Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 5.0e-173 610.9 291 100.0
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 1.1e-116 423.7 290 67.2
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 2.9e-112 409.1 298 62.4
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 8.5e-112 407.5 293 64.2
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 4.2e-111 405.2 304 63.5
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 5.1e-109 398.3 303 63.4
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 1.1e-108 397.1 294 63.6
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 2.0e-108 396.4 297 61.3
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 2.5e-108 396.0 297 60.9
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 4.3e-108 395.2 288 64.2
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 9.7e-108 394.0 297 62.6
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 1.7e-107 393.3 300 61.3
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 2.8e-107 392.5 287 63.1
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 3.7e-107 392.1 281 64.4
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 1.4e-106 390.2 300 61.7
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 2.4e-106 389.4 293 61.4
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 5.3e-106 388.3 303 58.1
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 9.1e-106 387.5 296 61.5
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 1.2e-105 387.1 296 59.5
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 2.6e-105 386.0 300 58.0
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 4.5e-105 385.2 296 60.1
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 7.7e-105 384.4 293 60.1
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 7.7e-105 384.4 299 58.2
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 1.7e-104 383.3 296 57.8
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 2.2e-104 382.9 294 61.6
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 2.9e-104 382.5 298 61.1
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 3.8e-104 382.1 289 63.0
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 1.1e-103 380.6 300 59.3
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 1.1e-103 380.6 294 61.6
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 1.1e-103 380.6 297 59.6
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 1.4e-103 380.2 289 63.0
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 3.2e-103 379.0 294 59.5
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 4.2e-103 378.6 328 56.4
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 5.5e-103 378.3 288 62.2
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 7.2e-103 377.9 295 61.0
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 1.2e-102 377.1 299 60.9
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 1.6e-102 376.7 303 58.7
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 2.1e-102 376.3 286 60.8
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 2.7e-102 375.9 295 57.3
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 3.6e-102 375.6 294 58.5
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 3.6e-102 375.6 322 57.1
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 4.7e-102 375.2 288 60.4
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 6.1e-102 374.8 294 59.9
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 6.1e-102 374.8 294 59.9
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 7.9e-102 374.4 297 58.6
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 7.9e-102 374.4 292 61.0
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 1.4e-101 373.6 294 59.2
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 1.4e-101 373.6 294 59.9
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 3.9e-101 372.1 303 57.4
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 5.1e-101 371.7 297 56.9
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 3.3e-100 369.0 314 58.3
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 4.4e-100 368.6 309 57.6
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 4.4e-100 368.6 304 57.6
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 1.3e-99 367.1 296 57.4
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 4.8e-99 365.2 288 60.1
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 6.3e-99 364.8 297 57.2
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 6.3e-99 364.8 300 56.7
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 8.2e-99 364.4 300 58.3
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 1.1e-98 364.0 299 56.5
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.8e-98 363.2 293 60.1
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 2.4e-98 362.8 334 53.9
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 2.4e-98 362.8 290 58.6
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 3.1e-98 362.5 295 56.3
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 5.3e-98 361.7 298 57.4
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 9.1e-98 360.9 295 57.6
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 1.2e-97 360.5 295 58.0
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 2.0e-97 359.8 300 57.0
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.5e-97 358.6 295 57.6
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 2.2e-96 356.3 288 58.3
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 6.5e-96 354.8 284 60.2
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 2.5e-95 352.8 297 58.6
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 9.4e-95 350.9 277 59.6
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 2.7e-94 349.4 284 58.5
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 2.7e-94 349.4 284 58.5
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 2.7e-94 349.4 285 58.9
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 4.7e-94 348.6 284 58.5
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 6.1e-94 348.2 280 56.4
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 8.0e-94 347.8 291 57.0
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.0e-93 347.4 320 53.4
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 1.4e-93 347.1 281 58.4
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 1.4e-93 347.1 287 57.5
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 1.8e-93 346.7 277 59.2
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 3.0e-93 345.9 299 55.9
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 3.0e-93 345.9 289 57.1
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 3.9e-93 345.5 296 55.7
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 6.7e-93 344.7 310 54.8
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 8.8e-93 344.4 287 57.1
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 1.1e-92 344.0 414 43.7
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 7.4e-92 341.3 287 56.8
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 4.8e-91 338.6 278 56.5
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 3.1e-90 335.9 258 61.6
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 2.5e-87 326.2 437 41.4
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 1.8e-85 320.1 295 53.2
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 4.0e-85 318.9 280 53.9
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 2.6e-84 316.2 284 53.2
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 2.4e-82 309.7 279 53.8
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 1.0e-77 294.3 283 50.2
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 1.4e-77 293.9 277 50.2
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.8e-74 283.5 292 45.9
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 4.4e-68 262.3 221 57.0
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 1.3e-67 260.8 293 45.4
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 6.8e-61 238.4 295 39.7
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 1.6e-54 217.2 179 53.6
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 5.2e-53 212.2 283 40.3
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.6e-49 200.7 256 40.6
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 5.6e-47 192.2 137 59.9
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 7.3e-39 165.2 114 65.8
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 1.5e-31 141.0 115 57.4
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 4.8e-30 136.0 91 60.4


User provided reference genes

Program Settings