Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031854 Daucus carota HOM05D002492 ORTHO05D002621 3.3e-239 831.2 399 100.0
DCAR_031408 Daucus carota HOM05D002492 ORTHO05D002621 8.7e-83 311.6 222 66.7
DCAR_031399 Daucus carota HOM05D002492 ORTHO05D002621 9.6e-82 308.1 222 65.8
DCAR_031412 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-66 257.7 216 55.6
DCAR_028510 Daucus carota HOM05D002492 ORTHO05D002621 3.7e-65 253.1 172 67.4
DCAR_031407 Daucus carota HOM05D002492 ORTHO05D002621 5.8e-63 245.7 212 56.1
DCAR_028507 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-60 237.7 418 33.0
DCAR_017537 Daucus carota HOM05D022071 ORTHO05D002621 2.8e-57 226.9 345 38.6
DCAR_031396 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-56 224.2 336 36.9
DCAR_017538 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-46 191.8 199 45.7
DCAR_017541 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-44 183.7 211 42.2
DCAR_031404 Daucus carota HOM05D002492 ORTHO05D002621 5.1e-43 179.5 208 41.3
DCAR_031400 Daucus carota HOM05D000106 ORTHO05D002621 1.3e-41 174.9 209 42.1
DCAR_011193 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-40 171.0 339 30.4
DCAR_028508 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-38 164.9 129 58.1
DCAR_031409 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-38 162.9 171 46.2
DCAR_028512 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-37 160.2 209 40.7
DCAR_017539 Daucus carota HOM05D002492 ORTHO05D002621 3.9e-35 153.3 171 43.3
DCAR_031397 Daucus carota HOM05D002492 ORTHO05D002621 3.9e-35 153.3 171 43.3
DCAR_018000 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-33 148.3 413 27.1
DCAR_031855 Daucus carota HOM05D002492 ORTHO05D002621 4.8e-33 146.4 209 37.3
DCAR_017540 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-31 141.7 214 36.9
DCAR_031398 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-30 136.0 213 31.0
DCAR_027466 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-28 130.6 205 36.1
DCAR_017018 Daucus carota HOM05D002492 ORTHO05D002621 6.1e-28 129.4 205 34.1
DCAR_017879 Daucus carota HOM05D002492 ORTHO05D002621 8.0e-28 129.0 220 31.8
DCAR_024224 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-27 127.5 202 35.1
DCAR_031642 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-26 124.8 211 29.9
DCAR_005612 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-23 113.2 168 35.7
DCAR_017278 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-22 112.1 168 36.3
DCAR_010634 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-22 110.9 168 38.1
DCAR_021161 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-22 110.2 205 29.3
DCAR_022677 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-22 110.2 206 29.6
DCAR_015810 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-22 109.4 358 24.9
DCAR_001053 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-21 108.2 208 28.8
DCAR_029614 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-21 108.2 216 31.5
DCAR_031411 Daucus carota HOM05D002492 ORTHO05D002621 1.9e-21 107.8 166 34.9
DCAR_020330 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-21 105.9 165 35.8
DCAR_028506 Daucus carota HOM05D002492 ORTHO05D002621 9.4e-21 105.5 106 46.2
DCAR_001054 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-20 104.8 209 29.2
DCAR_005968 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-20 104.4 213 28.6
DCAR_017486 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-20 104.4 196 27.0
DCAR_020287 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-20 104.4 213 28.6
DCAR_028491 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-20 104.4 159 33.3
DCAR_031757 Daucus carota HOM05D002492 ORTHO05D002621 3.6e-20 103.6 161 32.9
DCAR_010630 Daucus carota HOM05D002492 ORTHO05D002621 4.7e-20 103.2 169 34.9
DCAR_017468 Daucus carota HOM05D002492 ORTHO05D002621 8.0e-20 102.4 168 33.9
DCAR_002614 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-19 100.5 168 33.3
DCAR_017878 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-19 100.5 197 26.4
DCAR_024285 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-19 100.5 170 35.3
DCAR_026147 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-19 100.5 199 28.1
DCAR_031312 Daucus carota HOM05D002492 ORTHO05D002621 4.0e-19 100.1 196 31.1
DCAR_010812 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-18 98.2 368 23.6
DCAR_029452 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-18 97.4 196 29.6
DCAR_024328 Daucus carota HOM05D002492 ORTHO05D002621 7.5e-18 95.9 159 30.8
DCAR_010788 Daucus carota HOM05D002492 ORTHO05D002621 9.8e-18 95.5 153 30.1
DCAR_024329 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-17 94.4 175 30.9
DCAR_031756 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-17 94.4 168 32.1
DCAR_024352 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-17 94.0 156 35.9
DCAR_024354 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-17 94.0 165 31.5
DCAR_015930 Daucus carota HOM05D002492 ORTHO05D002621 4.8e-17 93.2 168 31.5
DCAR_010474 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-17 92.8 168 31.5
DCAR_001183 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-16 90.5 177 33.3
DCAR_017458 Daucus carota HOM05D002492 ORTHO05D002621 4.1e-16 90.1 173 28.9
DCAR_024355 Daucus carota HOM05D002492 ORTHO05D002621 9.1e-16 89.0 167 30.5
DCAR_019328 Daucus carota HOM05D005446 ORTHO05D006597 1.6e-15 88.2 167 28.7
DCAR_011402 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-15 87.8 172 29.7
DCAR_030199 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-15 86.7 156 28.8
DCAR_027578 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-15 86.3 220 26.8
DCAR_024728 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-14 85.5 421 21.6
DCAR_031459 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-14 84.3 171 27.5
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 2.2e-14 84.3 209 26.3
DCAR_023749 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-14 84.0 155 33.5
DCAR_008877 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-14 83.6 165 28.5
DCAR_026108 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-14 83.6 170 30.0
DCAR_009800 Daucus carota HOM05D007374 ORTHO05D009283 5.0e-14 83.2 197 27.4
DCAR_030130 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-14 82.8 215 28.4
DCAR_015811 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-13 82.0 199 25.6
DCAR_031414 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-13 82.0 169 28.4
DCAR_017737 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-13 80.5 204 27.0
DCAR_025599 Daucus carota HOM05D002492 ORTHO05D002621 4.2e-13 80.1 210 24.3
DCAR_022741 Daucus carota HOM05D002492 ORTHO05D002621 5.5e-13 79.7 168 28.0
DCAR_028337 Daucus carota HOM05D002492 ORTHO05D002621 5.5e-13 79.7 169 29.6
DCAR_002704 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-12 78.6 164 31.1
DCAR_030129 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-12 77.4 144 33.3
DCAR_005544 Daucus carota HOM05D002492 ORTHO05D002621 3.6e-12 77.0 146 32.9
DCAR_022721 Daucus carota HOM05D002492 ORTHO05D002621 6.1e-12 76.3 182 26.4
DCAR_017429 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-11 74.7 170 28.8
DCAR_010867 Daucus carota HOM05D002492 ORTHO05D002621 6.8e-11 72.8 169 27.2
DCAR_016042 Daucus carota HOM05D002492 ORTHO05D002621 6.8e-11 72.8 171 26.9
DCAR_031392 Daucus carota HOM05D002492 ORTHO05D002621 6.8e-11 72.8 139 30.9
DCAR_025600 Daucus carota HOM05D002492 ORTHO05D002621 8.8e-11 72.4 140 28.6
arahy.Tifrunner.gnm1.ann1.VX4W4R Arachis hypogaea HOM05D008664 ORTHO05D000174 1.2e-10 72.0 241 24.5
DCAR_017346 Daucus carota HOM05D012849 ORTHO05D014614 1.5e-10 71.6 209 29.7
DCAR_017280 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-10 71.2 165 28.5
AL5G11810 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.6e-10 70.9 197 24.4
DCAR_020839 Daucus carota HOM05D002492 ORTHO05D002621 4.4e-10 70.1 163 23.9
arahy.Tifrunner.gnm1.ann1.U14C6K Arachis hypogaea HOM05D008664 ORTHO05D000174 5.7e-10 69.7 235 23.0
arahy.Tifrunner.gnm1.ann1.7R55CH Arachis hypogaea HOM05D008664 ORTHO05D000174 7.5e-10 69.3 241 24.5
arahy.Tifrunner.gnm1.ann1.AJVM0N Arachis hypogaea HOM05D008664 ORTHO05D000174 7.5e-10 69.3 241 24.5
DCAR_002142 Daucus carota HOM05D002492 ORTHO05D002621 7.5e-10 69.3 141 29.8
DCAR_029815 Daucus carota HOM05D002492 ORTHO05D002621 7.5e-10 69.3 178 28.1
arahy.Tifrunner.gnm1.ann1.7L6ESV Arachis hypogaea HOM05D008664 ORTHO05D000174 9.8e-10 68.9 241 24.5
DCAR_027468 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-09 68.6 130 32.3
DCAR_010020 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-09 67.8 170 27.6
TWI39G0063 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.2e-09 67.8 174 27.0
DCAR_017479 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-09 67.4 125 29.6
DCAR_021272 Daucus carota HOM05D002492 ORTHO05D002621 4.9e-09 66.6 183 28.4
TWI31G0819 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 4.9e-09 66.6 174 27.0
COL.COLO4_04226 Corchorus olitorius HOM05D007876 ORTHO05D007430 6.3e-09 66.2 168 27.4
DCAR_028338 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-09 66.2 166 25.9
BcaB01g04686 Brassica carinata HOM05D000313 ORTHO05D000065 8.3e-09 65.9 193 24.9
DCAR_016057 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-08 65.5 157 29.3
DCAR_029847 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-08 65.5 114 32.5
DCAR_028296 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-08 65.1 138 27.5
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 1.8e-08 64.7 130 29.2
DCAR_010412 Daucus carota HOM05D036599 ORTHO05D002621 3.1e-08 63.9 171 27.5
arahy.Tifrunner.gnm1.ann1.0VM956 Arachis hypogaea HOM05D008664 ORTHO05D000174 4.1e-08 63.5 238 23.5
DCAR_010019 Daucus carota HOM05D002492 ORTHO05D002621 4.1e-08 63.5 154 27.3
DCAR_017482 Daucus carota HOM05D002492 ORTHO05D002621 4.1e-08 63.5 92 37.0
A09p69300 Brassica napus HOM05D000305 ORTHO05D000065 5.4e-08 63.2 264 23.1
BolC8t52920H Brassica oleracea HOM05D000305 ORTHO05D000065 5.4e-08 63.2 264 23.1
BcaC04g20435 Brassica carinata HOM05D000305 ORTHO05D000065 7.0e-08 62.8 264 22.7
DCAR_028093 Daucus carota HOM05D002492 ORTHO05D002621 7.0e-08 62.8 157 24.8
DCAR_005616 Daucus carota HOM05D002492 ORTHO05D002621 9.2e-08 62.4 229 24.9
DCAR_028571 Daucus carota HOM05D002492 ORTHO05D002621 9.2e-08 62.4 137 25.5
DCAR_031458 Daucus carota HOM05D002492 ORTHO05D002621 9.2e-08 62.4 170 27.6
DCAR_015761 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-07 61.6 211 26.1
CARHR217650 Cardamine hirsuta HOM05D000305 ORTHO05D000065 2.0e-07 61.2 256 22.3
DCAR_005840 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-07 60.8 292 21.9
DCAR_010631 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-07 60.8 196 23.5
DCAR_016052 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-07 60.8 175 29.1
DCAR_018622 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-07 60.8 163 25.8
DCAR_028727 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-07 60.8 292 21.9
DCAR_029962 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-07 60.1 169 26.0
arahy.Tifrunner.gnm1.ann1.02KJQT Arachis hypogaea HOM05D008664 ORTHO05D000174 5.9e-07 59.7 170 27.6
C06p14790 Brassica napus HOM05D000305 ORTHO05D000065 5.9e-07 59.7 175 25.1
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 5.9e-07 59.7 175 25.1
DCAR_001182 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-07 59.7 192 26.6
DCAR_030958 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-07 59.7 205 24.4
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.9e-07 59.7 180 25.6
Sp2g07180 Schrenkiella parvula HOM05D000305 ORTHO05D000065 5.9e-07 59.7 191 23.0
TAR063G0004 Trochodendron aralioides HOM05D000824 ORTHO05D010357 5.9e-07 59.7 201 25.9
TAR091G0002 Trochodendron aralioides HOM05D000824 ORTHO05D000001 5.9e-07 59.7 201 25.9
BolC4t24845H Brassica oleracea HOM05D000305 ORTHO05D000065 7.7e-07 59.3 174 24.1
TWI38G1001 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.0e-06 58.9 180 25.0
DCAR_000282 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-06 58.5 113 29.2
DCAR_014850 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-06 58.2 171 25.7
DCAR_018002 Daucus carota HOM05D036599 ORTHO05D002621 1.7e-06 58.2 178 23.6
TWI63G1232 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.9e-06 57.4 194 28.9
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 8.6e-06 55.8 175 26.3
DCAR_001185 Daucus carota HOM05D002492 ORTHO05D002621 8.6e-06 55.8 127 30.7
DCAR_020954 Daucus carota HOM05D002492 ORTHO05D002621 8.6e-06 55.8 121 31.4
DCAR_024727 Daucus carota HOM05D002492 ORTHO05D002621 8.6e-06 55.8 152 31.6
DCAR_031648 Daucus carota HOM05D002492 ORTHO05D002621 8.6e-06 55.8 170 26.5


User provided reference genes

Program Settings