.9 189 94.7
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.1e-102 375.2 188 93.6
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 3.1e-102 375.2 189 94.7
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.2e-101 373.2 189 94.2
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 1.2e-101 373.2 189 94.7
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 1.2e-101 373.2 189 94.7
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 1.2e-101 373.2 189 94.7
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 2.2e-100 369.0 189 93.1
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 2.9e-100 368.6 189 93.1
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 4.9e-100 367.9 189 93.7
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 6.4e-100 367.5 188 93.1
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.4e-99 366.3 182 95.6
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.7e-98 362.1 179 95.5
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.7e-97 359.4 189 92.1
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 2.3e-97 359.0 189 91.0
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 3.3e-96 355.1 170 100.0
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 2.1e-95 352.4 170 99.4
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 8.1e-95 350.5 188 88.3
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.7e-92 342.8 168 97.6
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 8.3e-92 340.5 168 96.4
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 3.2e-91 338.6 186 87.1
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 3.2e-91 338.6 186 87.1
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 7.1e-91 337.4 166 97.0
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 9.2e-91 337.0 168 96.4
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 2.7e-90 335.5 168 95.8
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 3.5e-90 335.1 167 96.4
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.6e-90 334.7 168 95.8
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.6e-90 334.7 168 95.8
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 7.8e-90 334.0 168 95.2
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 5.1e-89 331.3 168 95.2
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 5.1e-89 331.3 168 94.6
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 5.1e-89 331.3 168 94.6
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 1.9e-88 329.3 168 94.0
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 2.5e-88 328.9 165 95.2
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 4.4e-85 318.2 185 83.2
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 9.9e-85 317.0 168 91.1
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-84 315.5 175 88.0
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 8.4e-84 313.9 160 93.1
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 7.1e-83 310.8 163 92.0
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-82 308.5 168 88.1
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 3.0e-81 305.4 164 90.2
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 8.6e-81 303.9 168 88.7
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 5.6e-80 301.2 189 80.4
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-79 300.1 179 82.7
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-79 298.9 165 87.3
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 3.6e-79 298.5 178 81.5
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 8.1e-79 297.4 164 87.2
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 6.9e-78 294.3 175 81.7
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 6.4e-76 287.7 153 91.5
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-75 286.2 164 86.0
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-75 286.2 188 73.4
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 7.1e-75 284.3 165 86.1
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 9.3e-75 283.9 167 84.4
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 1.0e-73 280.4 168 82.1
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 5.1e-73 278.1 139 96.4
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 5.1e-73 278.1 139 96.4
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 6.9e-70 267.7 133 96.2
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-68 263.5 136 94.1
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-68 260.8 155 83.2
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-67 259.2 135 92.6
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-65 252.3 142 85.9
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-64 250.0 136 89.7
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-64 250.0 136 89.7
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-64 249.2 132 90.9
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 4.3e-64 248.4 168 77.4
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-63 245.0 131 89.3
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-62 241.5 146 81.5
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-60 236.5 136 86.0
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 6.4e-60 234.6 128 89.8
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 2.4e-59 232.6 190 66.3
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 7.9e-58 227.6 190 65.8
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 1.0e-57 227.3 136 83.1
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 6.7e-57 224.6 135 83.7
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-56 222.6 127 85.8
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-55 218.0 135 83.0
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 2.4e-54 216.1 185 62.7
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 5.8e-53 211.5 111 91.0
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.3e-52 210.3 148 73.0
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 1.1e-51 207.2 112 90.2
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 9.3e-51 204.1 107 91.6
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 2.7e-50 202.6 98 96.9
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 4.6e-50 201.8 97 97.9
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 1.8e-49 199.9 97 96.9
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.8e-49 199.9 97 96.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 2.3e-49 199.5 96 97.9
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 3.9e-49 198.7 129 79.1
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 9.6e-48 194.1 102 90.2
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 1.3e-47 193.7 109 87.2
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 1.3e-47 193.7 146 61.6
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.8e-46 189.9 147 59.2
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-46 188.7 113 84.1
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-44 183.0 96 89.6
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.1e-43 180.6 143 65.7
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-43 179.9 98 87.8
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 9.3e-43 177.6 94 89.4
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.7e-42 176.0 97 86.6
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.0e-41 172.6 102 82.4
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.7e-41 171.0 108 78.7
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 8.7e-41 171.0 79 98.7
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 3.7e-39 165.6 89 89.9
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-37 160.6 164 56.1
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-37 159.5 146 59.6
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-35 153.7 170 51.2
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 7.2e-35 151.4 85 83.5
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 7.2e-35 151.4 85 83.5
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 9.4e-35 151.0 72 97.2
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 9.4e-35 151.0 72 97.2
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 1.2e-34 150.6 74 93.2
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 6.1e-34 148.3 72 95.8
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 6.1e-34 148.3 72 95.8
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 6.1e-34 148.3 72 95.8
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 6.1e-34 148.3 72 95.8
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-33 146.4 81 85.2
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 3.9e-33 145.6 71 94.4
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 6.7e-33 144.8 175 44.6
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 6.7e-33 144.8 150 55.3
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.4e-32 141.4 72 91.7
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 2.8e-31 139.4 86 76.7
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 8.2e-31 137.9 68 91.2
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-31 137.9 72 88.9
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-30 137.5 136 58.8
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-30 137.5 136 58.8
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-30 136.7 72 88.9
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-30 135.6 72 88.9
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-30 135.2 72 88.9
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-30 135.2 72 87.5
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 6.9e-30 134.8 72 87.5
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.5e-29 133.7 72 86.1
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-29 132.1 72 86.1
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-28 131.0 68 89.7
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-28 131.0 72 86.1
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-27 127.1 71 85.9
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-27 126.7 72 84.7
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 3.2e-27 125.9 64 95.3
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-27 125.6 72 84.7
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 7.9e-26 121.3 72 81.9
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 5.7e-24 115.2 57 93.0
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.4e-22 109.8 69 78.3
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.0e-22 108.2 62 82.3
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 5.9e-21 105.1 59 89.8
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 2.9e-20 102.8 61 86.9
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 1.1e-19 100.9 51 92.2
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.7e-18 96.3 72 68.1
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-17 92.0 69 68.1
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-16 89.0 111 48.6
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 9.7e-16 87.8 56 76.8
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 5.3e-14 82.0 43 90.7
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-13 80.9 181 34.8
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 4.5e-13 79.0 45 80.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-11 73.2 50 72.0
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 1.2e-08 64.3 30 93.3
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.0e-08 63.5 35 82.9
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 9.8e-08 61.2 30 93.3
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-07 60.5 34 82.4
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-07 58.5 33 84.8
Medtr8g059730 Medicago truncatula HOM05D001560 ORTHO05D004675 1.8e-06 57.0 43 58.1
PSO302G0237 Papaver somniferum HOM05D001033 ORTHO05D004888 7.0e-06 55.1 138 29.7


User provided reference genes

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