Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032428 Daucus carota HOM05D007924 ORTHO05D010328 1.5e-89 332.8 160 100.0
HanXRQMTg0579161 Helianthus annuus HOM05D007924 ORTHO05D010328 7.0e-84 313.9 160 94.4
Lj2P1227T93 Lonicera japonica HOM05D007924 ORTHO05D010328 9.1e-84 313.5 160 93.8
GSVIVG01000955001 Vitis vinifera HOM05D007924 ORTHO05D010328 4.2e-81 304.7 160 91.9
Nn1g10039 Nelumbo nucifera HOM05D007924 ORTHO05D010328 1.6e-80 302.8 160 91.2
PGR028G0018 Punica granatum HOM05D007924 ORTHO05D010328 4.7e-80 301.2 156 92.9
RhsimMtG0003200 Rhododendron simsii HOM05D007924 ORTHO05D010328 6.8e-79 297.4 156 91.0
Sed0020154 Sechium edule HOM05D007924 ORTHO05D010328 1.2e-78 296.6 160 89.4
CSS0018158 Camellia sinensis var. sinensis HOM05D007924 ORTHO05D010328 1.5e-78 296.2 160 89.4
SGA_v2.0_scaffold575G53004 Striga asiatica HOM05D007924 ORTHO05D010328 1.5e-78 296.2 160 87.5
PGSC0003DMG400011350 Solanum tuberosum HOM05D007924 ORTHO05D010328 6.3e-77 290.8 160 88.1
Nn1g10153 Nelumbo nucifera HOM05D007924 ORTHO05D010328 4.1e-76 288.1 149 92.6
CANSAT16G0013 Cannabis sativa HOM05D007924 ORTHO05D010328 7.0e-76 287.3 160 86.9
CAN.G1180.17 Capsicum annuum HOM05D007924 ORTHO05D010328 2.0e-75 285.8 160 86.9
RcHm_v2.0_Chr6g0257961 Rosa chinensis HOM05D007924 ORTHO05D010328 5.9e-75 284.3 160 86.2
RcHm_v2.0_MTg0498901 Rosa chinensis HOM05D007924 ORTHO05D010328 5.9e-75 284.3 160 86.2
LjContig00315g0007302 Lotus japonicus HOM05D007924 ORTHO05D010328 5.0e-74 281.2 155 87.1
TPR.G7050 Trifolium pratense HOM05D007924 ORTHO05D010328 6.6e-74 280.8 155 87.1
Lalb_Chr00c24g0406701 Lupinus albus HOM05D007924 ORTHO05D010328 6.1e-72 274.2 155 85.8
Duzib116G0340 Durio zibethinus HOM05D007924 ORTHO05D010328 1.4e-71 273.1 156 85.3
SHI38116 Sapria himalayana HOM05D007924 ORTHO05D010328 9.8e-70 266.9 159 83.6
Lj3g0001131 Lotus japonicus HOM05D007924 ORTHO05D010328 1.4e-68 263.1 155 82.6
Nitab4.5_0003945g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 2.7e-67 258.8 160 81.2
AT2G07707 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 3.0e-66 255.4 159 81.8
ATMG00480 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 3.0e-66 255.4 159 81.8
CARHR282860 Cardamine hirsuta HOM05D007924 ORTHO05D010328 3.0e-66 255.4 159 81.8
BraSC48t46292Z Brassica rapa HOM05D007924 ORTHO05D010328 8.6e-66 253.8 159 81.1
BraSC48t46309Z Brassica rapa HOM05D007924 ORTHO05D010328 8.6e-66 253.8 159 81.1
Thhalv10029138m.g Eutrema salsugineum HOM05D007924 ORTHO05D010328 1.6e-64 249.6 159 79.9
CAN.G1001.34 Capsicum annuum HOM05D007924 ORTHO05D010328 4.7e-64 248.1 160 78.1
BolC1t03437H Brassica oleracea HOM05D007924 ORTHO05D010328 7.5e-62 240.7 159 78.0
Lalb_Chr14g0363841 Lupinus albus HOM05D007924 ORTHO05D010328 2.1e-59 232.6 155 76.1
HanXRQMTg0579521 Helianthus annuus HOM05D007924 ORTHO05D010328 3.9e-58 228.4 142 81.7
Nitab4.5_0000172g0710 Nicotiana tabacum HOM05D007924 ORTHO05D010328 5.1e-58 228.0 156 74.4
Ca_03774_v3 Cicer arietinum L. HOM05D007924 ORTHO05D010328 9.9e-54 213.8 123 84.6
Gorai.001G164500 Gossypium raimondii HOM05D007924 ORTHO05D010328 8.3e-53 210.7 122 82.8
Nitab4.5_0028251g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.0e-50 203.8 145 74.5
Oeu018666.1 Olea europaea HOM05D007924 ORTHO05D010328 4.3e-49 198.4 101 93.1
Nitab4.5_0000844g0160 Nicotiana tabacum HOM05D007924 ORTHO05D010328 4.0e-47 191.8 128 74.2
CsaV3_5G016970 Cucumis sativus L. HOM05D007924 ORTHO05D010328 4.9e-45 184.9 114 79.8
SabraMtG0001000 Salix brachista HOM05D007924 ORTHO05D010328 1.9e-44 183.0 116 80.2
RcHm_v2.0_MTg0499211 Rosa chinensis HOM05D007924 ORTHO05D010328 3.5e-43 178.7 101 83.2
HanXRQChr00c0055g0571411 Helianthus annuus HOM05D007924 ORTHO05D010328 7.8e-43 177.6 88 96.6
HanXRQChr09g0250631 Helianthus annuus HOM05D007924 ORTHO05D010328 3.6e-40 168.7 88 93.2
CsaV3_5G015830 Cucumis sativus L. HOM05D007924 ORTHO05D010328 1.4e-36 156.8 97 78.4
HanXRQChr15g0468771 Helianthus annuus HOM05D007924 ORTHO05D010328 2.1e-35 152.9 79 92.4
Nitab4.5_0003222g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.3e-32 143.7 113 65.5
Cfa023001 Carpinus fangiana HOM05D007924 ORTHO05D010328 3.6e-32 142.1 74 87.8
CsaV3_UNG210380 Cucumis sativus L. HOM05D007924 ORTHO05D010328 5.3e-31 138.3 84 79.8
BolSC28t60326H Brassica oleracea HOM05D007924 ORTHO05D011743 2.0e-30 136.3 83 77.1
BraSC159t45717Z Brassica rapa HOM05D007924 ORTHO05D010328 2.0e-30 136.3 83 77.1
arahy.Tifrunner.gnm1.ann1.I8TN6N Arachis hypogaea HOM05D007924 ORTHO05D010328 3.8e-29 132.1 74 85.1
Nitab4.5_0004553g0090 Nicotiana tabacum HOM05D007924 ORTHO05D010328 7.1e-28 127.9 81 76.5
C01p34680 Brassica napus HOM05D007924 ORTHO05D010328 4.6e-27 125.2 83 72.3
Phvul.011G125800 Phaseolus vulgaris HOM05D007924 ORTHO05D010328 3.1e-23 112.5 62 85.5
Nitab4.5_0000172g1200 Nicotiana tabacum HOM05D007924 ORTHO05D007069 3.4e-22 109.0 72 76.4
BraSC48t46342Z Brassica rapa HOM05D007924 ORTHO05D010328 9.3e-20 100.9 71 69.0
PGSC0003DMG400013141 Solanum tuberosum HOM05D007924 ORTHO05D010328 1.2e-19 100.5 58 84.5
CsaV3_3G039780 Cucumis sativus L. HOM05D000558 ORTHO05D006060 3.5e-19 99.0 64 78.1
BolSC28t60430H Brassica oleracea HOM05D007924 ORTHO05D010328 6.0e-19 98.2 51 88.2
Nitab4.5_0002418g0260 Nicotiana tabacum HOM05D007924 ORTHO05D010328 6.7e-18 94.7 58 79.3
Nitab4.5_0002734g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.1e-15 87.4 57 75.4
MD02G1208400 Malus domestica HOM05D007924 ORTHO05D010328 1.2e-14 84.0 44 86.4
SHI38118 Sapria himalayana HOM05D007924 ORTHO05D010328 1.2e-14 84.0 49 77.6
SHI34938 Sapria himalayana HOM05D007924 ORTHO05D010328 1.5e-14 83.6 74 63.5
Ah.02g118920 Amaranthus hybridus HOM05D005794 ORTHO05D006814 7.1e-12 74.7 45 82.2
Potri.011G045912 Populus trichocarpa HOM05D007924 ORTHO05D010328 4.6e-11 72.0 69 55.1
A06p10930 Brassica napus HOM05D007924 ORTHO05D010328 2.6e-06 56.2 38 65.8
Lalb_Chr00c24g0406881 Lupinus albus HOM05D002965 ORTHO05D010536 4.5e-06 55.5 27 88.9


User provided reference genes

Program Settings