Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028856 Daucus carota HOM05D006545 ORTHO05D007985 3.0e-32 141.4 77 100.0
DCAR_032235 Daucus carota HOM05D006545 ORTHO05D007985 3.0e-32 141.4 77 100.0
Dinv42321 Davidia involucrata HOM05D006545 ORTHO05D007985 4.0e-29 131.0 76 92.1
MSTRG.10562 Avicennia marina HOM05D006545 ORTHO05D007985 5.3e-29 130.6 76 89.5
Dinv36770 Davidia involucrata HOM05D006545 ORTHO05D007985 6.9e-29 130.2 76 92.1
vmacro06292 Vaccinium macrocarpon HOM05D006545 ORTHO05D007985 1.5e-28 129.0 76 90.8
Migut.L01494 Erythranthe guttata HOM05D006545 ORTHO05D007985 3.4e-28 127.9 76 88.2
Potri.004G215200 Populus trichocarpa HOM05D006545 ORTHO05D007985 3.4e-28 127.9 72 94.4
Cfa003081 Carpinus fangiana HOM05D000085 ORTHO05D001460 5.8e-28 127.1 77 87.0
Actinidia29903 Actinidia chinensis HOM05D000085 ORTHO05D001460 7.6e-28 126.7 76 88.2
Cc06_g11430 Coffea canephora HOM05D006545 ORTHO05D007985 1.3e-27 125.9 76 88.2
Manes.16G101800 Manihot esculenta HOM05D006545 ORTHO05D007985 1.3e-27 125.9 77 87.0
Nitab4.5_0000540g0270 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.3e-27 125.9 76 88.2
Lsat_1_v5_gn_7_37040 Lactuca sativa HOM05D006545 ORTHO05D007985 1.7e-27 125.6 76 85.5
Nitab4.5_0008523g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.2e-27 125.2 76 89.5
unitig_85.g27258 Utricularia gibba HOM05D006545 ORTHO05D007985 3.8e-27 124.4 76 85.5
PGR102G1056 Punica granatum HOM05D006545 ORTHO05D007985 4.9e-27 124.0 77 84.4
CiPaw.04G149100 Carya illinoinensis HOM05D006545 ORTHO05D007985 8.4e-27 123.2 77 85.7
CiPaw.03G215100 Carya illinoinensis HOM05D006545 ORTHO05D007985 1.1e-26 122.9 77 85.7
Ciclev10010087m.g Citrus clementina HOM05D006545 ORTHO05D007985 1.1e-26 122.9 77 85.7
Gohir.A05G030100 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.1e-26 122.9 74 87.8
Gohir.D05G031500 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.1e-26 122.9 74 87.8
Gorai.009G031700 Gossypium raimondii HOM05D006545 ORTHO05D007985 1.1e-26 122.9 74 87.8
Thecc.09G088900 Theobroma cacao HOM05D006545 ORTHO05D007985 1.1e-26 122.9 74 87.8
PGSC0003DMG400000279 Solanum tuberosum HOM05D006545 ORTHO05D007985 1.4e-26 122.5 76 86.8
Actinidia19138 Actinidia chinensis HOM05D006545 ORTHO05D007985 1.9e-26 122.1 76 86.8
Nn8g38862 Nelumbo nucifera HOM05D006545 ORTHO05D007985 2.5e-26 121.7 74 89.2
Sabra06G0115900 Salix brachista HOM05D006545 ORTHO05D007985 2.5e-26 121.7 72 88.9
CANSAT56G1499 Cannabis sativa HOM05D006545 ORTHO05D007985 3.2e-26 121.3 77 83.1
CANSAT56G4473 Cannabis sativa HOM05D006545 ORTHO05D007985 3.2e-26 121.3 77 83.1
Manes.03G034000 Manihot esculenta HOM05D006545 ORTHO05D007985 3.2e-26 121.3 77 84.4
Solyc12g008860.3 Solanum lycopersicum HOM05D006545 ORTHO05D007985 3.2e-26 121.3 76 85.5
Sopen12g003790 Solanum pennellii HOM05D006545 ORTHO05D007985 3.2e-26 121.3 76 85.5
Lj4g0002489 Lotus japonicus HOM05D006545 ORTHO05D007985 4.2e-26 120.9 77 83.1
CsaV3_1G040450 Cucumis sativus L. HOM05D006545 ORTHO05D007985 5.5e-26 120.6 77 79.2
ECA240G1755 Erigeron canadensis HOM05D006545 ORTHO05D007985 5.5e-26 120.6 74 82.4
Duzib168G1224 Durio zibethinus HOM05D006545 ORTHO05D007985 7.1e-26 120.2 74 86.5
ClCG03G015590 Citrullus lanatus HOM05D006545 ORTHO05D007985 9.3e-26 119.8 77 77.9
MELO3C015473.2 Cucumis melo HOM05D006545 ORTHO05D007985 9.3e-26 119.8 74 81.1
Potri.006G146800 Populus trichocarpa HOM05D006545 ORTHO05D007985 1.2e-25 119.4 72 86.1
TAR383G1000 Trochodendron aralioides HOM05D006545 ORTHO05D007985 1.2e-25 119.4 74 83.8
GSVIVG01015199001 Vitis vinifera HOM05D006545 ORTHO05D007985 1.2e-25 119.4 74 81.1
Duzib150G0099 Durio zibethinus HOM05D006545 ORTHO05D007985 1.6e-25 119.0 74 86.5
Glyma.13G104200 Glycine max HOM05D006545 ORTHO05D007985 1.6e-25 119.0 77 81.8
Glyma.17G054900 Glycine max HOM05D006545 ORTHO05D007985 1.6e-25 119.0 77 81.8
HanXRQChr12g0363181 Helianthus annuus HOM05D006545 ORTHO05D007985 1.6e-25 119.0 76 81.6
THA.LOC104820022 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 2.1e-25 118.6 77 81.8
Phvul.003G136800 Phaseolus vulgaris HOM05D006545 ORTHO05D007985 2.7e-25 118.2 77 79.2
QL02p062521 Quercus lobata HOM05D006545 ORTHO05D007985 3.5e-25 117.9 76 81.6
Eucgr.C00895 Eucalyptus grandis HOM05D006545 ORTHO05D007985 4.6e-25 117.5 74 81.1
FvH4_1g07510 Fragaria vesca HOM05D006545 ORTHO05D007985 4.6e-25 117.5 77 80.5
FAN19G0384 Fragaria x ananassa HOM05D006545 ORTHO05D007985 4.6e-25 117.5 77 80.5
FAN23G2021 Fragaria x ananassa HOM05D006545 ORTHO05D007985 4.6e-25 117.5 77 80.5
FAN26G0590 Fragaria x ananassa HOM05D006545 ORTHO05D007985 4.6e-25 117.5 77 80.5
unitig_699.g19296 Utricularia gibba HOM05D006545 ORTHO05D007985 4.6e-25 117.5 74 82.4
CDE06G0764 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 6.0e-25 117.1 76 82.9
CDE07G1614 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 6.0e-25 117.1 76 82.9
Gohir.A13G193400 Gossypium hirsutum HOM05D006545 ORTHO05D007985 6.0e-25 117.1 74 83.8
Sc18g0002090 Simmondsia chinensis HOM05D000085 ORTHO05D001460 6.0e-25 117.1 74 83.8
Aa31LG2G20830 Aethionema arabicum HOM05D006545 ORTHO05D007985 7.9e-25 116.7 77 80.5
Prupe.7G209400 Prunus persica HOM05D006545 ORTHO05D007985 7.9e-25 116.7 77 83.1
RcHm_v2.0_Chr2g0093401 Rosa chinensis HOM05D006545 ORTHO05D007985 7.9e-25 116.7 77 80.5
THA.LOC104814622 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 7.9e-25 116.7 77 80.5
TWI34G0024 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 1.0e-24 116.3 77 83.1
Thhalv10026717m.g Eutrema salsugineum HOM05D006545 ORTHO05D007985 1.3e-24 115.9 77 79.2
MBI04_g31162_MAGBIO Magnolia biondii HOM05D006545 ORTHO05D007985 1.3e-24 115.9 74 81.1
Os06g0567000 Oryza sativa ssp. japonica HOM05D006545 ORTHO05D007985 1.3e-24 115.9 77 79.2
Sp7g27510 Schrenkiella parvula HOM05D006545 ORTHO05D007985 1.3e-24 115.9 77 79.2
AL7G22570 Arabidopsis lyrata HOM05D006545 ORTHO05D007985 1.8e-24 115.5 77 79.2
Carub.0007s1077 Capsella rubella HOM05D006545 ORTHO05D007985 1.8e-24 115.5 77 79.2
CARHR237610 Cardamine hirsuta HOM05D006545 ORTHO05D007985 1.8e-24 115.5 77 79.2
Zm00001eb277360 Zea mays HOM05D006545 ORTHO05D007985 1.8e-24 115.5 76 80.3
Gohir.D13G199200 Gossypium hirsutum HOM05D006545 ORTHO05D007985 2.3e-24 115.2 74 82.4
Atru.chr7.1592 Acer truncatum HOM05D006545 ORTHO05D007985 3.9e-24 114.4 77 80.5
AT4G29735 Arabidopsis thaliana HOM05D006545 ORTHO05D007985 3.9e-24 114.4 77 77.9
TWI63G0169 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 3.9e-24 114.4 77 81.8
PSO832G3375 Papaver somniferum HOM05D006545 ORTHO05D007985 6.7e-24 113.6 74 77.0
Nitab4.5_0006552g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 8.7e-24 113.2 75 84.0
AUR62033964 Chenopodium quinoa HOM05D006545 ORTHO05D007985 1.1e-23 112.8 76 81.6
Gorai.013G227700 Gossypium raimondii HOM05D006545 ORTHO05D007985 1.1e-23 112.8 74 81.1
PSO063G6244 Papaver somniferum HOM05D006545 ORTHO05D007985 1.1e-23 112.8 74 77.0
Zm00001eb383910 Zea mays HOM05D006545 ORTHO05D007985 1.5e-23 112.5 77 76.6
AUR62029070 Chenopodium quinoa HOM05D006545 ORTHO05D007985 2.5e-23 111.7 76 80.3
ATR0749G052 Amborella trichopoda HOM05D006545 ORTHO05D007985 3.3e-23 111.3 76 73.7
EL10Ac8g19212 Beta vulgaris HOM05D006545 ORTHO05D007985 4.3e-23 110.9 74 79.7
PSO210G4511 Papaver somniferum HOM05D006545 ORTHO05D007985 4.3e-23 110.9 76 78.9
Aqoxy7G01208 Aquilegia oxysepala HOM05D006545 ORTHO05D007985 5.7e-23 110.5 74 81.1
Psat4g015120 Pisum sativum HOM05D006545 ORTHO05D007985 5.7e-23 110.5 77 79.2
BcaNung00485 Brassica carinata HOM05D006545 ORTHO05D007985 7.4e-23 110.2 77 75.3
PSO210G2413 Papaver somniferum HOM05D006545 ORTHO05D007985 7.4e-23 110.2 76 78.9
Sed0026852 Sechium edule HOM05D006545 ORTHO05D007985 7.4e-23 110.2 77 72.7
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 1.6e-22 109.0 77 77.9
MD02G1079700 Malus domestica HOM05D006545 ORTHO05D007985 1.6e-22 109.0 77 75.3
Medtr4g126270 Medicago truncatula HOM05D000085 ORTHO05D001460 2.1e-22 108.6 77 76.6
A03p59030 Brassica napus HOM05D006545 ORTHO05D007985 2.8e-22 108.2 73 78.1
C03p89150 Brassica napus HOM05D006545 ORTHO05D007985 3.7e-22 107.8 74 77.0
Nitab4.5_0004526g0070 Nicotiana tabacum HOM05D006545 ORTHO05D007985 3.7e-22 107.8 63 92.1
Lalb_Chr13g0299701 Lupinus albus HOM05D006545 ORTHO05D007985 4.8e-22 107.5 77 74.0
A01p08390 Brassica napus HOM05D000125 ORTHO05D000120 8.2e-22 106.7 77 74.0
BraA01t00787Z Brassica rapa HOM05D000125 ORTHO05D000120 8.2e-22 106.7 77 74.0
BcaC01g01182 Brassica carinata HOM05D006545 ORTHO05D007985 1.1e-21 106.3 74 75.7
Ah.09g228260 Amaranthus hybridus HOM05D006545 ORTHO05D007985 1.8e-21 105.5 76 75.0
arahy.Tifrunner.gnm1.ann1.CH1R66 Arachis hypogaea HOM05D006545 ORTHO05D007985 1.8e-21 105.5 77 74.0
arahy.Tifrunner.gnm1.ann1.S1CX09 Arachis hypogaea HOM05D006545 ORTHO05D007985 1.8e-21 105.5 77 74.0
MD15G1207400 Malus domestica HOM05D006545 ORTHO05D007985 1.8e-21 105.5 77 68.8
arahy.Tifrunner.gnm1.ann1.MQ59WG Arachis hypogaea HOM05D000085 ORTHO05D001460 2.4e-21 105.1 74 77.0
Lalb_Chr07g0180851 Lupinus albus HOM05D006545 ORTHO05D007985 2.4e-21 105.1 77 74.0
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 9.0e-21 103.2 74 75.7
BcaC09g51752 Brassica carinata HOM05D006545 ORTHO05D007985 2.6e-20 101.7 77 72.7
BraA03t14963Z Brassica rapa HOM05D006545 ORTHO05D007985 8.5e-19 96.7 95 61.1
SalBow5G5008 Salvia bowleyana HOM05D006545 ORTHO05D007985 1.1e-18 96.3 62 80.6
TAR624G0377 Trochodendron aralioides HOM05D002302 ORTHO05D002728 1.4e-18 95.9 63 79.4
COL.COLO4_18197 Corchorus olitorius HOM05D002302 ORTHO05D002728 1.9e-18 95.5 63 81.0
Nitab4.5_0004223g0010 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.9e-18 95.5 60 83.3
C07p57080 Brassica napus HOM05D006545 ORTHO05D007985 2.5e-18 95.1 63 81.0
HPP92_008778 Vanilla planifolia HOM05D006545 ORTHO05D007985 3.2e-18 94.7 61 75.4
Mapoly0003s0235 Marchantia polymorpha HOM05D006545 ORTHO05D007985 4.2e-18 94.4 73 68.5
BolC7t46179H Brassica oleracea HOM05D006545 ORTHO05D007985 9.3e-18 93.2 99 57.6
FAN26G2289 Fragaria x ananassa HOM05D006545 ORTHO05D007985 2.1e-17 92.0 63 73.0
BcaC09g52224 Brassica carinata HOM05D006545 ORTHO05D007985 3.6e-17 91.3 63 77.8
C01p09720 Brassica napus HOM05D006545 ORTHO05D007985 1.0e-16 89.7 99 55.6
HanXRQChr12g0377121 Helianthus annuus HOM05D006545 ORTHO05D007985 3.0e-16 88.2 56 82.1
Pp3c11_23220 Physcomitrium patens HOM05D006545 ORTHO05D007985 3.9e-16 87.8 73 67.1
Nitab4.5_0000095g0160 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.5e-15 85.1 71 67.6
C01p09580 Brassica napus HOM05D000125 ORTHO05D007985 1.3e-14 82.8 63 74.6
SMO361G0088 Selaginella moellendorffii HOM05D006545 ORTHO05D007985 1.6e-14 82.4 72 58.3
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 4.1e-13 77.8 47 89.4
C01p09620 Brassica napus HOM05D006545 ORTHO05D007985 5.0e-11 70.9 94 52.1
Lj7C676T8 Lonicera japonica HOM05D006545 ORTHO05D007985 4.2e-10 67.8 37 94.6
A08p19550 Brassica napus HOM05D006545 ORTHO05D007985 9.4e-10 66.6 46 76.1
BcaB03g12615 Brassica carinata HOM05D006545 ORTHO05D007985 7.9e-09 63.5 47 66.0
Actinidia25251 Actinidia chinensis HOM05D006545 ORTHO05D007985 3.3e-07 58.2 46 76.1
Pp3c7_2400 Physcomitrium patens HOM05D006545 ORTHO05D007985 7.4e-07 57.0 128 35.9
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 1.7e-06 55.8 32 84.4


User provided reference genes

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