Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031794 Daucus carota HOM05D000038 ORTHO05D177307 3.3e-80 301.6 149 100.0
DCAR_028775 Daucus carota HOM05D000038 ORTHO05D000612 9.6e-19 97.4 62 79.0
DCAR_028774 Daucus carota HOM05D000038 ORTHO05D000612 9.0e-17 90.9 62 74.2
AUR62002386 Chenopodium quinoa HOM05D000038 ORTHO05D000612 1.9e-11 73.2 62 58.1
AUR62023802 Chenopodium quinoa HOM05D000038 ORTHO05D000612 1.9e-11 73.2 62 58.1
Potri.006G091400 Populus trichocarpa HOM05D000038 ORTHO05D000612 1.9e-11 73.2 70 50.0
PGR004G0718 Punica granatum HOM05D000038 ORTHO05D000612 4.3e-11 72.0 71 49.3
PGR107G0002 Punica granatum HOM05D000038 ORTHO05D000612 4.3e-11 72.0 71 49.3
Sabra16G0102700 Salix brachista HOM05D000038 ORTHO05D000612 7.4e-11 71.2 70 47.1
AUR62002385 Chenopodium quinoa HOM05D000038 ORTHO05D000612 9.6e-11 70.9 62 56.5
Sabra06G0069100 Salix brachista HOM05D000038 ORTHO05D000612 9.6e-11 70.9 70 47.1
Haze_20870 Corylus avellana HOM05D000038 ORTHO05D000612 3.7e-10 68.9 70 42.9
GSVIVG01034078001 Vitis vinifera HOM05D000038 ORTHO05D000612 3.7e-10 68.9 70 44.3
EL10Ac3g06075 Beta vulgaris HOM05D000038 ORTHO05D000612 6.2e-10 68.2 71 46.5
Ciclev10011053m.g Citrus clementina HOM05D000038 ORTHO05D000612 6.2e-10 68.2 62 48.4
Manes.09G096900 Manihot esculenta HOM05D000038 ORTHO05D000612 6.2e-10 68.2 70 44.3
Potri.016G102500 Populus trichocarpa HOM05D000038 ORTHO05D000612 6.2e-10 68.2 62 48.4
Potri.016G102600 Populus trichocarpa HOM05D000038 ORTHO05D000612 6.2e-10 68.2 62 48.4
Potri.016G102900 Populus trichocarpa HOM05D000038 ORTHO05D000612 6.2e-10 68.2 62 48.4
Nn7g37202 Nelumbo nucifera HOM05D000038 ORTHO05D000612 1.4e-09 67.0 117 35.0
Sopen09g006050 Solanum pennellii HOM05D000038 ORTHO05D000612 1.4e-09 67.0 70 45.7
PGSC0003DMG400024259 Solanum tuberosum HOM05D000038 ORTHO05D000612 1.4e-09 67.0 70 45.7
PGSC0003DMG400024260 Solanum tuberosum HOM05D000038 ORTHO05D000612 1.4e-09 67.0 70 45.7
CiPaw.09G199800 Carya illinoinensis HOM05D000038 ORTHO05D000612 1.8e-09 66.6 70 42.9
Dinv37129 Davidia involucrata HOM05D000038 ORTHO05D000612 2.4e-09 66.2 62 48.4
Thecc.05G031100 Theobroma cacao HOM05D000038 ORTHO05D000612 2.4e-09 66.2 61 49.2
Ah.09g234360 Amaranthus hybridus HOM05D000038 ORTHO05D000612 3.1e-09 65.9 62 46.8
Potri.016G102700 Populus trichocarpa HOM05D000038 ORTHO05D000612 4.0e-09 65.5 62 48.4
Rhsim05G0197000 Rhododendron simsii HOM05D000038 ORTHO05D000612 4.0e-09 65.5 71 40.8
Solyc09g011330.3 Solanum lycopersicum HOM05D000038 ORTHO05D000612 5.3e-09 65.1 62 48.4
Dinv35550 Davidia involucrata HOM05D000038 ORTHO05D000612 6.9e-09 64.7 62 46.8
Cc06_g02170 Coffea canephora HOM05D000038 ORTHO05D000612 9.0e-09 64.3 62 46.8
Lsat_1_v5_gn_9_31681 Lactuca sativa HOM05D000038 ORTHO05D000612 9.0e-09 64.3 68 47.1
Lsat_1_v5_gn_9_32500 Lactuca sativa HOM05D000038 ORTHO05D000612 9.0e-09 64.3 68 47.1
Hund21158 Selenicereus undatus HOM05D000038 ORTHO05D000612 9.0e-09 64.3 66 50.0
EL10Ac3g06077 Beta vulgaris HOM05D000038 ORTHO05D000612 1.5e-08 63.5 62 46.8
Peaxi162Scf00318g00322 Petunia axillaris HOM05D000038 ORTHO05D000612 1.5e-08 63.5 62 46.8
CAN.G229.33 Capsicum annuum HOM05D000038 ORTHO05D000612 2.0e-08 63.2 70 42.9
Lsat_1_v5_gn_9_33541 Lactuca sativa HOM05D000038 ORTHO05D000612 2.6e-08 62.8 62 50.0
Cc03_g12580 Coffea canephora HOM05D000038 ORTHO05D000612 4.5e-08 62.0 62 45.2
Lsat_1_v5_gn_9_32440 Lactuca sativa HOM05D000038 ORTHO05D000612 4.5e-08 62.0 68 44.1
EL10Ac3g06074 Beta vulgaris HOM05D000038 ORTHO05D000612 5.8e-08 61.6 62 45.2
TWI53G0079 Tripterygium wilfordii HOM05D000038 ORTHO05D000612 5.8e-08 61.6 70 42.9
TAR633G1085 Trochodendron aralioides HOM05D000038 ORTHO05D000612 5.8e-08 61.6 70 42.9
Oeu013148.1 Olea europaea HOM05D000038 ORTHO05D000612 7.6e-08 61.2 70 40.0
TWI53G0450 Tripterygium wilfordii HOM05D000038 ORTHO05D000612 7.6e-08 61.2 71 45.1
Lsat_1_v5_gn_9_31461 Lactuca sativa HOM05D000038 ORTHO05D000612 9.9e-08 60.8 62 46.8
EL10Ac3g06076 Beta vulgaris HOM05D000038 ORTHO05D000612 1.3e-07 60.5 72 38.9
Lj3C962T22 Lonicera japonica HOM05D000038 ORTHO05D000612 1.3e-07 60.5 63 44.4
Oeu001843.1 Olea europaea HOM05D000038 ORTHO05D000612 1.3e-07 60.5 70 40.0
SalBow5G0645 Salvia bowleyana HOM05D000038 ORTHO05D000612 1.3e-07 60.5 72 40.3
Nn2g11266 Nelumbo nucifera HOM05D000038 ORTHO05D000612 1.7e-07 60.1 70 41.4
Nn2g11268 Nelumbo nucifera HOM05D000038 ORTHO05D000612 1.7e-07 60.1 107 35.5
Oeu013153.1 Olea europaea HOM05D000038 ORTHO05D000612 1.7e-07 60.1 125 33.6
Prupe.5G116800 Prunus persica HOM05D000038 ORTHO05D000612 2.2e-07 59.7 62 48.4
EL10Ac3g06072 Beta vulgaris HOM05D000038 ORTHO05D000612 2.9e-07 59.3 62 45.2
Gorai.006G170000 Gossypium raimondii HOM05D000038 ORTHO05D000612 2.9e-07 59.3 61 44.3
Oeu001844.1 Olea europaea HOM05D000038 ORTHO05D000612 2.9e-07 59.3 74 40.5
Lsat_1_v5_gn_9_31640 Lactuca sativa HOM05D000038 ORTHO05D000612 3.8e-07 58.9 62 43.5
Nn2g13511 Nelumbo nucifera HOM05D000038 ORTHO05D000612 6.4e-07 58.2 62 46.8
Ciclev10013547m.g Citrus clementina HOM05D000038 ORTHO05D000612 8.4e-07 57.8 58 43.1
DCAR_021339 Daucus carota HOM05D006716 ORTHO05D008396 8.4e-07 57.8 52 59.6
Nn2g13506 Nelumbo nucifera HOM05D000038 ORTHO05D000612 8.4e-07 57.8 71 39.4
Nn2g13508 Nelumbo nucifera HOM05D000038 ORTHO05D000612 1.1e-06 57.4 76 43.4
Prupe.6G263000 Prunus persica HOM05D000038 ORTHO05D000612 1.1e-06 57.4 62 48.4
TWI53G0544 Tripterygium wilfordii HOM05D000038 ORTHO05D000612 1.1e-06 57.4 72 41.7
AUR62012775 Chenopodium quinoa HOM05D000038 ORTHO05D000612 1.4e-06 57.0 62 46.8
Sc10g0008180 Simmondsia chinensis HOM05D000038 ORTHO05D000612 1.9e-06 56.6 70 41.4
TWI53G0105 Tripterygium wilfordii HOM05D000038 ORTHO05D000612 1.9e-06 56.6 72 41.7
Ah.09g234330 Amaranthus hybridus HOM05D000038 ORTHO05D000612 2.4e-06 56.2 63 44.4
CSS0004212 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000612 3.2e-06 55.8 56 46.4
HanXRQChr08g0230391 Helianthus annuus HOM05D000038 ORTHO05D000612 3.2e-06 55.8 61 45.9
Oeu001393.1 Olea europaea HOM05D000038 ORTHO05D000612 4.2e-06 55.5 62 41.9
Oeu001397.1 Olea europaea HOM05D000038 ORTHO05D000612 4.2e-06 55.5 62 41.9
Oeu001399.1 Olea europaea HOM05D000038 ORTHO05D000612 4.2e-06 55.5 62 41.9
Duzib093G1179 Durio zibethinus HOM05D000038 ORTHO05D000612 5.5e-06 55.1 58 43.1
Eucgr.K03350 Eucalyptus grandis HOM05D000038 ORTHO05D000612 5.5e-06 55.1 56 46.4
Gorai.006G169900 Gossypium raimondii HOM05D000038 ORTHO05D000612 5.5e-06 55.1 61 42.6
Nn1g09647 Nelumbo nucifera HOM05D000038 ORTHO05D000612 5.5e-06 55.1 62 45.2
Gohir.D09G148833 Gossypium hirsutum HOM05D000038 ORTHO05D000612 7.1e-06 54.7 61 42.6
Nn2g11265 Nelumbo nucifera HOM05D000038 ORTHO05D000612 7.1e-06 54.7 58 43.1
Os06g0164900 Oryza sativa ssp. japonica HOM05D000038 ORTHO05D000612 7.1e-06 54.7 59 44.1
Migut.J00276 Erythranthe guttata HOM05D000038 ORTHO05D000612 9.3e-06 54.3 70 35.7
Eucgr.K03047 Eucalyptus grandis HOM05D000038 ORTHO05D000612 9.3e-06 54.3 54 44.4
MBI05_g02649_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000612 9.3e-06 54.3 71 39.4
Prupe.5G116500 Prunus persica HOM05D000038 ORTHO05D000612 9.3e-06 54.3 61 47.5
TWI74G1679 Tripterygium wilfordii HOM05D000038 ORTHO05D000612 9.3e-06 54.3 56 41.1


User provided reference genes

Program Settings