Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032038 Daucus carota HOM05D003783 ORTHO05D004568 1.4e-66 256.1 129 100.0
DCAR_031805 Daucus carota HOM05D003783 ORTHO05D004568 8.5e-64 246.9 122 100.0
DCAR_032429 Daucus carota HOM05D003783 ORTHO05D004568 8.5e-64 246.9 122 100.0
MD14G1092300 Malus domestica HOM05D003783 ORTHO05D004568 6.1e-62 240.7 122 96.7
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 1.0e-61 240.0 122 96.7
Dinv06713 Davidia involucrata HOM05D003783 ORTHO05D004568 2.3e-61 238.8 122 96.7
Gorai.013G137500 Gossypium raimondii HOM05D003783 ORTHO05D004568 2.3e-61 238.8 122 95.9
HanXRQChr04g0109071 Helianthus annuus HOM05D003783 ORTHO05D004568 2.3e-61 238.8 122 96.7
HanXRQChr08g0236011 Helianthus annuus HOM05D003783 ORTHO05D004568 2.3e-61 238.8 122 96.7
HanXRQChr14g0434351 Helianthus annuus HOM05D003783 ORTHO05D004568 2.3e-61 238.8 122 96.7
HanXRQMTg0579571 Helianthus annuus HOM05D003783 ORTHO05D004568 2.3e-61 238.8 122 96.7
Lsat_1_v5_gn_5_16100 Lactuca sativa HOM05D003783 ORTHO05D004568 3.9e-61 238.0 121 97.5
LjContig00315g0021149 Lotus japonicus HOM05D003783 ORTHO05D004568 8.8e-61 236.9 123 96.7
LjContig00439g0010231 Lotus japonicus HOM05D003783 ORTHO05D004568 8.8e-61 236.9 123 96.7
Sc11g0004390 Simmondsia chinensis HOM05D003783 ORTHO05D004568 1.1e-60 236.5 122 96.7
CANSAT16G0001 Cannabis sativa HOM05D003783 ORTHO05D004568 1.5e-60 236.1 122 95.9
Lalb_Chr00c29g0408271 Lupinus albus HOM05D003783 ORTHO05D004568 2.0e-60 235.7 123 95.9
arahy.Tifrunner.gnm1.ann1.WX3135 Arachis hypogaea HOM05D003783 ORTHO05D004568 2.6e-60 235.3 123 95.9
SabraMtG0000900 Salix brachista HOM05D003783 ORTHO05D004568 4.4e-60 234.6 122 95.1
RcHm_v2.0_Chr6g0258021 Rosa chinensis HOM05D003783 ORTHO05D004568 7.4e-60 233.8 121 95.9
RcHm_v2.0_MTg0498851 Rosa chinensis HOM05D003783 ORTHO05D004568 7.4e-60 233.8 121 95.9
HanXRQChr01g0003471 Helianthus annuus HOM05D003783 ORTHO05D004568 9.7e-60 233.4 122 94.3
AUR62042333 Chenopodium quinoa HOM05D003783 ORTHO05D004568 1.3e-59 233.0 122 95.1
Ah.10g028070 Amaranthus hybridus HOM05D003783 ORTHO05D004568 1.7e-59 232.6 122 95.1
Medtr0212s0020 Medicago truncatula HOM05D003783 ORTHO05D004568 2.2e-59 232.3 123 95.1
Peaxi162Scf00707g00004 Petunia axillaris HOM05D003783 ORTHO05D004568 2.2e-59 232.3 122 96.7
Peaxi162Scf02040g00001 Petunia axillaris HOM05D003783 ORTHO05D004568 2.2e-59 232.3 122 96.7
PGSC0003DMG400016897 Solanum tuberosum HOM05D003783 ORTHO05D004568 2.2e-59 232.3 122 96.7
Ah.01g011790 Amaranthus hybridus HOM05D003783 ORTHO05D004568 4.8e-59 231.1 122 94.3
BcaC09g49594 Brassica carinata HOM05D003783 ORTHO05D004568 4.8e-59 231.1 122 95.1
BNapus_Darmor_BZH_scaffold_234p00030 Brassica napus HOM05D003783 ORTHO05D004568 4.8e-59 231.1 122 95.1
BraSC177t45753Z Brassica rapa HOM05D003783 ORTHO05D004568 4.8e-59 231.1 122 95.1
BraSC77t46622Z Brassica rapa HOM05D003783 ORTHO05D004568 4.8e-59 231.1 122 95.1
Psat4g179160 Pisum sativum HOM05D003783 ORTHO05D004568 6.3e-59 230.7 123 94.3
Solyc00g049210.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 6.3e-59 230.7 122 95.9
Solyc00g500249.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 6.3e-59 230.7 122 95.9
Solyc00g500348.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 6.3e-59 230.7 122 95.9
HanXRQChr09g0246391 Helianthus annuus HOM05D003783 ORTHO05D004568 8.2e-59 230.3 122 93.4
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 1.1e-58 229.9 122 94.3
Zm00001eb434740 Zea mays HOM05D003783 ORTHO05D004568 1.1e-58 229.9 122 94.3
Zm00001eb436360 Zea mays HOM05D003783 ORTHO05D004568 1.1e-58 229.9 122 94.3
Zm00001eb437010 Zea mays HOM05D003783 ORTHO05D004568 1.1e-58 229.9 122 94.3
Zm00001eb438050 Zea mays HOM05D003783 ORTHO05D004568 1.1e-58 229.9 122 94.3
Zm00001eb438170 Zea mays HOM05D003783 ORTHO05D004568 1.1e-58 229.9 122 94.3
Zm00001eb438820 Zea mays HOM05D003783 ORTHO05D004568 1.1e-58 229.9 122 94.3
CsaV3_UNG210090 Cucumis sativus L. HOM05D003783 ORTHO05D004568 1.4e-58 229.6 122 91.8
Nn1g09973 Nelumbo nucifera HOM05D003783 ORTHO05D004568 1.8e-58 229.2 122 94.3
Nn1g10045 Nelumbo nucifera HOM05D003783 ORTHO05D004568 1.8e-58 229.2 122 94.3
Nn1g10116 Nelumbo nucifera HOM05D003783 ORTHO05D004568 1.8e-58 229.2 122 94.3
Sp3g25620 Schrenkiella parvula HOM05D003783 ORTHO05D004568 2.4e-58 228.8 122 94.3
Aa31csc549G20 Aethionema arabicum HOM05D003783 ORTHO05D004568 4.1e-58 228.0 122 94.3
Aqoxy163s002 Aquilegia oxysepala HOM05D003783 ORTHO05D004568 4.1e-58 228.0 122 93.4
SalBow1G3009 Salvia bowleyana HOM05D003783 ORTHO05D004568 6.9e-58 227.3 121 95.0
SGA_v2.0_scaffold245G44749 Striga asiatica HOM05D003783 ORTHO05D004568 6.9e-58 227.3 121 93.4
CAN.G497.18 Capsicum annuum HOM05D003783 ORTHO05D004568 9.1e-58 226.9 122 95.1
Nn3g20873 Nelumbo nucifera HOM05D003783 ORTHO05D004568 1.5e-57 226.1 122 92.6
RhsimMtG0005400 Rhododendron simsii HOM05D003783 ORTHO05D004568 3.4e-57 224.9 122 93.4
SHI54253 Sapria himalayana HOM05D003783 ORTHO05D004568 4.5e-57 224.6 121 90.9
MBI05_g05347_MAGBIO Magnolia biondii HOM05D003783 ORTHO05D004568 7.7e-57 223.8 125 92.0
AL3G44640 Arabidopsis lyrata HOM05D003783 ORTHO05D004568 1.0e-56 223.4 118 94.9
ATMG00830 Arabidopsis thaliana HOM05D003783 ORTHO05D004568 1.0e-56 223.4 118 94.9
BcaC09g49580 Brassica carinata HOM05D003783 ORTHO05D004568 2.2e-56 222.2 122 93.4
Lsat_1_v5_gn_7_99780 Lactuca sativa HOM05D003783 ORTHO05D004568 2.2e-56 222.2 121 90.9
CARHR283110 Cardamine hirsuta HOM05D003783 ORTHO05D004568 2.9e-56 221.9 118 94.1
Sopen05g012690 Solanum pennellii HOM05D003783 ORTHO05D004568 3.8e-56 221.5 122 92.6
SHI54470 Sapria himalayana HOM05D003783 ORTHO05D004568 1.6e-54 216.1 121 89.3
Nitab4.5_0004300g0270 Nicotiana tabacum HOM05D003783 ORTHO05D004568 4.7e-54 214.5 122 90.2
CDE02G3531 Ceratophyllum demersum HOM05D003783 ORTHO05D004568 1.4e-53 213.0 121 89.3
MBI19_g47479_MAGBIO Magnolia biondii HOM05D003783 ORTHO05D004568 6.3e-51 204.1 116 89.7
Ah.00g237920 Amaranthus hybridus HOM05D003783 ORTHO05D004568 1.4e-50 203.0 105 94.3
Sc22g0004100 Simmondsia chinensis HOM05D003783 ORTHO05D004568 1.4e-50 203.0 114 87.7
Thhalv10029166m.g Eutrema salsugineum HOM05D003783 ORTHO05D004568 5.3e-50 201.1 122 86.1
SHI36895 Sapria himalayana HOM05D003783 ORTHO05D004568 9.4e-47 190.3 121 82.6
SHI54813 Sapria himalayana HOM05D003783 ORTHO05D004568 1.6e-46 189.5 106 90.6
Eucgr.C03075 Eucalyptus grandis HOM05D003783 ORTHO05D004568 6.1e-46 187.6 115 84.3
Psat7g150720 Pisum sativum HOM05D003783 ORTHO05D004568 1.4e-45 186.4 107 89.7
Nitab4.5_0000592g0140 Nicotiana tabacum HOM05D003783 ORTHO05D004568 6.3e-43 177.6 122 77.9
TPR.G885 Trifolium pratense HOM05D003783 ORTHO05D004568 2.4e-42 175.6 96 93.8
GSVIVG01006218001 Vitis vinifera HOM05D003783 ORTHO05D004568 7.7e-41 170.6 89 94.4
GSVIVG01004964001 Vitis vinifera HOM05D003783 ORTHO05D004568 6.5e-40 167.5 89 93.3
Nitab4.5_0010936g0010 Nicotiana tabacum HOM05D003783 ORTHO05D004568 2.5e-39 165.6 122 74.6
CAN.G1576.3 Capsicum annuum HOM05D003783 ORTHO05D004568 4.2e-39 164.9 100 83.0
Nitab4.5_0002888g0030 Nicotiana tabacum HOM05D003783 ORTHO05D004568 4.2e-39 164.9 94 91.5
CARHR287240 Cardamine hirsuta HOM05D003783 ORTHO05D004568 2.3e-37 159.1 99 83.8
Nitab4.5_0000172g1380 Nicotiana tabacum HOM05D003783 ORTHO05D004568 2.3e-37 159.1 107 79.4
SEGI_30299 Sequoiadendron giganteum HOM05D003783 ORTHO05D004568 1.3e-32 143.3 119 67.2
Solyc11g063620.2 Solanum lycopersicum HOM05D003783 ORTHO05D004568 2.5e-31 139.0 85 88.2
Nitab4.5_0000128g0160 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.8e-29 132.9 122 60.7
CAN.G124.8 Capsicum annuum HOM05D003783 ORTHO05D004568 5.2e-29 131.3 93 76.3
CAN.G1001.41 Capsicum annuum HOM05D003783 ORTHO05D004568 6.8e-29 131.0 68 94.1
CDE02G1256 Ceratophyllum demersum HOM05D003783 ORTHO05D004568 1.2e-28 130.2 65 93.8
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 2.6e-28 129.0 60 100.0
Nitab4.5_0008535g0060 Nicotiana tabacum HOM05D003783 ORTHO05D004568 5.7e-28 127.9 69 88.4
BraSC48t46252Z Brassica rapa HOM05D003783 ORTHO05D004568 1.1e-26 123.6 77 81.8
Nitab4.5_0011099g0010 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.7e-24 116.3 62 91.9
Psat6g195120 Pisum sativum HOM05D003783 ORTHO05D004568 2.1e-22 109.4 80 78.8
Solyc02g050290.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 6.1e-22 107.8 74 77.0
AUR62033936 Chenopodium quinoa HOM05D003783 ORTHO05D004568 3.4e-20 102.1 58 84.5
Ah.01g011720 Amaranthus hybridus HOM05D003783 ORTHO05D013694 4.4e-20 101.7 97 56.7
SHI32491 Sapria himalayana HOM05D003783 ORTHO05D004568 8.3e-19 97.4 65 72.3
arahy.Tifrunner.gnm1.ann1.BUQ0M3 Arachis hypogaea HOM05D003783 ORTHO05D004568 1.2e-17 93.6 57 87.7
C05p22550 Brassica napus HOM05D003783 ORTHO05D004568 2.0e-17 92.8 60 80.0
BolC5t30954H Brassica oleracea HOM05D003783 ORTHO05D004568 1.5e-15 86.7 60 76.7
Nitab4.5_0005837g0060 Nicotiana tabacum HOM05D000102 ORTHO05D000138 2.1e-14 82.8 48 83.3
SHI11506 Sapria himalayana HOM05D003783 ORTHO05D004568 2.9e-11 72.4 47 74.5
Solyc12g035910.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 3.7e-11 72.0 49 73.5
Actinidia31963 Actinidia chinensis HOM05D000944 ORTHO05D003581 1.1e-10 70.5 53 66.0
SHI26671 Sapria himalayana HOM05D003783 ORTHO05D004568 1.7e-08 63.2 38 73.7
SEGI_06792 Sequoiadendron giganteum HOM05D003783 ORTHO05D004568 3.9e-08 62.0 38 73.7
CAN.G60.11 Capsicum annuum HOM05D001322 ORTHO05D001301 1.1e-07 60.5 35 85.7
Solyc04g049870.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 4.3e-07 58.5 40 72.5
Peaxi162Scf00122g00087 Petunia axillaris HOM05D000216 ORTHO05D000634 2.1e-06 56.2 28 92.9
BolSC28t60416H Brassica oleracea HOM05D003783 ORTHO05D004568 3.6e-06 55.5 53 56.6


User provided reference genes

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