Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032148 Daucus carota HOM05D004979 ORTHO05D006190 5.2e-116 421.0 203 100.0
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 4.8e-106 387.9 196 93.9
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 2.8e-53 212.6 325 40.0
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.1e-52 210.7 336 38.7
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.5e-51 206.8 269 43.1
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 7.6e-51 204.5 336 36.6
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 1.7e-50 203.4 336 36.3
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 6.4e-50 201.4 352 36.6
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 8.4e-50 201.1 336 38.1
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 8.4e-50 201.1 336 38.1
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 2.4e-49 199.5 336 37.2
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 7.1e-49 198.0 319 38.2
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 3.9e-47 192.2 336 36.0
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 3.9e-47 192.2 320 36.2
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 3.9e-47 192.2 336 35.1
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 5.1e-47 191.8 336 35.1
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 1.5e-46 190.3 336 34.5
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 7.3e-46 188.0 327 36.4
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 3.6e-45 185.7 337 33.2
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 3.6e-45 185.7 336 36.6
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 6.2e-45 184.9 336 34.8
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 1.8e-44 183.3 338 35.8
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 2.4e-44 183.0 336 33.9
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 3.1e-44 182.6 320 35.9
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 3.1e-44 182.6 337 34.4
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 4.0e-44 182.2 336 33.3
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 4.0e-44 182.2 337 34.1
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.0e-44 182.2 333 34.2
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 5.3e-44 181.8 337 33.2
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 5.3e-44 181.8 337 34.7
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 9.0e-44 181.0 337 32.9
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 1.2e-43 180.6 331 36.0
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 1.2e-43 180.6 337 33.8
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 1.5e-43 180.3 337 33.8
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 2.6e-43 179.5 337 34.7
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 4.5e-43 178.7 337 33.5
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 7.6e-43 177.9 337 35.0
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 9.9e-43 177.6 339 34.2
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 1.3e-42 177.2 338 33.1
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 2.2e-42 176.4 331 34.7
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 2.9e-42 176.0 332 34.0
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 2.9e-42 176.0 339 34.2
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 2.9e-42 176.0 337 32.3
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 2.9e-42 176.0 337 34.1
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 2.9e-42 176.0 337 32.6
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 3.8e-42 175.6 338 32.8
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.8e-42 175.6 355 33.0
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 4.9e-42 175.3 338 32.8
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 4.9e-42 175.3 338 32.8
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 4.9e-42 175.3 338 32.8
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 4.9e-42 175.3 335 34.0
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 4.9e-42 175.3 334 33.8
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 6.4e-42 174.9 341 33.1
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 8.4e-42 174.5 338 32.8
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 8.4e-42 174.5 317 33.8
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 8.4e-42 174.5 337 34.1
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 1.1e-41 174.1 332 34.3
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 1.1e-41 174.1 337 34.1
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 4.2e-41 172.2 316 34.2
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 4.2e-41 172.2 332 33.4
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 4.2e-41 172.2 324 35.8
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 9.3e-41 171.0 360 33.6
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 1.2e-40 170.6 337 32.9
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 1.2e-40 170.6 337 33.8
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 1.6e-40 170.2 364 32.1
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 2.7e-40 169.5 336 33.3
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 3.5e-40 169.1 336 32.7
GSVIVG01007430001 Vitis vinifera HOM05D004979 ORTHO05D006190 4.6e-40 168.7 155 55.5
GSVIVG01007210001 Vitis vinifera HOM05D004979 ORTHO05D006190 6.0e-40 168.3 155 53.5
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 2.3e-39 166.4 336 31.8
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 2.3e-39 166.4 337 32.6
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 3.9e-39 165.6 332 32.8
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 5.1e-39 165.2 338 32.2
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 6.7e-39 164.9 338 31.4
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 6.7e-39 164.9 338 31.4
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 1.5e-38 163.7 333 32.7
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 2.5e-38 162.9 336 31.0
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 2.5e-38 162.9 332 32.2
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 2.8e-37 159.5 339 33.0
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 3.7e-37 159.1 352 31.0
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 6.2e-37 158.3 377 29.7
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 8.1e-37 157.9 366 31.4
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 8.1e-37 157.9 336 31.5
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 8.1e-37 157.9 337 31.8
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 4.0e-36 155.6 337 32.3
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 4.0e-36 155.6 336 30.1
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 5.3e-36 155.2 329 32.5
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 5.3e-36 155.2 334 31.1
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 5.3e-36 155.2 337 32.0
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.4e-35 152.5 129 59.7
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 1.7e-34 150.2 342 28.9
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.9e-34 148.7 129 58.1
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 8.4e-34 147.9 307 33.2
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 1.1e-33 147.5 288 32.6
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 1.9e-33 146.7 307 31.9
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.0e-31 141.0 487 26.1
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 1.8e-31 140.2 131 54.2
ClCG03G002030 Citrullus lanatus HOM05D004979 ORTHO05D006190 3.9e-31 139.0 109 60.6
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 8.2e-29 131.3 343 27.1
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 1.4e-28 130.6 136 50.7
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 9.0e-28 127.9 292 31.2
Cpa.g.sc46.2 Carica papaya HOM05D004979 ORTHO05D006190 1.6e-24 117.1 109 55.0
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 1.3e-23 114.0 143 45.5
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 2.3e-23 113.2 349 26.6
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 5.1e-23 112.1 110 52.7
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 6.7e-23 111.7 99 57.6
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.5e-22 110.5 88 62.5
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 9.7e-22 107.8 99 54.5
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 1.1e-20 104.4 331 28.1
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.4e-20 104.0 99 53.5
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 1.8e-20 103.6 97 53.6
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 3.1e-20 102.8 95 54.7
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 9.0e-20 101.3 99 52.5
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.2e-19 100.9 70 62.9
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 2.6e-19 99.8 99 52.5
Lsat_1_v5_gn_8_74741 Lactuca sativa HOM05D004979 ORTHO05D006190 6.5e-18 95.1 81 56.8
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 1.9e-17 93.6 88 52.3
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 3.2e-17 92.8 98 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 6.1e-16 88.6 74 52.7
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 3.3e-14 82.8 87 51.7
GSVIVG01004371001 Vitis vinifera HOM05D004979 ORTHO05D006190 2.8e-13 79.7 94 48.9
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 6.9e-12 75.1 165 32.1
SHI20227 Sapria himalayana HOM05D004979 ORTHO05D006190 2.2e-10 70.1 50 60.0
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 1.9e-09 67.0 47 63.8
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 1.9e-09 67.0 47 63.8
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 1.9e-09 67.0 48 62.5
Medtr3g085120 Medicago truncatula HOM05D002545 ORTHO05D002335 2.5e-09 66.6 104 35.6
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 7.2e-09 65.1 47 61.7


User provided reference genes

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