Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031667 Daucus carota HOM05D003091 ORTHO05D003671 2.0e-14 81.3 41 100.0
DCAR_031257 Daucus carota HOM05D003091 ORTHO05D003671 5.7e-14 79.7 41 97.6
DCAR_031258 Daucus carota HOM05D003091 ORTHO05D003671 5.7e-14 79.7 41 97.6
Lalb_Chr11g0064331 Lupinus albus HOM05D003091 ORTHO05D003671 2.5e-09 64.3 39 87.2
Migut.N02369 Erythranthe guttata HOM05D003091 ORTHO05D003671 4.2e-09 63.5 37 91.9
arahy.Tifrunner.gnm1.ann1.IEZM4M Arachis hypogaea HOM05D003091 ORTHO05D003671 5.5e-09 63.2 40 82.5
AUR62000182 Chenopodium quinoa HOM05D003091 ORTHO05D003671 5.5e-09 63.2 37 89.2
AUR62006534 Chenopodium quinoa HOM05D003091 ORTHO05D003671 5.5e-09 63.2 37 89.2
DCAR_029992 Daucus carota HOM05D003091 ORTHO05D003671 5.5e-09 63.2 37 89.2
PSO339G4627 Papaver somniferum HOM05D003091 ORTHO05D003671 5.5e-09 63.2 37 89.2
PSO384G1550 Papaver somniferum HOM05D003091 ORTHO05D003671 5.5e-09 63.2 37 89.2
THA.LOC104816927 Tarenaya hassleriana HOM05D003091 ORTHO05D003671 5.5e-09 63.2 37 89.2
Atru.chr3.2779 Acer truncatum HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
Actinidia23988 Actinidia chinensis HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
ATR0580G276 Amborella trichopoda HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
Ca_12810_v3 Cicer arietinum L. HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
ClCG11G014020 Citrullus lanatus HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
MELO3C003581.2 Cucumis melo HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
CsaV3_3G047430 Cucumis sativus L. HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
DCAR_002102 Daucus carota HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
Migut.D00654 Erythranthe guttata HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
MD08G1118300 Malus domestica HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
MD15G1097600 Malus domestica HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
Oeu025901.1 Olea europaea HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
Psat6g034320 Pisum sativum HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
Potri.001G276700 Populus trichocarpa HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
Sed0002878 Sechium edule HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
Sed0016432 Sechium edule HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
HPP92_020481 Vanilla planifolia HOM05D003091 ORTHO05D003671 9.4e-09 62.4 37 89.2
Ah.06g194480 Amaranthus hybridus HOM05D000189 ORTHO05D000474 1.2e-08 62.0 37 89.2
EL10Ac4g10135 Beta vulgaris HOM05D003091 ORTHO05D003671 1.2e-08 62.0 37 89.2
EL10Ac4g10152 Beta vulgaris HOM05D003091 ORTHO05D003671 1.2e-08 62.0 37 89.2
EL10Ac4g10159 Beta vulgaris HOM05D001013 ORTHO05D004597 1.2e-08 62.0 37 89.2
MBI13_g30131_MAGBIO Magnolia biondii HOM05D003091 ORTHO05D003671 1.2e-08 62.0 37 89.2
Nn2g14838 Nelumbo nucifera HOM05D003091 ORTHO05D003671 1.2e-08 62.0 37 86.5
Nn7g36666 Nelumbo nucifera HOM05D003091 ORTHO05D003671 1.2e-08 62.0 37 86.5
Os02g0117400 Oryza sativa ssp. japonica HOM05D003091 ORTHO05D003671 1.2e-08 62.0 37 89.2
SEGI_37865 Sequoiadendron giganteum HOM05D003091 ORTHO05D003671 1.2e-08 62.0 37 86.5
SGA_v2.0_scaffold496G52467 Striga asiatica HOM05D003091 ORTHO05D003671 1.2e-08 62.0 37 89.2
TWI60G1477 Tripterygium wilfordii HOM05D003091 ORTHO05D003671 1.2e-08 62.0 37 86.5
TAR633G0445 Trochodendron aralioides HOM05D003091 ORTHO05D003671 1.2e-08 62.0 37 86.5
Zm00001eb230050 Zea mays HOM05D003091 ORTHO05D003671 1.2e-08 62.0 40 82.5
Manes.01G179800 Manihot esculenta HOM05D003091 ORTHO05D003671 1.6e-08 61.6 37 89.2
Actinidia06957 Actinidia chinensis HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
arahy.Tifrunner.gnm1.ann1.H5V5GF Arachis hypogaea HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
arahy.Tifrunner.gnm1.ann1.Y550S7 Arachis hypogaea HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Cfa013345 Carpinus fangiana HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
CiPaw.07G207100 Carya illinoinensis HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
CiPaw.08G023500 Carya illinoinensis HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Ca_15619_v3 Cicer arietinum L. HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Cc01_g05530 Coffea canephora HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
COL.COLO4_05198 Corchorus olitorius HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Haze_21853 Corylus avellana HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Dinv05057 Davidia involucrata HOM05D003091 ORTHO05D003671 2.1e-08 61.2 39 82.1
Dinv36179 Davidia involucrata HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Duzib150G1361 Durio zibethinus HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Duzib168G2072 Durio zibethinus HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Glyma.04G080200 Glycine max HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Glyma.06G081900 Glycine max HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Glyma.14G142100 Glycine max HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Gohir.A05G071500 Gossypium hirsutum HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Gohir.A13G219200 Gossypium hirsutum HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Gohir.D05G074400 Gossypium hirsutum HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Gohir.D13G222900 Gossypium hirsutum HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Gorai.009G075500 Gossypium raimondii HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Gorai.013G254000 Gossypium raimondii HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Lj1C287G1 Lonicera japonica HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
MBI19_g08870_MAGBIO Magnolia biondii HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Medtr3g109932 Medicago truncatula HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Medtr3g109968 Medicago truncatula HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
PGR054G0002 Punica granatum HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
PGR119G0724 Punica granatum HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Thecc.09G249800 Theobroma cacao HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
TPR.G12114 Trifolium pratense HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 89.2
TWI34G0762 Tripterygium wilfordii HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
TAR369G0586 Trochodendron aralioides HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
TAR623G1108 Trochodendron aralioides HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
vmacro04023 Vaccinium macrocarpon HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
GSVIVG01037261001 Vitis vinifera HOM05D003091 ORTHO05D003671 2.1e-08 61.2 37 86.5
Aqoxy2G00365 Aquilegia oxysepala HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
AL5G12770 Arabidopsis lyrata HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
AT2G03120 Arabidopsis thaliana HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
arahy.Tifrunner.gnm1.ann1.APBA8N Arachis hypogaea HOM05D003091 ORTHO05D003671 2.7e-08 60.8 40 75.0
MSTRG.17631 Avicennia marina HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BcaB07g30310 Brassica carinata HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BcaB07g30686 Brassica carinata HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BcaC03g17184 Brassica carinata HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BcaC04g21506 Brassica carinata HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BcaC06g31199 Brassica carinata HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BcaC06g34018 Brassica carinata HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
A02p33230 Brassica napus HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
A06p43280 Brassica napus HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
A09p24090 Brassica napus HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
C02p51130 Brassica napus HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
C07p33670 Brassica napus HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
C09p30980 Brassica napus HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BolC2t11200H Brassica oleracea HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BolC7t43877H Brassica oleracea HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BolC9t55957H Brassica oleracea HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BraA02t08347Z Brassica rapa HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BraA06t27214Z Brassica rapa HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
BraA09t38009Z Brassica rapa HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
CSS0031638 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
CSS0037821 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
Carub.0005s0195 Capsella rubella HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
CARHR145460 Cardamine hirsuta HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
Eucgr.J00700 Eucalyptus grandis HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
Thhalv10004551m.g Eutrema salsugineum HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
Lj1g0011096 Lotus japonicus HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
Potri.009G071600 Populus trichocarpa HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
Prupe.1G452500 Prunus persica HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
Sp2g14090 Schrenkiella parvula HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
unitig_27.g25006 Utricularia gibba HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
VMungo1309G1449 Vigna mungo HOM05D003091 ORTHO05D003671 2.7e-08 60.8 37 86.5
CAN.G96.11 Capsicum annuum HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
FvH4_2g36110 Fragaria vesca HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
FAN15G0484 Fragaria x ananassa HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
FAN27G0636 Fragaria x ananassa HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
Manes.02G140400 Manihot esculenta HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
Nitab4.5_0000730g0130 Nicotiana tabacum HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
Nitab4.5_0001500g0090 Nicotiana tabacum HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
Oeu043280.2 Olea europaea HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
Peaxi162Scf00004g04618 Petunia axillaris HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
Hund07443 Selenicereus undatus HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
Hund21985 Selenicereus undatus HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
Solyc11g064790.2 Solanum lycopersicum HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
Sopen11g024530 Solanum pennellii HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
PGSC0003DMG400009454 Solanum tuberosum HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
SGA_v2.0_scaffold29G12260 Striga asiatica HOM05D003091 ORTHO05D003671 3.6e-08 60.5 37 86.5
Ciclev10015833m.g Citrus clementina HOM05D003091 ORTHO05D003671 4.7e-08 60.1 37 86.5
Lsat_1_v5_gn_9_48160 Lactuca sativa HOM05D003091 ORTHO05D003671 4.7e-08 60.1 37 86.5
Zm00001eb209380 Zea mays HOM05D003091 ORTHO05D003671 4.7e-08 60.1 37 86.5
arahy.Tifrunner.gnm1.ann1.0Z0DIR Arachis hypogaea HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 83.8
CDE02G3432 Ceratophyllum demersum HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 83.8
CDE06G0965 Ceratophyllum demersum HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 83.8
Duzib170G0109 Durio zibethinus HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 83.8
Gohir.A07G120600 Gossypium hirsutum HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 83.8
Gohir.D07G124800 Gossypium hirsutum HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 83.8
Gorai.001G134600 Gossypium raimondii HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 83.8
Phvul.009G106300 Phaseolus vulgaris HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 83.8
Rhsim01G0194700 Rhododendron simsii HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 83.8
Rhsim13G0211100 Rhododendron simsii HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 83.8
PGSC0003DMG400022714 Solanum tuberosum HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 86.5
THA.LOC104826452 Tarenaya hassleriana HOM05D003091 ORTHO05D003671 6.1e-08 59.7 37 86.5
CANSAT25G3396 Cannabis sativa HOM05D003091 ORTHO05D003671 8.0e-08 59.3 37 83.8
Medtr1g008280 Medicago truncatula HOM05D003091 ORTHO05D003671 8.0e-08 59.3 37 83.8
Cpa.g.c45617 Carica papaya HOM05D003091 ORTHO05D003671 1.0e-07 58.9 36 86.1
ECA232G2856 Erigeron canadensis HOM05D003091 ORTHO05D003671 1.0e-07 58.9 37 83.8
FAN20G1214 Fragaria x ananassa HOM05D003091 ORTHO05D003671 1.0e-07 58.9 37 83.8
CAN.G917.5 Capsicum annuum HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
Hma1.2p1_0129F.1_g060120 Hydrangea macrophylla HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
Mapoly0057s0081 Marchantia polymorpha HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 81.1
Nitab4.5_0000718g0270 Nicotiana tabacum HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
Nitab4.5_0005212g0030 Nicotiana tabacum HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
Peaxi162Scf00032g02617 Petunia axillaris HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
Psat0s3378g0040 Pisum sativum HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
RcHm_v2.0_Chr6g0305761 Rosa chinensis HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
Sabra09G0053900 Salix brachista HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
Sc16g0011120 Simmondsia chinensis HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
Solyc01g008820.3 Solanum lycopersicum HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
Sopen01g004330 Solanum pennellii HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
TPR.G1379 Trifolium pratense HOM05D003091 ORTHO05D003671 1.4e-07 58.5 37 83.8
Lalb_Chr08g0243271 Lupinus albus HOM05D003091 ORTHO05D003671 1.8e-07 58.2 37 83.8
Pp3c3_24000 Physcomitrium patens HOM05D003091 ORTHO05D003671 1.8e-07 58.2 37 81.1
Pp3c3_24020 Physcomitrium patens HOM05D003091 ORTHO05D003671 1.8e-07 58.2 37 81.1
Aa31LG10G9280 Aethionema arabicum HOM05D003091 ORTHO05D003671 4.0e-07 57.0 37 81.1
HanXRQChr13g0388471 Helianthus annuus HOM05D003091 ORTHO05D003671 4.0e-07 57.0 37 83.8
Lalb_Chr23g0269441 Lupinus albus HOM05D003091 ORTHO05D003671 4.0e-07 57.0 37 83.8
CSS0001188 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 5.2e-07 56.6 37 83.8
CSS0007409 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 5.2e-07 56.6 37 83.8
HanXRQChr08g0216751 Helianthus annuus HOM05D003091 ORTHO05D003671 5.2e-07 56.6 37 83.8
Lsat_1_v5_gn_8_26901 Lactuca sativa HOM05D003091 ORTHO05D003671 5.2e-07 56.6 37 83.8
PSO063G2975 Papaver somniferum HOM05D003091 ORTHO05D003671 5.2e-07 56.6 37 75.7
CBR_g39566 Chara braunii HOM05D003091 ORTHO05D003671 6.7e-07 56.2 37 81.1
Medtr5g031710 Medicago truncatula HOM05D003091 ORTHO05D003671 6.7e-07 56.2 36 80.6
ECA233G4335 Erigeron canadensis HOM05D003091 ORTHO05D003671 1.5e-06 55.1 37 81.1
SMO172G0078 Selaginella moellendorffii HOM05D003091 ORTHO05D003671 1.5e-06 55.1 37 78.4
Sc16g0011130 Simmondsia chinensis HOM05D003091 ORTHO05D003671 9.7e-06 52.4 35 74.3


User provided reference genes

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