Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031759 Daucus carota HOM05D003127 ORTHO05D174863 9.1e-85 317.0 177 100.0
DCAR_013432 Daucus carota HOM05D003127 ORTHO05D003709 5.4e-29 131.7 93 84.9
DCAR_001482 Daucus carota HOM05D000316 ORTHO05D000374 1.1e-21 107.5 67 85.1
DCAR_031701 Daucus carota HOM05D003127 ORTHO05D178057 1.2e-12 77.4 66 74.2
DCAR_016922 Daucus carota HOM05D003127 ORTHO05D003709 4.3e-10 68.9 91 56.0
Migut.J00718 Erythranthe guttata HOM05D003127 ORTHO05D003709 5.3e-08 62.0 89 47.2
ATR1089G088 Amborella trichopoda HOM05D000316 ORTHO05D000374 9.0e-08 61.2 70 52.9
unitig_26.g9147 Utricularia gibba HOM05D004834 ORTHO05D006247 9.0e-08 61.2 85 48.2
EL10Ac7g16812 Beta vulgaris HOM05D003127 ORTHO05D003709 1.2e-07 60.8 102 50.0
SMO013G0009 Selaginella moellendorffii HOM05D000316 ORTHO05D000374 1.2e-07 60.8 77 49.4
SMO356G0358 Selaginella moellendorffii HOM05D000316 ORTHO05D000374 2.6e-07 59.7 150 36.0
Mapoly0049s0111 Marchantia polymorpha HOM05D000316 ORTHO05D000374 7.7e-07 58.2 70 51.4
QL09p001122 Quercus lobata HOM05D000316 ORTHO05D000374 7.7e-07 58.2 66 51.5
Sabra16G0075000 Salix brachista HOM05D003127 ORTHO05D003709 7.7e-07 58.2 97 48.5
SEGI_41387 Sequoiadendron giganteum HOM05D000316 ORTHO05D000374 7.7e-07 58.2 73 46.6
AUR62006270 Chenopodium quinoa HOM05D003127 ORTHO05D003709 1.0e-06 57.8 85 57.6
Duzib116G0192 Durio zibethinus HOM05D000316 ORTHO05D000374 1.0e-06 57.8 67 49.3
SGA_v2.0_scaffold184G40031 Striga asiatica HOM05D003127 ORTHO05D003709 1.3e-06 57.4 96 43.8
Aqoxy6G00023 Aquilegia oxysepala HOM05D000316 ORTHO05D000374 1.7e-06 57.0 71 47.9
CSS0026324 Camellia sinensis var. sinensis HOM05D003127 ORTHO05D003709 1.7e-06 57.0 70 55.7
CiPaw.03G011800 Carya illinoinensis HOM05D000316 ORTHO05D000374 1.7e-06 57.0 72 54.2
CDE02G0304 Ceratophyllum demersum HOM05D003127 ORTHO05D003709 1.7e-06 57.0 61 57.4
AUR62037040 Chenopodium quinoa HOM05D003127 ORTHO05D003709 1.7e-06 57.0 85 57.6
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 1.7e-06 57.0 97 48.5
GSVIVG01033933001 Vitis vinifera HOM05D003127 ORTHO05D003709 1.7e-06 57.0 76 59.2
AagrBONN_evm.TU.Sc2ySwM_362.2710 Anthoceros agrestis HOM05D000316 ORTHO05D000374 2.2e-06 56.6 72 51.4
Lj9C694T3 Lonicera japonica HOM05D000316 ORTHO05D000374 2.2e-06 56.6 100 38.0
Oeu044715.1 Olea europaea HOM05D003127 ORTHO05D003709 2.2e-06 56.6 94 46.8
SEGI_21361 Sequoiadendron giganteum HOM05D000316 ORTHO05D012803 2.2e-06 56.6 77 46.8
THA.LOC104815697 Tarenaya hassleriana HOM05D000316 ORTHO05D000374 2.2e-06 56.6 71 46.5
Dinv22065 Davidia involucrata HOM05D000316 ORTHO05D000374 2.9e-06 56.2 66 51.5
HanXRQChr02g0039261 Helianthus annuus HOM05D000316 ORTHO05D000374 2.9e-06 56.2 71 50.7
Hma1.2p1_1442F.1_g283750 Hydrangea macrophylla HOM05D003127 ORTHO05D003709 2.9e-06 56.2 90 50.0
Sc20g0006650 Simmondsia chinensis HOM05D003127 ORTHO05D003709 2.9e-06 56.2 84 57.1
SGA_v2.0_scaffold35G14000 Striga asiatica HOM05D003127 ORTHO05D003709 2.9e-06 56.2 78 52.6
Thecc.05G101400 Theobroma cacao HOM05D003127 ORTHO05D003709 2.9e-06 56.2 96 43.8
TAR628G1044 Trochodendron aralioides HOM05D000316 ORTHO05D000374 2.9e-06 56.2 70 50.0
MSTRG.5906 Avicennia marina HOM05D003127 ORTHO05D003709 3.8e-06 55.8 79 54.4
CDE08G1016 Ceratophyllum demersum HOM05D003127 ORTHO05D003709 3.8e-06 55.8 87 47.1
Ca_19656_v3 Cicer arietinum L. HOM05D000316 ORTHO05D000374 3.8e-06 55.8 66 43.9
Haze_19685 Corylus avellana HOM05D003127 ORTHO05D003709 3.8e-06 55.8 103 44.7
FAN05G4371 Fragaria x ananassa HOM05D003127 ORTHO05D003709 3.8e-06 55.8 92 47.8
FAN05G5205 Fragaria x ananassa HOM05D003127 ORTHO05D003709 3.8e-06 55.8 92 47.8
Hma1.2p1_0016F.1_g011080 Hydrangea macrophylla HOM05D000316 ORTHO05D000374 3.8e-06 55.8 67 52.2
SEGI_15770 Sequoiadendron giganteum HOM05D000316 ORTHO05D012803 3.8e-06 55.8 74 47.3
Aqoxy4G02679 Aquilegia oxysepala HOM05D003127 ORTHO05D003709 5.0e-06 55.5 88 50.0
CSS0042298 Camellia sinensis var. sinensis HOM05D003127 ORTHO05D003709 5.0e-06 55.5 89 49.4
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 5.0e-06 55.5 103 44.7
COL.COLO4_29610 Corchorus olitorius HOM05D003127 ORTHO05D003709 5.0e-06 55.5 98 45.9
Haze_14015 Corylus avellana HOM05D000316 ORTHO05D000374 5.0e-06 55.5 73 46.6
Dinv31747 Davidia involucrata HOM05D003127 ORTHO05D003709 5.0e-06 55.5 97 47.4
FAN02G3899 Fragaria x ananassa HOM05D003127 ORTHO05D003709 5.0e-06 55.5 93 49.5
Lj1g0014032 Lotus japonicus HOM05D003127 ORTHO05D003709 5.0e-06 55.5 97 50.5
Lalb_Chr25g0288071 Lupinus albus HOM05D003127 ORTHO05D003709 5.0e-06 55.5 58 65.5
Rhsim01G0019900 Rhododendron simsii HOM05D000316 ORTHO05D000374 5.0e-06 55.5 103 36.9
Hund19871 Selenicereus undatus HOM05D003127 ORTHO05D003709 5.0e-06 55.5 103 42.7
Sc12g0011290 Simmondsia chinensis HOM05D000316 ORTHO05D000374 5.0e-06 55.5 66 50.0
TWI53G2011 Tripterygium wilfordii HOM05D003127 ORTHO05D003709 5.0e-06 55.5 102 49.0
MSTRG.19317 Avicennia marina HOM05D003127 ORTHO05D003709 6.5e-06 55.1 96 42.7
Eucgr.K02606 Eucalyptus grandis HOM05D003127 ORTHO05D003709 6.5e-06 55.1 65 52.3
FvH4_6g20020 Fragaria vesca HOM05D003127 ORTHO05D003709 6.5e-06 55.1 93 49.5
FAN14G3000 Fragaria x ananassa HOM05D003127 ORTHO05D003709 6.5e-06 55.1 93 49.5
Lalb_Chr19g0140421 Lupinus albus HOM05D000316 ORTHO05D000374 6.5e-06 55.1 66 47.0
PSO339G5074 Papaver somniferum HOM05D003127 ORTHO05D003709 6.5e-06 55.1 99 47.5
SEGI_27719 Sequoiadendron giganteum HOM05D000316 ORTHO05D000374 6.5e-06 55.1 98 46.9
TAR633G0344 Trochodendron aralioides HOM05D003127 ORTHO05D003709 6.5e-06 55.1 87 49.4
vmacro00792 Vaccinium macrocarpon HOM05D000316 ORTHO05D000374 6.5e-06 55.1 71 47.9
CDE06G0621 Ceratophyllum demersum HOM05D000316 ORTHO05D000374 8.5e-06 54.7 68 48.5
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 8.5e-06 54.7 67 46.3
Lsat_1_v5_gn_4_132000 Lactuca sativa HOM05D000316 ORTHO05D000374 8.5e-06 54.7 69 52.2
Medtr4g035490 Medicago truncatula HOM05D000316 ORTHO05D000374 8.5e-06 54.7 66 47.0
Sabra06G0157900 Salix brachista HOM05D003127 ORTHO05D003709 8.5e-06 54.7 57 64.9
vmacro07464 Vaccinium macrocarpon HOM05D003127 ORTHO05D003709 8.5e-06 54.7 93 46.2


User provided reference genes

Program Settings