Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029995 Daucus carota HOM05D003193 ORTHO05D023334 3.8e-38 161.0 80 100.0
DCAR_032356 Daucus carota HOM05D003193 ORTHO05D023334 3.8e-38 161.0 80 100.0
DCAR_029994 Daucus carota HOM05D003193 ORTHO05D004924 8.2e-33 143.3 73 94.5
GSVIVG01026340001 Vitis vinifera HOM05D003193 ORTHO05D004924 3.0e-27 124.8 73 75.3
Gohir.D11G253200 Gossypium hirsutum HOM05D003193 ORTHO05D004924 7.4e-26 120.2 72 72.2
Gorai.007G272000 Gossypium raimondii HOM05D003193 ORTHO05D004924 7.4e-26 120.2 72 72.2
Thecc.05G265800 Theobroma cacao HOM05D003193 ORTHO05D004924 1.3e-25 119.4 71 74.6
Duzib177G0185 Durio zibethinus HOM05D003193 ORTHO05D004924 2.8e-25 118.2 71 71.8
Gohir.A11G243500 Gossypium hirsutum HOM05D003193 ORTHO05D004924 8.2e-25 116.7 72 70.8
Lj2C47T5 Lonicera japonica HOM05D003193 ORTHO05D004924 8.2e-25 116.7 73 69.9
Actinidia03821 Actinidia chinensis HOM05D003193 ORTHO05D004924 1.1e-24 116.3 73 67.1
Dinv06951 Davidia involucrata HOM05D003193 ORTHO05D004924 1.4e-24 115.9 76 68.4
CSS0037513 Camellia sinensis var. sinensis HOM05D003193 ORTHO05D004924 1.8e-24 115.5 73 72.6
CSS0043374 Camellia sinensis var. sinensis HOM05D003193 ORTHO05D004924 1.8e-24 115.5 73 72.6
Haze_04475 Corylus avellana HOM05D003193 ORTHO05D004924 2.4e-24 115.2 72 72.2
QL03p032698 Quercus lobata HOM05D003193 ORTHO05D004924 3.1e-24 114.8 74 70.3
CiPaw.07G075200 Carya illinoinensis HOM05D003193 ORTHO05D004924 4.1e-24 114.4 72 70.8
CANSAT54G2238 Cannabis sativa HOM05D003193 ORTHO05D004924 5.3e-24 114.0 73 67.1
AUR62006993 Chenopodium quinoa HOM05D003193 ORTHO05D004924 5.3e-24 114.0 71 66.2
Ciclev10018428m.g Citrus clementina HOM05D003193 ORTHO05D004924 6.9e-24 113.6 73 68.5
Nitab4.5_0018351g0010 Nicotiana tabacum HOM05D003193 ORTHO05D023334 6.9e-24 113.6 71 71.8
Rhsim05G0170000 Rhododendron simsii HOM05D003193 ORTHO05D004924 6.9e-24 113.6 73 64.4
Carub.0012s0016 Capsella rubella HOM05D003193 ORTHO05D004924 9.1e-24 113.2 68 73.5
Solyc04g050510.3 Solanum lycopersicum HOM05D003193 ORTHO05D004924 9.1e-24 113.2 73 69.9
Sopen04g021290 Solanum pennellii HOM05D003193 ORTHO05D004924 9.1e-24 113.2 73 69.9
Migut.F02049 Erythranthe guttata HOM05D003193 ORTHO05D004924 1.2e-23 112.8 73 68.5
Cpa.g.sc51.21 Carica papaya HOM05D003193 ORTHO05D004924 1.5e-23 112.5 73 67.1
Glyma.03G252300 Glycine max HOM05D003193 ORTHO05D004924 1.5e-23 112.5 73 65.8
Peaxi162Scf00071g00269 Petunia axillaris HOM05D003193 ORTHO05D004924 1.5e-23 112.5 74 68.9
TWI60G0900 Tripterygium wilfordii HOM05D003193 ORTHO05D004924 1.5e-23 112.5 72 69.4
TAR636G2059 Trochodendron aralioides HOM05D003193 ORTHO05D004924 1.5e-23 112.5 73 68.5
AUR62000638 Chenopodium quinoa HOM05D003193 ORTHO05D004924 2.0e-23 112.1 71 66.2
Medtr7g116425 Medicago truncatula HOM05D003193 ORTHO05D004924 2.0e-23 112.1 72 69.4
Sabra19G0034100 Salix brachista HOM05D003193 ORTHO05D004924 2.0e-23 112.1 73 67.1
Nitab4.5_0000841g0120 Nicotiana tabacum HOM05D003193 ORTHO05D004924 2.6e-23 111.7 75 66.7
Potri.019G024200 Populus trichocarpa HOM05D003193 ORTHO05D004924 2.6e-23 111.7 73 65.8
Phvul.006G107000 Phaseolus vulgaris HOM05D003193 ORTHO05D004924 4.5e-23 110.9 73 65.8
Glyma.19G249900 Glycine max HOM05D003193 ORTHO05D004924 5.9e-23 110.5 73 65.8
Psat0s4268g0040 Pisum sativum HOM05D003193 ORTHO05D004924 5.9e-23 110.5 73 68.5
TPR.G4710 Trifolium pratense HOM05D003193 ORTHO05D004924 5.9e-23 110.5 73 67.1
CAN.G131.16 Capsicum annuum HOM05D003193 ORTHO05D004924 7.7e-23 110.2 73 68.5
Sc09g0001810 Simmondsia chinensis HOM05D003193 ORTHO05D004924 7.7e-23 110.2 70 67.1
VMungo0540G1922 Vigna mungo HOM05D003193 ORTHO05D004924 7.7e-23 110.2 73 65.8
AT1G64790 Arabidopsis thaliana HOM05D003193 ORTHO05D004924 1.0e-22 109.8 68 72.1
Ca_09471_v3 Cicer arietinum L. HOM05D003193 ORTHO05D004924 1.0e-22 109.8 73 67.1
COL.COLO4_37867 Corchorus olitorius HOM05D003193 ORTHO05D004924 1.3e-22 109.4 72 68.1
MD12G1252000 Malus domestica HOM05D003193 ORTHO05D004924 1.3e-22 109.4 72 69.4
Aa31LG2G2030 Aethionema arabicum HOM05D003193 ORTHO05D004924 1.7e-22 109.0 70 68.6
HanXRQChr05g0145131 Helianthus annuus HOM05D003193 ORTHO05D004924 2.2e-22 108.6 72 68.1
AL2G19160 Arabidopsis lyrata HOM05D003193 ORTHO05D004924 2.9e-22 108.2 68 70.6
MBI07_g08903_MAGBIO Magnolia biondii HOM05D003193 ORTHO05D004924 2.9e-22 108.2 73 64.4
SpUn0003_0310 Schrenkiella parvula HOM05D003193 ORTHO05D004924 2.9e-22 108.2 76 63.2
Lj1g0024446 Lotus japonicus HOM05D003193 ORTHO05D004924 3.8e-22 107.8 73 64.4
Manes.09G146200 Manihot esculenta HOM05D003193 ORTHO05D004924 3.8e-22 107.8 73 64.4
Thhalv10022486m.g Eutrema salsugineum HOM05D003193 ORTHO05D004924 6.5e-22 107.1 69 72.5
SGA_v2.0_scaffold62G21472 Striga asiatica HOM05D003193 ORTHO05D004924 6.5e-22 107.1 73 67.1
THA.LOC104821587 Tarenaya hassleriana HOM05D003193 ORTHO05D004924 6.5e-22 107.1 77 61.0
CsaV3_2G010070 Cucumis sativus L. HOM05D003193 ORTHO05D004924 8.5e-22 106.7 72 63.9
EL10Ac4g09775 Beta vulgaris HOM05D003193 ORTHO05D004924 1.1e-21 106.3 70 64.3
Prupe.6G353600 Prunus persica HOM05D003193 ORTHO05D004924 1.1e-21 106.3 72 65.3
Aqoxy5G00090 Aquilegia oxysepala HOM05D003193 ORTHO05D004924 1.4e-21 105.9 77 61.0
CARHR056140 Cardamine hirsuta HOM05D003193 ORTHO05D004924 1.4e-21 105.9 68 69.1
Lsat_1_v5_gn_9_45981 Lactuca sativa HOM05D003193 ORTHO05D004924 1.4e-21 105.9 69 68.1
BcaB05g23590 Brassica carinata HOM05D003193 ORTHO05D004924 1.9e-21 105.5 68 67.6
BcaC03g16020 Brassica carinata HOM05D003193 ORTHO05D004924 1.9e-21 105.5 68 67.6
A02p23930 Brassica napus HOM05D003193 ORTHO05D004924 1.9e-21 105.5 68 67.6
C02p37720 Brassica napus HOM05D003193 ORTHO05D004924 1.9e-21 105.5 68 67.6
BolC2t09791H Brassica oleracea HOM05D003193 ORTHO05D004924 1.9e-21 105.5 68 67.6
BraA02t07385Z Brassica rapa HOM05D003193 ORTHO05D004924 1.9e-21 105.5 68 67.6
Nn1g03055 Nelumbo nucifera HOM05D003193 ORTHO05D004924 1.9e-21 105.5 73 64.4
Sed0015322 Sechium edule HOM05D003193 ORTHO05D004924 1.9e-21 105.5 72 66.7
RcHm_v2.0_Chr3g0449041 Rosa chinensis HOM05D003193 ORTHO05D004924 2.5e-21 105.1 62 75.8
ECA232G1705 Erigeron canadensis HOM05D003193 ORTHO05D004924 3.2e-21 104.8 69 69.6
FvH4_6g01410 Fragaria vesca HOM05D003193 ORTHO05D004924 3.2e-21 104.8 62 75.8
FAN14G4461 Fragaria x ananassa HOM05D003193 ORTHO05D004924 3.2e-21 104.8 62 75.8
FAN14G5315 Fragaria x ananassa HOM05D003193 ORTHO05D004924 3.2e-21 104.8 62 75.8
arahy.Tifrunner.gnm1.ann1.9XF1RW Arachis hypogaea HOM05D003193 ORTHO05D004924 4.2e-21 104.4 73 64.4
arahy.Tifrunner.gnm1.ann1.ZPSV32 Arachis hypogaea HOM05D003193 ORTHO05D004924 4.2e-21 104.4 73 64.4
PSO764G0333 Papaver somniferum HOM05D003193 ORTHO05D004924 4.2e-21 104.4 73 63.0
TAR365G0326 Trochodendron aralioides HOM05D003193 ORTHO05D004924 4.2e-21 104.4 73 64.4
Cc09_g03080 Coffea canephora HOM05D003193 ORTHO05D004924 7.2e-21 103.6 77 61.0
FAN05G0534 Fragaria x ananassa HOM05D003193 ORTHO05D004924 9.4e-21 103.2 62 74.2
FAN05G3617 Fragaria x ananassa HOM05D003193 ORTHO05D004924 9.4e-21 103.2 62 74.2
Lalb_Chr04g0261971 Lupinus albus HOM05D003193 ORTHO05D004924 9.4e-21 103.2 73 58.9
Mapoly0135s0025 Marchantia polymorpha HOM05D003193 ORTHO05D004924 9.4e-21 103.2 74 63.5
SalBow1G0653 Salvia bowleyana HOM05D003193 ORTHO05D004924 1.2e-20 102.8 73 61.6
SalBow1G3637 Salvia bowleyana HOM05D003193 ORTHO05D004924 1.2e-20 102.8 73 61.6
MD04G1233800 Malus domestica HOM05D003193 ORTHO05D004924 2.1e-20 102.1 74 63.5
FAN02G3021 Fragaria x ananassa HOM05D003193 ORTHO05D004924 4.7e-20 100.9 62 72.6
PSO832G2952 Papaver somniferum HOM05D003193 ORTHO05D004924 4.7e-20 100.9 73 63.0
PGR004G2196 Punica granatum HOM05D003193 ORTHO05D004924 1.0e-19 99.8 72 59.7
Eucgr.H04206 Eucalyptus grandis HOM05D003193 ORTHO05D004924 1.4e-19 99.4 72 61.1
unitig_37.g12282 Utricularia gibba HOM05D003193 ORTHO05D004924 3.9e-19 97.8 72 58.3
HPP92_001295 Vanilla planifolia HOM05D003193 ORTHO05D004924 8.8e-19 96.7 71 60.6
SEGI_04281 Sequoiadendron giganteum HOM05D003193 ORTHO05D004924 1.1e-18 96.3 72 61.1
ATR0787G173 Amborella trichopoda HOM05D003193 ORTHO05D004924 2.0e-18 95.5 71 63.4
CDE09G0101 Ceratophyllum demersum HOM05D003193 ORTHO05D004924 2.0e-18 95.5 68 60.3
Actinidia26096 Actinidia chinensis HOM05D003193 ORTHO05D023334 2.6e-18 95.1 65 61.5
CBR_g28040 Chara braunii HOM05D003193 ORTHO05D004924 2.8e-17 91.7 72 56.9
SMO356G0295 Selaginella moellendorffii HOM05D003193 ORTHO05D004924 1.1e-16 89.7 76 52.6
Pp3c22_8910 Physcomitrium patens HOM05D003193 ORTHO05D004924 1.8e-16 89.0 60 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2455 Anthoceros agrestis HOM05D003193 ORTHO05D004924 3.1e-16 88.2 76 52.6
Os03g0721200 Oryza sativa ssp. japonica HOM05D003193 ORTHO05D004924 7.7e-15 83.6 70 54.3
Zm00001eb055550 Zea mays HOM05D003193 ORTHO05D004924 1.3e-14 82.8 70 54.3
Zm00001eb208190 Zea mays HOM05D003193 ORTHO05D004924 3.2e-13 78.2 69 50.7
vmacro19974 Vaccinium macrocarpon HOM05D003193 ORTHO05D004924 1.4e-11 72.8 48 62.5
ClCG11G010250 Citrullus lanatus HOM05D003193 ORTHO05D004924 1.3e-09 66.2 49 59.2
SHI15636 Sapria himalayana HOM05D003193 ORTHO05D004924 1.4e-08 62.8 52 53.8


User provided reference genes

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