Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031863 Daucus carota HOM05D002872 ORTHO05D003204 6.5e-75 284.3 174 100.0
Dinv44110 Davidia involucrata HOM05D002872 ORTHO05D003204 2.3e-32 142.9 167 43.7
Peaxi162Scf00377g00042 Petunia axillaris HOM05D002872 ORTHO05D003204 7.5e-31 137.9 132 52.3
Prupe.2G135800 Prunus persica HOM05D002872 ORTHO05D003204 1.1e-29 134.0 138 49.3
Lj7C539G2 Lonicera japonica HOM05D002872 ORTHO05D003204 1.8e-29 133.3 193 42.0
PGSC0003DMG400025977 Solanum tuberosum HOM05D002872 ORTHO05D003204 1.8e-29 133.3 129 50.4
Nitab4.5_0000706g0100 Nicotiana tabacum HOM05D002872 ORTHO05D003204 2.4e-29 132.9 118 55.1
Solyc01g090770.4 Solanum lycopersicum HOM05D002872 ORTHO05D003204 2.4e-29 132.9 129 49.6
CSS0005850 Camellia sinensis var. sinensis HOM05D002872 ORTHO05D003204 3.1e-29 132.5 123 52.8
QL04p035844 Quercus lobata HOM05D002872 ORTHO05D003204 4.1e-29 132.1 141 46.1
Sopen01g036500 Solanum pennellii HOM05D002872 ORTHO05D003204 7.0e-29 131.3 129 50.4
Rhsim01G0135700 Rhododendron simsii HOM05D002872 ORTHO05D003204 9.1e-29 131.0 140 47.1
Hma1.2p1_0341F.1_g130280 Hydrangea macrophylla HOM05D002872 ORTHO05D003204 1.6e-28 130.2 172 41.9
Oeu009620.1 Olea europaea HOM05D002872 ORTHO05D003204 1.6e-28 130.2 135 51.1
Nn6g33937 Nelumbo nucifera HOM05D002872 ORTHO05D003204 3.5e-28 129.0 158 41.8
CANSAT21G2210 Cannabis sativa HOM05D002872 ORTHO05D003204 4.5e-28 128.6 152 42.8
TAR375G1003 Trochodendron aralioides HOM05D002872 ORTHO05D003204 5.9e-28 128.3 144 44.4
vmacro21040 Vaccinium macrocarpon HOM05D002872 ORTHO05D003204 1.0e-27 127.5 142 45.8
RcHm_v2.0_Chr1g0348701 Rosa chinensis HOM05D002872 ORTHO05D003204 1.3e-27 127.1 166 42.8
TWI59G0864 Tripterygium wilfordii HOM05D002872 ORTHO05D003204 1.3e-27 127.1 121 51.2
MD07G1087600 Malus domestica HOM05D002872 ORTHO05D003204 2.3e-27 126.3 140 45.7
HanXRQChr06g0168971 Helianthus annuus HOM05D002872 ORTHO05D003204 3.8e-27 125.6 112 51.8
Aqoxy7G00779 Aquilegia oxysepala HOM05D002872 ORTHO05D003204 5.0e-27 125.2 144 44.4
Lsat_1_v5_gn_7_10260 Lactuca sativa HOM05D002872 ORTHO05D003204 6.5e-27 124.8 114 49.1
Sc26g0001340 Simmondsia chinensis HOM05D002872 ORTHO05D003204 6.5e-27 124.8 168 41.7
Actinidia33487 Actinidia chinensis HOM05D002872 ORTHO05D003204 8.6e-27 124.4 161 41.0
COL.COLO4_12468 Corchorus olitorius HOM05D002872 ORTHO05D003204 1.1e-26 124.0 150 41.3
SalBow5G0529 Salvia bowleyana HOM05D002872 ORTHO05D003204 1.1e-26 124.0 166 42.2
Aa31LG1G26640 Aethionema arabicum HOM05D002872 ORTHO05D003204 1.9e-26 123.2 162 39.5
FvH4_7g10760 Fragaria vesca HOM05D002872 ORTHO05D003204 1.9e-26 123.2 113 53.1
FAN06G1805 Fragaria x ananassa HOM05D002872 ORTHO05D003204 1.9e-26 123.2 113 53.1
Cc02_g24600 Coffea canephora HOM05D002872 ORTHO05D003204 2.5e-26 122.9 112 52.7
ECA247G1848 Erigeron canadensis HOM05D002872 ORTHO05D003204 2.5e-26 122.9 112 50.0
FAN06G3468 Fragaria x ananassa HOM05D002872 ORTHO05D003204 3.3e-26 122.5 113 53.1
Lalb_Chr03g0039911 Lupinus albus HOM05D002872 ORTHO05D003204 3.3e-26 122.5 139 43.9
Lj1g0022495 Lotus japonicus HOM05D002872 ORTHO05D003204 4.2e-26 122.1 113 53.1
Phvul.008G156600 Phaseolus vulgaris HOM05D002872 ORTHO05D003204 4.2e-26 122.1 129 49.6
TPR.G39127 Trifolium pratense HOM05D002872 ORTHO05D003204 4.2e-26 122.1 113 51.3
Sabra02G0111400 Salix brachista HOM05D002872 ORTHO05D003204 5.5e-26 121.7 122 50.0
CiPaw.13G031200 Carya illinoinensis HOM05D002872 ORTHO05D003204 7.2e-26 121.3 177 40.1
Ciclev10021755m.g Citrus clementina HOM05D002872 ORTHO05D003204 7.2e-26 121.3 168 40.5
Gohir.D07G153500 Gossypium hirsutum HOM05D002872 ORTHO05D003204 7.2e-26 121.3 140 43.6
Medtr7g445370 Medicago truncatula HOM05D002872 ORTHO05D003204 7.2e-26 121.3 113 53.1
GSVIVG01018179001 Vitis vinifera HOM05D002872 ORTHO05D003204 7.2e-26 121.3 168 42.3
Atru.chr5.218 Acer truncatum HOM05D002872 ORTHO05D003204 9.5e-26 120.9 157 40.8
arahy.Tifrunner.gnm1.ann1.FMK0QZ Arachis hypogaea HOM05D002872 ORTHO05D003204 9.5e-26 120.9 128 48.4
Duzib133G1334 Durio zibethinus HOM05D002872 ORTHO05D003204 9.5e-26 120.9 150 39.3
Gohir.A07G147400 Gossypium hirsutum HOM05D002872 ORTHO05D003204 1.2e-25 120.6 140 43.6
Lalb_Chr19g0127461 Lupinus albus HOM05D002872 ORTHO05D003204 1.2e-25 120.6 122 47.5
Manes.01G270200 Manihot esculenta HOM05D002872 ORTHO05D003204 1.2e-25 120.6 173 39.9
Hund27385 Selenicereus undatus HOM05D002872 ORTHO05D003204 1.6e-25 120.2 137 43.8
Ca_07812_v3 Cicer arietinum L. HOM05D002872 ORTHO05D003204 2.8e-25 119.4 113 52.2
FAN03G2579 Fragaria x ananassa HOM05D002872 ORTHO05D003204 2.8e-25 119.4 113 52.2
MSTRG.4917 Avicennia marina HOM05D002872 ORTHO05D003204 3.6e-25 119.0 140 45.0
Eucgr.D02501 Eucalyptus grandis HOM05D002872 ORTHO05D003204 3.6e-25 119.0 160 41.2
Potri.002G142900 Populus trichocarpa HOM05D002872 ORTHO05D003204 3.6e-25 119.0 150 43.3
Psat3g155600 Pisum sativum HOM05D002872 ORTHO05D003204 8.0e-25 117.9 142 45.8
Glyma.11G165710 Glycine max HOM05D002872 ORTHO05D003204 1.0e-24 117.5 152 42.1
THA.LOC104802474 Tarenaya hassleriana HOM05D002872 ORTHO05D003204 1.0e-24 117.5 162 39.5
Thecc.01G385700 Theobroma cacao HOM05D002872 ORTHO05D003204 1.0e-24 117.5 123 42.3
ATR0317G006 Amborella trichopoda HOM05D002872 ORTHO05D003204 2.3e-24 116.3 117 51.3
FAN01G1014 Fragaria x ananassa HOM05D002872 ORTHO05D003204 4.0e-24 115.5 142 45.1
FAN10G1785 Fragaria x ananassa HOM05D002872 ORTHO05D003204 4.0e-24 115.5 142 45.1
PGR004G0587 Punica granatum HOM05D002872 ORTHO05D003204 6.8e-24 114.8 157 39.5
FAN10G3048 Fragaria x ananassa HOM05D002872 ORTHO05D003204 1.2e-23 114.0 142 45.1
AUR62013710 Chenopodium quinoa HOM05D002872 ORTHO05D003204 1.5e-23 113.6 112 49.1
Sabra14G0042900 Salix brachista HOM05D002872 ORTHO05D003204 2.0e-23 113.2 134 43.3
AUR62004149 Chenopodium quinoa HOM05D002872 ORTHO05D003204 2.6e-23 112.8 120 46.7
CsaV3_6G009100 Cucumis sativus L. HOM05D002872 ORTHO05D003204 3.4e-23 112.5 140 40.7
A04p33620 Brassica napus HOM05D002872 ORTHO05D003204 5.7e-23 111.7 162 36.4
BraA04t18825Z Brassica rapa HOM05D002872 ORTHO05D003204 5.7e-23 111.7 162 36.4
Gorai.001G175600 Gossypium raimondii HOM05D002872 ORTHO05D003204 5.7e-23 111.7 142 41.5
Sp4g27120 Schrenkiella parvula HOM05D002872 ORTHO05D003204 5.7e-23 111.7 155 38.1
BcaC02g07131 Brassica carinata HOM05D002872 ORTHO05D003204 7.5e-23 111.3 162 36.4
BcaC01g05164 Brassica carinata HOM05D002872 ORTHO05D003204 9.8e-23 110.9 157 36.9
BolC3t15327H Brassica oleracea HOM05D002872 ORTHO05D003204 9.8e-23 110.9 157 36.9
EL10Ac1g00819 Beta vulgaris HOM05D002872 ORTHO05D003204 1.3e-22 110.5 176 36.9
MELO3C022232.2 Cucumis melo HOM05D002872 ORTHO05D003204 1.3e-22 110.5 140 40.7
BcaB01g03298 Brassica carinata HOM05D002872 ORTHO05D003204 2.2e-22 109.8 162 35.8
AT2G45060 Arabidopsis thaliana HOM05D002872 ORTHO05D003204 2.8e-22 109.4 170 35.3
C03p29810 Brassica napus HOM05D002872 ORTHO05D003204 2.8e-22 109.4 157 36.3
Thhalv10001582m.g Eutrema salsugineum HOM05D002872 ORTHO05D003204 2.8e-22 109.4 162 35.8
Sed0024906 Sechium edule HOM05D002872 ORTHO05D003204 2.8e-22 109.4 140 41.4
BraA03t11701Z Brassica rapa HOM05D002872 ORTHO05D003204 3.7e-22 109.0 157 36.3
CDE04G2393 Ceratophyllum demersum HOM05D002872 ORTHO05D003204 3.7e-22 109.0 123 44.7
AL4G44150 Arabidopsis lyrata HOM05D002872 ORTHO05D003204 4.9e-22 108.6 170 34.7
C04p71380 Brassica napus HOM05D002872 ORTHO05D003204 1.1e-21 107.5 162 34.6
arahy.Tifrunner.gnm1.ann1.PGQ24G Arachis hypogaea HOM05D002872 ORTHO05D003204 1.4e-21 107.1 167 39.5
CARHR140310 Cardamine hirsuta HOM05D002872 ORTHO05D003204 1.4e-21 107.1 121 42.1
PSO017G4318 Papaver somniferum HOM05D002872 ORTHO05D003204 1.4e-21 107.1 140 40.7
PSO170G1934 Papaver somniferum HOM05D002872 ORTHO05D003204 1.4e-21 107.1 140 40.7
ClCG06G002980 Citrullus lanatus HOM05D002872 ORTHO05D003204 1.8e-21 106.7 140 39.3
Carub.0004s2765 Capsella rubella HOM05D002872 ORTHO05D003204 2.4e-21 106.3 121 42.1
BcaC02g07132 Brassica carinata HOM05D002872 ORTHO05D003204 3.1e-21 105.9 162 34.6
BolC4t28644H Brassica oleracea HOM05D002872 ORTHO05D003204 3.1e-21 105.9 162 34.6
Potri.014G058700 Populus trichocarpa HOM05D002872 ORTHO05D003204 1.2e-20 104.0 122 45.1
Hund17062 Selenicereus undatus HOM05D002872 ORTHO05D003204 1.6e-20 103.6 112 44.6
Cpa.g.c27558 Carica papaya HOM05D002872 ORTHO05D003204 1.3e-19 100.5 126 38.9
BcaNung06148 Brassica carinata HOM05D002872 ORTHO05D003204 6.6e-19 98.2 185 31.9
Migut.N01761 Erythranthe guttata HOM05D002872 ORTHO05D003204 6.6e-19 98.2 105 45.7
unitig_22.g6799 Utricularia gibba HOM05D002872 ORTHO05D003204 7.3e-18 94.7 132 38.6
Dinv39803 Davidia involucrata HOM05D002872 ORTHO05D003204 1.2e-17 94.0 86 51.2
Haze_02724 Corylus avellana HOM05D002872 ORTHO05D003204 1.8e-16 90.1 169 36.7
SGA_v2.0_scaffold43G16519 Striga asiatica HOM05D002872 ORTHO05D003204 6.8e-16 88.2 161 36.0
A03p24980 Brassica napus HOM05D002872 ORTHO05D003204 8.9e-16 87.8 161 31.7
Nitab4.5_0002304g0050 Nicotiana tabacum HOM05D002872 ORTHO05D003204 5.8e-15 85.1 66 60.6
CAN.G899.13 Capsicum annuum HOM05D002872 ORTHO05D003204 2.2e-14 83.2 66 59.1
Ah.05g173580 Amaranthus hybridus HOM05D002872 ORTHO05D003204 1.1e-13 80.9 91 41.8
Mapoly0004s0186 Marchantia polymorpha HOM05D002872 ORTHO05D003204 5.4e-13 78.6 112 34.8
SEGI_35371 Sequoiadendron giganteum HOM05D002872 ORTHO05D003204 1.6e-12 77.0 113 34.5
MBI04_g09510_MAGBIO Magnolia biondii HOM05D002872 ORTHO05D003204 3.5e-12 75.9 117 37.6
Sopen01g019280 Solanum pennellii HOM05D002872 ORTHO05D003204 1.0e-11 74.3 113 36.3
Solyc01g049960.4 Solanum lycopersicum HOM05D002872 ORTHO05D003204 6.6e-11 71.6 113 36.3
Lsat_1_v5_gn_6_56180 Lactuca sativa HOM05D002872 ORTHO05D003204 1.1e-10 70.9 133 30.8
Nitab4.5_0000890g0190 Nicotiana tabacum HOM05D002872 ORTHO05D003204 1.1e-10 70.9 117 34.2
PSO339G4532 Papaver somniferum HOM05D002872 ORTHO05D003204 2.5e-10 69.7 137 32.8
PSO384G4623 Papaver somniferum HOM05D002872 ORTHO05D003204 3.3e-10 69.3 137 32.8
TAR623G1141 Trochodendron aralioides HOM05D002872 ORTHO05D003204 5.6e-10 68.6 132 34.1
MBI19_g09318_MAGBIO Magnolia biondii HOM05D002872 ORTHO05D003204 9.5e-10 67.8 116 31.9
Cc01_g00260 Coffea canephora HOM05D002872 ORTHO05D003204 1.6e-09 67.0 133 32.3
ECA233G5319 Erigeron canadensis HOM05D000141 ORTHO05D004038 2.1e-09 66.6 99 34.3
Phvul.002G101500 Phaseolus vulgaris HOM05D002872 ORTHO05D003204 2.1e-09 66.6 114 32.5
arahy.Tifrunner.gnm1.ann1.WYYM4H Arachis hypogaea HOM05D002872 ORTHO05D003204 3.6e-09 65.9 104 31.7
Carub.0007s1455 Capsella rubella HOM05D002872 ORTHO05D003204 3.6e-09 65.9 100 33.0
Aqoxy1G00089 Aquilegia oxysepala HOM05D002872 ORTHO05D003204 6.2e-09 65.1 112 33.0
Aqoxy386s003 Aquilegia oxysepala HOM05D002872 ORTHO05D003204 6.2e-09 65.1 112 33.0
Glyma.20G025000 Glycine max HOM05D002872 ORTHO05D003204 1.1e-08 64.3 104 31.7
AL7G26550 Arabidopsis lyrata HOM05D002872 ORTHO05D003204 1.4e-08 63.9 100 33.0
GSVIVG01025507001 Vitis vinifera HOM05D002872 ORTHO05D003204 1.4e-08 63.9 104 32.7
Gohir.A13G211000 Gossypium hirsutum HOM05D002872 ORTHO05D003204 1.8e-08 63.5 101 35.6
Psat7g134440 Pisum sativum HOM05D002872 ORTHO05D003204 1.8e-08 63.5 104 32.7
VMungo0251G2931 Vigna mungo HOM05D002872 ORTHO05D003204 1.8e-08 63.5 107 33.6
HPP92_008921 Vanilla planifolia HOM05D005079 ORTHO05D006362 2.3e-08 63.2 120 30.8
BcaC06g32751 Brassica carinata HOM05D002872 ORTHO05D003204 4.0e-08 62.4 100 33.0
Glyma.07G225100 Glycine max HOM05D002872 ORTHO05D003204 4.0e-08 62.4 104 31.7
THA.LOC104811711 Tarenaya hassleriana HOM05D002872 ORTHO05D003204 4.0e-08 62.4 100 34.0
MELO3C015562.2 Cucumis melo HOM05D002872 ORTHO05D003204 5.2e-08 62.0 104 33.7
Dinv01806 Davidia involucrata HOM05D002872 ORTHO05D003204 5.2e-08 62.0 136 31.6
Lj2A888G14 Lonicera japonica HOM05D002872 ORTHO05D003204 5.2e-08 62.0 98 35.7
Nn2g15900 Nelumbo nucifera HOM05D002872 ORTHO05D003204 5.2e-08 62.0 130 29.2
C01p22220 Brassica napus HOM05D002872 ORTHO05D003204 6.8e-08 61.6 100 34.0
BolC1t02152H Brassica oleracea HOM05D002872 ORTHO05D003204 6.8e-08 61.6 100 34.0
Ca_18794_v3 Cicer arietinum L. HOM05D002872 ORTHO05D003204 6.8e-08 61.6 104 30.8
A01p17620 Brassica napus HOM05D002872 ORTHO05D003204 8.9e-08 61.2 100 33.0
BraA01t01715Z Brassica rapa HOM05D002872 ORTHO05D003204 8.9e-08 61.2 100 33.0
Lalb_Chr09g0328951 Lupinus albus HOM05D002872 ORTHO05D003204 8.9e-08 61.2 90 33.3
BcaC09g50695 Brassica carinata HOM05D002872 ORTHO05D003204 1.5e-07 60.5 100 34.0
ClCG03G014660 Citrullus lanatus HOM05D002872 ORTHO05D003204 1.5e-07 60.5 104 32.7
HanXRQChr02g0057611 Helianthus annuus HOM05D002872 ORTHO05D003204 1.5e-07 60.5 112 30.4
Pp3c20_17010 Physcomitrium patens HOM05D002872 ORTHO05D003204 1.5e-07 60.5 112 31.2
ATR0068G080 Amborella trichopoda HOM05D002872 ORTHO05D003204 2.0e-07 60.1 133 29.3
BcaNung02424 Brassica carinata HOM05D002872 ORTHO05D003204 2.6e-07 59.7 100 34.0
CARHR233960 Cardamine hirsuta HOM05D002872 ORTHO05D003204 2.6e-07 59.7 100 33.0
Sed0004485 Sechium edule HOM05D002872 ORTHO05D003204 2.6e-07 59.7 104 31.7
AagrBONN_evm.TU.Sc2ySwM_362.2790 Anthoceros agrestis HOM05D002872 ORTHO05D003204 3.4e-07 59.3 108 29.6
arahy.Tifrunner.gnm1.ann1.BJ2ABN Arachis hypogaea HOM05D002872 ORTHO05D003204 3.4e-07 59.3 66 39.4
A03p56670 Brassica napus HOM05D002872 ORTHO05D003204 3.4e-07 59.3 100 32.0
Thhalv10026011m.g Eutrema salsugineum HOM05D002872 ORTHO05D003204 3.4e-07 59.3 100 33.0
Hma1.2p1_0589F.1_g184710 Hydrangea macrophylla HOM05D002872 ORTHO05D003204 3.4e-07 59.3 98 33.7
Sp7g24310 Schrenkiella parvula HOM05D002872 ORTHO05D003204 3.4e-07 59.3 100 34.0
TPR.G34033 Trifolium pratense HOM05D002872 ORTHO05D003204 3.4e-07 59.3 120 29.2
Atru.chr3.2058 Acer truncatum HOM05D002872 ORTHO05D003204 4.4e-07 58.9 100 34.0
SMO230G0092 Selaginella moellendorffii HOM05D002872 ORTHO05D003204 4.4e-07 58.9 112 25.0
Oeu018898.1 Olea europaea HOM05D002872 ORTHO05D003204 7.5e-07 58.2 98 31.6
TWI34G0676 Tripterygium wilfordii HOM05D002872 ORTHO05D003204 9.8e-07 57.8 100 32.0
Potri.001G001300 Populus trichocarpa HOM05D002872 ORTHO05D003204 1.3e-06 57.4 100 32.0
SGA_v2.0_scaffold6G03331 Striga asiatica HOM05D002872 ORTHO05D003204 1.3e-06 57.4 98 34.7
Aa31LG5G11760 Aethionema arabicum HOM05D002872 ORTHO05D003204 2.2e-06 56.6 119 28.6
Medtr4g083250 Medicago truncatula HOM05D002872 ORTHO05D003204 2.2e-06 56.6 91 30.8
Ciclev10016445m.g Citrus clementina HOM05D002872 ORTHO05D003204 2.9e-06 56.2 100 34.0
Eucgr.J01745 Eucalyptus grandis HOM05D002872 ORTHO05D003204 2.9e-06 56.2 104 33.7
Migut.N00530 Erythranthe guttata HOM05D002872 ORTHO05D003204 3.7e-06 55.8 98 31.6
Prupe.6G001300 Prunus persica HOM05D002872 ORTHO05D003204 3.7e-06 55.8 108 32.4
Lj4g0027888 Lotus japonicus HOM05D002872 ORTHO05D003204 4.9e-06 55.5 108 30.6


User provided reference genes

Program Settings