Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 0.0e+00 1191.0 619 100.0
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.4e-294 1015.8 572 93.7
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 4.8e-96 356.3 672 39.3
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 2.6e-57 227.6 612 33.3
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.8e-56 224.2 625 33.1
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 4.1e-55 220.3 609 33.3
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 2.0e-54 218.0 704 31.2
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 7.7e-54 216.1 637 30.5
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.3e-53 215.3 642 32.2
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 5.0e-53 213.4 631 31.7
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.0e-53 213.4 642 32.7
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.9e-52 211.5 688 30.2
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 7.2e-52 209.5 645 31.6
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.6e-51 208.4 760 28.6
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 6.1e-51 206.5 635 31.2
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 6.1e-51 206.5 752 30.3
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 5.2e-50 203.4 614 32.2
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 8.8e-50 202.6 597 30.7
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 8.8e-50 202.6 683 29.6
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.1e-49 202.2 689 31.6
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.5e-49 201.8 643 32.3
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 3.3e-49 200.7 571 32.9
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 6.3e-48 196.4 704 29.0
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 2.4e-47 194.5 636 31.1
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 4.1e-47 193.7 447 35.6
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.1e-47 193.7 658 28.6
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 7.0e-47 193.0 653 28.2
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.0e-46 191.4 608 30.8
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 3.8e-45 187.2 619 30.0
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.5e-44 185.3 613 31.8
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.5e-44 185.3 658 30.5
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.9e-44 184.9 358 38.5
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 1.0e-42 179.1 613 29.7
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.4e-42 178.7 642 29.8
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.3e-42 177.9 636 28.6
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 3.0e-42 177.6 574 31.5
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.2e-41 175.6 653 29.2
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.2e-41 175.6 633 29.4
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 5.7e-41 173.3 633 28.3
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.3e-40 172.2 633 29.1
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 2.8e-40 171.0 623 29.9
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 6.3e-40 169.9 623 28.9
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 3.1e-39 167.5 333 36.3
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 9.1e-39 166.0 797 26.3
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.2e-38 165.6 504 31.2
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 4.5e-38 163.7 675 27.3
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.7e-37 161.8 124 66.1
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.2e-37 161.4 632 29.6
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 8.5e-37 159.5 316 38.3
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 2.5e-36 157.9 658 28.3
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.5e-36 156.8 658 28.3
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 9.4e-36 156.0 635 27.9
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 1.6e-35 155.2 248 39.1
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.6e-35 155.2 150 56.7
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.1e-35 154.8 150 56.7
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 6.1e-35 153.3 411 30.7
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 6.1e-35 153.3 157 55.4
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 8.0e-35 152.9 660 28.2
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 1.4e-34 152.1 819 24.8
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.0e-34 150.6 635 28.0
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 2.6e-33 147.9 169 52.7
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 4.4e-33 147.1 819 24.7
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.3e-32 145.6 353 36.3
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.7e-32 145.2 241 39.4
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 3.1e-31 141.0 162 47.5
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 3.1e-31 141.0 282 36.9
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 4.1e-31 140.6 349 35.0
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 4.1e-31 140.6 130 56.2
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.2e-30 139.0 131 57.3
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.3e-29 135.6 352 35.8
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 1.7e-29 135.2 338 36.4
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 5.0e-29 133.7 622 26.5
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 8.6e-29 132.9 568 27.8
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 4.2e-28 130.6 368 31.2
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 4.0e-26 124.0 444 27.5
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 1.5e-25 122.1 653 26.5
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 4.4e-25 120.6 323 30.3
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 5.7e-25 120.2 620 26.6
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 9.8e-25 119.4 323 30.3
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 2.8e-24 117.9 411 28.0
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 1.1e-23 115.9 329 31.0
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 4.1e-23 114.0 160 41.2
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 5.4e-23 113.6 328 30.5
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 9.2e-23 112.8 332 29.8
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 9.2e-23 112.8 303 32.3
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 1.6e-22 112.1 327 29.1
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.6e-22 112.1 329 29.8
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 3.5e-22 110.9 260 33.8
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 4.5e-22 110.5 545 26.2
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 7.8e-22 109.8 395 30.4
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 3.8e-21 107.5 348 29.3
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 6.6e-21 106.7 185 39.5
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.1e-20 105.9 216 39.4
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.5e-17 95.5 538 26.6
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 2.0e-17 95.1 248 33.9
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.7e-16 92.0 164 33.5
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.7e-16 92.0 163 35.0
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.7e-16 92.0 163 35.0
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 6.4e-16 90.1 157 37.6
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 6.4e-16 90.1 66 62.1
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 1.9e-15 88.6 137 39.4
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 4.1e-15 87.4 412 27.9
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 5.4e-15 87.0 460 27.2
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 1.6e-14 85.5 182 31.9
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 2.7e-14 84.7 128 38.3
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 6.0e-14 83.6 720 22.4
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 3.0e-13 81.3 112 41.1
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 3.0e-13 81.3 194 33.5
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.6e-11 75.5 631 23.9
Lj4A308T27 Lonicera japonica HOM05D006771 ORTHO05D008296 5.2e-10 70.5 77 46.8
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 1.6e-06 58.9 123 32.5


User provided reference genes

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