Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032163 Daucus carota HOM05D003313 ORTHO05D004217 3.4e-121 438.3 223 100.0
DCAR_029313 Daucus carota HOM05D003313 ORTHO05D004217 1.3e-107 393.3 246 84.6
DCAR_029787 Daucus carota HOM05D003313 ORTHO05D004217 6.7e-101 370.9 243 81.1
DCAR_029312 Daucus carota HOM05D003313 ORTHO05D004217 3.0e-93 345.5 223 83.0
DCAR_032260 Daucus carota HOM05D003313 ORTHO05D004217 3.0e-93 345.5 223 83.0
Dinv30970 Davidia involucrata HOM05D003313 ORTHO05D004217 2.2e-91 339.3 243 72.4
Cfa004406 Carpinus fangiana HOM05D003313 ORTHO05D004217 4.8e-91 338.2 243 72.0
Rhsim11G0111700 Rhododendron simsii HOM05D003313 ORTHO05D004217 6.3e-91 337.8 243 72.4
Actinidia17722 Actinidia chinensis HOM05D003313 ORTHO05D004217 8.2e-91 337.4 243 73.3
CSS0008361 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.8e-90 336.3 242 72.7
CSS0011425 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.8e-90 336.3 242 72.7
vmacro01644 Vaccinium macrocarpon HOM05D003313 ORTHO05D004217 1.8e-90 336.3 243 72.4
PSO675G1011 Papaver somniferum HOM05D003313 ORTHO05D004217 9.1e-90 334.0 242 71.9
CAN.G1379.33 Capsicum annuum HOM05D003313 ORTHO05D004217 1.2e-89 333.6 243 72.4
PSO541G4460 Papaver somniferum HOM05D003313 ORTHO05D004217 1.2e-89 333.6 242 71.9
Solyc01g102510.4 Solanum lycopersicum HOM05D003313 ORTHO05D004217 1.6e-89 333.2 243 72.4
Sopen01g044950 Solanum pennellii HOM05D003313 ORTHO05D004217 1.6e-89 333.2 243 72.4
PGSC0003DMG400018227 Solanum tuberosum HOM05D003313 ORTHO05D004217 1.6e-89 333.2 243 72.4
Peaxi162Scf00194g00629 Petunia axillaris HOM05D003313 ORTHO05D004217 2.0e-89 332.8 243 71.6
Cc02_g36830 Coffea canephora HOM05D003313 ORTHO05D004217 2.7e-89 332.4 243 71.2
Nitab4.5_0000399g0070 Nicotiana tabacum HOM05D003313 ORTHO05D004217 2.7e-89 332.4 243 72.0
Nitab4.5_0004090g0090 Nicotiana tabacum HOM05D003313 ORTHO05D004217 2.7e-89 332.4 243 72.0
SGA_v2.0_scaffold311G48230 Striga asiatica HOM05D003313 ORTHO05D004217 2.7e-89 332.4 243 71.2
QL11p018449 Quercus lobata HOM05D003313 ORTHO05D004217 3.5e-89 332.0 243 71.2
CSS0016348 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 4.5e-89 331.6 243 72.0
CSS0044155 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 4.5e-89 331.6 243 72.0
Peaxi162Scf00071g00133 Petunia axillaris HOM05D003313 ORTHO05D004217 1.0e-88 330.5 243 71.6
Oeu016865.1 Olea europaea HOM05D003313 ORTHO05D004217 1.7e-88 329.7 243 71.2
Migut.B00692 Erythranthe guttata HOM05D003313 ORTHO05D004217 2.9e-88 328.9 243 72.0
Ciclev10018511m.g Citrus clementina HOM05D003313 ORTHO05D004217 2.5e-87 325.9 243 70.0
SalBow4G0229 Salvia bowleyana HOM05D003313 ORTHO05D004217 2.5e-87 325.9 243 71.6
SalBow4G1329 Salvia bowleyana HOM05D003313 ORTHO05D004217 2.5e-87 325.9 243 71.6
CANSAT01G1610 Cannabis sativa HOM05D003313 ORTHO05D004217 5.5e-87 324.7 243 69.5
COL.COLO4_07112 Corchorus olitorius HOM05D003313 ORTHO05D004217 5.5e-87 324.7 243 68.7
Sabra06G0061800 Salix brachista HOM05D003313 ORTHO05D004217 1.2e-86 323.6 243 68.3
Duzib150G0949 Durio zibethinus HOM05D003313 ORTHO05D004217 2.1e-86 322.8 243 68.7
GSVIVG01029823001 Vitis vinifera HOM05D003313 ORTHO05D004217 2.1e-86 322.8 243 69.5
Actinidia11708 Actinidia chinensis HOM05D003313 ORTHO05D004217 2.7e-86 322.4 232 72.0
Gohir.A08G082000 Gossypium hirsutum HOM05D003313 ORTHO05D004217 3.6e-86 322.0 243 68.7
Nn3g20244 Nelumbo nucifera HOM05D003313 ORTHO05D004217 3.6e-86 322.0 243 69.5
Thecc.09G202800 Theobroma cacao HOM05D003313 ORTHO05D004217 3.6e-86 322.0 243 68.7
MSTRG.27897 Avicennia marina HOM05D003313 ORTHO05D004217 4.7e-86 321.6 243 69.5
ClCG09G008380 Citrullus lanatus HOM05D003313 ORTHO05D004217 4.7e-86 321.6 243 69.1
CiPaw.01G000400 Carya illinoinensis HOM05D003313 ORTHO05D004217 8.0e-86 320.9 243 69.1
MELO3C021123.2 Cucumis melo HOM05D003313 ORTHO05D004217 8.0e-86 320.9 243 68.7
Gohir.D08G091400 Gossypium hirsutum HOM05D003313 ORTHO05D004217 8.0e-86 320.9 243 68.7
Atru.chr3.2031 Acer truncatum HOM05D003313 ORTHO05D004217 1.0e-85 320.5 243 70.8
Gorai.004G096900 Gossypium raimondii HOM05D003313 ORTHO05D004217 1.0e-85 320.5 243 68.3
TAR624G0023 Trochodendron aralioides HOM05D003313 ORTHO05D004217 1.4e-85 320.1 243 70.0
TAR624G1107 Trochodendron aralioides HOM05D003313 ORTHO05D004217 1.4e-85 320.1 243 70.0
CsaV3_7G026710 Cucumis sativus L. HOM05D003313 ORTHO05D004217 4.0e-85 318.5 243 68.3
Potri.006G081800 Populus trichocarpa HOM05D003313 ORTHO05D004217 4.0e-85 318.5 243 68.3
Sed0021054 Sechium edule HOM05D003313 ORTHO05D004217 4.0e-85 318.5 243 67.9
Manes.11G105500 Manihot esculenta HOM05D003313 ORTHO05D004217 6.8e-85 317.8 243 67.1
unitig_699.g19829 Utricularia gibba HOM05D003313 ORTHO05D004217 8.8e-85 317.4 243 69.1
Lj9C240T5 Lonicera japonica HOM05D003313 ORTHO05D004217 1.2e-84 317.0 243 70.8
Lj1g0026129 Lotus japonicus HOM05D003313 ORTHO05D004217 1.5e-84 316.6 243 69.1
arahy.Tifrunner.gnm1.ann1.9JB77L Arachis hypogaea HOM05D003313 ORTHO05D004217 3.4e-84 315.5 242 67.8
arahy.Tifrunner.gnm1.ann1.XWZQ7T Arachis hypogaea HOM05D003313 ORTHO05D004217 3.4e-84 315.5 242 67.8
MBI07_g10943_MAGBIO Magnolia biondii HOM05D003313 ORTHO05D004217 3.4e-84 315.5 240 67.5
Hund24556 Selenicereus undatus HOM05D003313 ORTHO05D004217 3.4e-84 315.5 243 68.3
Prupe.8G187800 Prunus persica HOM05D003313 ORTHO05D004217 5.7e-84 314.7 242 67.8
TWI38G1822 Tripterygium wilfordii HOM05D003313 ORTHO05D004217 7.5e-84 314.3 243 66.3
Eucgr.B01361 Eucalyptus grandis HOM05D003313 ORTHO05D004217 1.3e-83 313.5 243 67.1
Psat3g015640 Pisum sativum HOM05D003313 ORTHO05D004217 1.3e-83 313.5 243 68.3
TWI39G0913 Tripterygium wilfordii HOM05D003313 ORTHO05D004217 4.8e-83 311.6 243 65.8
THA.LOC104814960 Tarenaya hassleriana HOM05D003313 ORTHO05D004217 6.3e-83 311.2 243 68.7
TPR.G8371 Trifolium pratense HOM05D003313 ORTHO05D004217 1.4e-82 310.1 243 67.5
Aa31LG11G3950 Aethionema arabicum HOM05D003313 ORTHO05D004217 4.1e-82 308.5 243 68.3
Aqoxy1G01346 Aquilegia oxysepala HOM05D003313 ORTHO05D004217 5.4e-82 308.1 250 65.6
FAN24G1237 Fragaria x ananassa HOM05D003313 ORTHO05D004217 5.4e-82 308.1 242 67.4
Sc10g0005440 Simmondsia chinensis HOM05D003313 ORTHO05D004217 5.4e-82 308.1 242 66.5
Sc10g0006280 Simmondsia chinensis HOM05D003313 ORTHO05D004217 5.4e-82 308.1 242 66.5
Lsat_1_v5_gn_7_68120 Lactuca sativa HOM05D003313 ORTHO05D004217 7.0e-82 307.8 249 66.3
MD05G1154700 Malus domestica HOM05D003313 ORTHO05D004217 7.0e-82 307.8 242 65.7
RcHm_v2.0_Chr6g0282501 Rosa chinensis HOM05D003313 ORTHO05D004217 7.0e-82 307.8 242 67.4
FvH4_2g17560 Fragaria vesca HOM05D003313 ORTHO05D004217 9.1e-82 307.4 242 67.4
FAN15G1274 Fragaria x ananassa HOM05D003313 ORTHO05D004217 9.1e-82 307.4 242 67.4
FAN27G0645 Fragaria x ananassa HOM05D003313 ORTHO05D004217 9.1e-82 307.4 242 67.4
FAN27G0740 Fragaria x ananassa HOM05D003313 ORTHO05D004217 9.1e-82 307.4 242 67.4
EL10Ac3g07331 Beta vulgaris HOM05D003313 ORTHO05D004217 1.2e-81 307.0 243 67.1
Ah.13g077320 Amaranthus hybridus HOM05D003313 ORTHO05D004217 2.0e-81 306.2 243 66.3
ATR0620G123 Amborella trichopoda HOM05D003313 ORTHO05D004217 3.5e-81 305.4 243 66.7
Glyma.19G223400 Glycine max HOM05D003313 ORTHO05D004217 3.5e-81 305.4 252 67.9
HanXRQChr15g0468281 Helianthus annuus HOM05D003313 ORTHO05D004217 4.5e-81 305.1 248 66.5
Thhalv10003520m.g Eutrema salsugineum HOM05D003313 ORTHO05D004217 5.9e-81 304.7 244 67.6
AL6G36310 Arabidopsis lyrata HOM05D003313 ORTHO05D004217 1.0e-80 303.9 244 68.0
AT5G24710 Arabidopsis thaliana HOM05D003313 ORTHO05D004217 1.0e-80 303.9 244 68.0
ECA240G0535 Erigeron canadensis HOM05D003313 ORTHO05D004217 1.3e-80 303.5 247 65.6
Glyma.03G226400 Glycine max HOM05D003313 ORTHO05D004217 1.3e-80 303.5 252 67.1
Gohir.D08G026400 Gossypium hirsutum HOM05D003313 ORTHO05D004217 1.7e-80 303.1 243 65.8
Gorai.004G022900 Gossypium raimondii HOM05D003313 ORTHO05D004217 1.7e-80 303.1 243 65.8
CARHR188770 Cardamine hirsuta HOM05D003313 ORTHO05D004217 3.8e-80 302.0 244 67.2
Sp2g22700 Schrenkiella parvula HOM05D003313 ORTHO05D004217 5.0e-80 301.6 244 66.8
BcaNung01252 Brassica carinata HOM05D003313 ORTHO05D004217 6.5e-80 301.2 244 66.8
A06p35540 Brassica napus HOM05D003313 ORTHO05D004217 6.5e-80 301.2 244 66.8
C07p43000 Brassica napus HOM05D003313 ORTHO05D004217 6.5e-80 301.2 244 66.8
BolC7t44829H Brassica oleracea HOM05D003313 ORTHO05D004217 6.5e-80 301.2 244 66.8
BraA06t26479Z Brassica rapa HOM05D003313 ORTHO05D004217 6.5e-80 301.2 244 66.8
BcaC04g23548 Brassica carinata HOM05D003313 ORTHO05D004217 1.5e-79 300.1 244 66.0
A09p06410 Brassica napus HOM05D003313 ORTHO05D004217 1.5e-79 300.1 244 66.0
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 1.5e-79 300.1 244 66.0
BraA09t36285Z Brassica rapa HOM05D003313 ORTHO05D004217 1.5e-79 300.1 244 66.0
VMungo1383G1216 Vigna mungo HOM05D003313 ORTHO05D004217 2.5e-79 299.3 253 66.4
Medtr7g111080 Medicago truncatula HOM05D003313 ORTHO05D004217 3.2e-79 298.9 250 65.6
C09p07140 Brassica napus HOM05D003313 ORTHO05D004217 4.2e-79 298.5 244 66.0
Phvul.001G220300 Phaseolus vulgaris HOM05D003313 ORTHO05D004217 4.2e-79 298.5 252 65.9
HPP92_021469 Vanilla planifolia HOM05D003313 ORTHO05D004217 1.6e-78 296.6 244 62.7
Carub.0006s2256 Capsella rubella HOM05D003313 ORTHO05D004217 3.0e-77 292.4 244 65.2
SEGI_06427 Sequoiadendron giganteum HOM05D003313 ORTHO05D004217 1.2e-76 290.4 244 63.1
Hund19080 Selenicereus undatus HOM05D003313 ORTHO05D004217 2.6e-76 289.3 243 63.8
Os01g0653800 Oryza sativa ssp. japonica HOM05D003313 ORTHO05D004217 8.3e-75 284.3 246 62.2
Ca_09260_v3 Cicer arietinum L. HOM05D003313 ORTHO05D004217 1.2e-73 280.4 249 61.8
Zm00001eb359400 Zea mays HOM05D003313 ORTHO05D004217 1.2e-73 280.4 249 61.4
Lalb_Chr18g0046271 Lupinus albus HOM05D003313 ORTHO05D004217 5.9e-73 278.1 246 62.2
Zm00001eb158110 Zea mays HOM05D003313 ORTHO05D004217 5.9e-73 278.1 249 61.4
Haze_14998 Corylus avellana HOM05D003313 ORTHO05D004217 4.0e-69 265.4 243 61.3
Lj5C312G5 Lonicera japonica HOM05D003313 ORTHO05D004217 1.2e-68 263.8 242 62.8
CDE09G0721 Ceratophyllum demersum HOM05D003313 ORTHO05D004217 5.7e-68 261.5 215 61.4
Gohir.A08G016300 Gossypium hirsutum HOM05D003313 ORTHO05D004217 2.2e-67 259.6 206 65.5
Pp3c1_36370 Physcomitrium patens HOM05D003313 ORTHO05D004217 6.4e-67 258.1 248 59.7
Lalb_Chr15g0077831 Lupinus albus HOM05D003313 ORTHO05D004217 2.4e-66 256.1 249 60.2
SMO116G0300 Selaginella moellendorffii HOM05D003313 ORTHO05D004217 3.5e-65 252.3 238 58.8
MD10G1148800 Malus domestica HOM05D003313 ORTHO05D004217 4.6e-65 251.9 216 63.4
BcaNung07352 Brassica carinata HOM05D003313 ORTHO05D004217 5.9e-65 251.5 210 64.3
AagrBONN_evm.TU.Sc2ySwM_228.3123 Anthoceros agrestis HOM05D003313 ORTHO05D004217 1.9e-63 246.5 262 54.6
Mapoly0031s0124 Marchantia polymorpha HOM05D003313 ORTHO05D004217 1.9e-63 246.5 251 57.4
AUR62021005 Chenopodium quinoa HOM05D003313 ORTHO05D004217 7.8e-57 224.6 244 54.5
SHI06529 Sapria himalayana HOM05D003313 ORTHO05D004217 5.0e-56 221.9 170 65.9
CBR_g3034 Chara braunii HOM05D003313 ORTHO05D004217 1.6e-54 216.9 249 52.2
AUR62018429 Chenopodium quinoa HOM05D003313 ORTHO05D004217 9.8e-52 207.6 243 50.2
Cpa.g.sc17.16 Carica papaya HOM05D003313 ORTHO05D004217 9.3e-26 121.3 87 73.6
Hund25753 Selenicereus undatus HOM05D003313 ORTHO05D004217 1.0e-24 117.9 72 76.4
EL10Ac6g13974 Beta vulgaris HOM05D000877 ORTHO05D012137 3.4e-20 102.8 87 62.1
ATR0620G069 Amborella trichopoda HOM05D003313 ORTHO05D004217 3.8e-19 99.4 120 50.8
CBR_g53818 Chara braunii HOM05D003313 ORTHO05D004217 8.4e-19 98.2 126 46.0
Cpa.g.sc17.15 Carica papaya HOM05D003313 ORTHO05D004217 1.1e-18 97.8 68 72.1
PRCOL_00001888 Prasinoderma coloniale HOM05D003313 ORTHO05D004217 1.8e-13 80.5 96 41.7
Cre12.g535350 Chlamydomonas reinhardtii HOM05D003313 ORTHO05D004217 4.2e-10 69.3 93 46.2
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 3.9e-08 62.8 58 58.6
Sed0004563 Sechium edule HOM05D003313 ORTHO05D004217 5.7e-07 58.9 61 45.9


User provided reference genes

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