Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031791 Daucus carota HOM05D003347 ORTHO05D003821 2.5e-35 152.9 195 100.0
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 3.7e-10 69.3 70 58.6
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 1.4e-09 67.4 70 74.3
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 2.4e-09 66.6 68 75.0
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 3.1e-09 66.2 182 41.2
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 4.0e-09 65.9 70 72.9
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 9.0e-09 64.7 74 51.4
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 1.2e-08 64.3 71 54.9
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 1.5e-08 63.9 136 41.9
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 2.6e-08 63.2 40 82.5
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 3.4e-08 62.8 70 70.0
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 5.8e-08 62.0 66 56.1
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 7.6e-08 61.6 70 57.1
ECA248G0339 Erigeron canadensis HOM05D003347 ORTHO05D003821 1.0e-07 61.2 41 73.2
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 1.0e-07 61.2 71 52.1
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 1.0e-07 61.2 64 75.0
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.0e-07 61.2 70 72.9
Nitab4.5_0013117g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.3e-07 60.8 66 72.7
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 1.3e-07 60.8 70 64.3
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.2e-07 60.1 70 52.9
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 2.9e-07 59.7 72 50.0
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.9e-07 59.7 70 65.7
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 3.8e-07 59.3 41 75.6
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.8e-07 59.3 68 70.6
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.8e-07 59.3 72 70.8
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 3.8e-07 59.3 72 66.7
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 3.8e-07 59.3 41 73.2
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 4.9e-07 58.9 72 66.7
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 6.5e-07 58.5 41 73.2
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 8.4e-07 58.2 41 73.2
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 8.4e-07 58.2 41 73.2
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 8.4e-07 58.2 69 49.3
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 1.1e-06 57.8 66 77.3
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.1e-06 57.8 151 74.2
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.1e-06 57.8 38 78.9
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 1.4e-06 57.4 73 64.4
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 1.4e-06 57.4 72 47.2
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 1.4e-06 57.4 70 55.7
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 1.4e-06 57.4 41 70.7
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.4e-06 57.4 70 52.9
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.9e-06 57.0 41 70.7
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 1.9e-06 57.0 66 65.2
SHI11423 Sapria himalayana HOM05D003347 ORTHO05D003821 1.9e-06 57.0 70 70.0
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 1.9e-06 57.0 164 57.9
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.9e-06 57.0 68 63.2
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 2.5e-06 56.6 65 53.8
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 3.2e-06 56.2 70 72.9
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 3.2e-06 56.2 69 47.8
Prupe.4G280500 Prunus persica HOM05D003347 ORTHO05D003821 4.2e-06 55.8 41 68.3
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 5.5e-06 55.5 70 61.4
Manes.12G147600 Manihot esculenta HOM05D003347 ORTHO05D003821 5.5e-06 55.5 41 68.3
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 5.5e-06 55.5 70 57.1
MELO3C023199.2 Cucumis melo HOM05D003347 ORTHO05D003821 7.1e-06 55.1 40 70.0
ClCG02G000100 Citrullus lanatus HOM05D003347 ORTHO05D003821 9.3e-06 54.7 38 71.1


User provided reference genes

Program Settings