Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032161 Daucus carota HOM05D037225 ORTHO05D003280 6.8e-69 264.2 171 100.0
DCAR_029784 Daucus carota HOM05D002962 ORTHO05D003280 2.6e-52 209.1 174 68.4
DCAR_032261 Daucus carota HOM05D037225 ORTHO05D003280 6.4e-51 204.5 171 76.0
DCAR_029314 Daucus carota HOM05D037225 ORTHO05D003280 2.7e-41 172.6 93 98.9
PGSC0003DMG400018228 Solanum tuberosum HOM05D002962 ORTHO05D003280 1.9e-18 96.7 174 43.1
Solyc01g102500.3 Solanum lycopersicum HOM05D002962 ORTHO05D003280 5.5e-18 95.1 174 42.5
Sopen01g044940 Solanum pennellii HOM05D002962 ORTHO05D003280 1.2e-17 94.0 174 42.0
Nitab4.5_0004090g0080 Nicotiana tabacum HOM05D002962 ORTHO05D003280 2.7e-17 92.8 183 38.8
Nitab4.5_0000399g0060 Nicotiana tabacum HOM05D002962 ORTHO05D003280 1.8e-16 90.1 182 37.9
CAN.G1379.34 Capsicum annuum HOM05D002962 ORTHO05D003280 8.7e-16 87.8 171 36.8
Lsat_1_v5_gn_9_84201 Lactuca sativa HOM05D002962 ORTHO05D003280 8.7e-16 87.8 205 36.6
ECA236G1860 Erigeron canadensis HOM05D002962 ORTHO05D003280 7.4e-15 84.7 182 42.3
Hma1.2p1_0157F.1_g069450 Hydrangea macrophylla HOM05D002962 ORTHO05D003280 3.7e-14 82.4 97 54.6
HanXRQChr07g0193731 Helianthus annuus HOM05D002962 ORTHO05D003280 1.2e-12 77.4 180 37.8
Rhsim11G0111400 Rhododendron simsii HOM05D002962 ORTHO05D003280 1.2e-12 77.4 202 34.7
Oeu061916.1 Olea europaea HOM05D002962 ORTHO05D003280 1.3e-11 73.9 192 35.4
Peaxi162Scf00194g00630 Petunia axillaris HOM05D002962 ORTHO05D003280 1.9e-10 70.1 89 51.7
CSS0004345 Camellia sinensis var. sinensis HOM05D002962 ORTHO05D003280 5.5e-10 68.6 201 30.8
CSS0032232 Camellia sinensis var. sinensis HOM05D002962 ORTHO05D003280 7.1e-10 68.2 100 43.0
SalBow4G1932 Salvia bowleyana HOM05D002962 ORTHO05D003280 9.3e-10 67.8 90 51.1
CSS0019880 Camellia sinensis var. sinensis HOM05D002962 ORTHO05D003280 1.2e-09 67.4 200 30.5
SalBow4G2363 Salvia bowleyana HOM05D002962 ORTHO05D003280 1.2e-09 67.4 93 48.4
Cc02_g36860 Coffea canephora HOM05D002962 ORTHO05D003280 1.6e-09 67.0 99 43.4
Lsat_1_v5_gn_2_77380 Lactuca sativa HOM05D002962 ORTHO05D003280 4.6e-09 65.5 97 45.4
CDE02G1522 Ceratophyllum demersum HOM05D002962 ORTHO05D003280 1.3e-08 63.9 87 50.6
SGA_v2.0_scaffold311G48235 Striga asiatica HOM05D002962 ORTHO05D003280 2.5e-07 59.7 179 32.4
SGA_v2.0_scaffold658G53389 Striga asiatica HOM05D002962 ORTHO05D003280 2.5e-07 59.7 158 33.5
TAR362G0986 Trochodendron aralioides HOM05D002962 ORTHO05D003280 3.3e-07 59.3 87 41.4
Migut.N00996 Erythranthe guttata HOM05D002962 ORTHO05D003280 2.2e-06 56.6 90 44.4
MBI18_g28939_MAGBIO Magnolia biondii HOM05D002962 ORTHO05D003280 2.8e-06 56.2 88 48.9
Actinidia17723 Actinidia chinensis HOM05D002962 ORTHO05D003280 4.8e-06 55.5 91 40.7
CDE08G1531 Ceratophyllum demersum HOM05D002962 ORTHO05D003280 6.3e-06 55.1 85 45.9
vmacro01646 Vaccinium macrocarpon HOM05D002962 ORTHO05D003280 8.2e-06 54.7 194 28.4


User provided reference genes

Program Settings