Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031631 Daucus carota HOM05D002030 ORTHO05D007413 2.1e-169 599.0 310 100.0
DCAR_031630 Daucus carota HOM05D002030 ORTHO05D007413 6.4e-142 507.7 284 90.5
Dinv05065 Davidia involucrata HOM05D002030 ORTHO05D007413 1.6e-52 210.7 333 42.3
Lj4P151T58 Lonicera japonica HOM05D002030 ORTHO05D007413 3.2e-40 169.9 302 37.4
Gohir.D05G074500 Gossypium hirsutum HOM05D002030 ORTHO05D007413 9.5e-37 158.3 315 37.8
Gohir.A05G071600 Gossypium hirsutum HOM05D002030 ORTHO05D007413 3.6e-36 156.4 315 37.8
Gorai.009G075600 Gossypium raimondii HOM05D002030 ORTHO05D007413 3.6e-36 156.4 315 37.5
COL.COLO4_33273 Corchorus olitorius HOM05D002030 ORTHO05D007413 4.0e-35 152.9 321 37.4
Haze_02982 Corylus avellana HOM05D002030 ORTHO05D007413 4.0e-35 152.9 316 35.4
CiPaw.06G055000 Carya illinoinensis HOM05D002030 ORTHO05D007413 5.2e-35 152.5 313 35.5
Atru.chr3.2803 Acer truncatum HOM05D002030 ORTHO05D007413 1.2e-34 151.4 313 35.5
Cfa019819 Carpinus fangiana HOM05D002030 ORTHO05D007413 1.5e-34 151.0 312 35.6
QL04p021544 Quercus lobata HOM05D002030 ORTHO05D007413 2.0e-34 150.6 313 35.8
Cpa.g.sc529.1 Carica papaya HOM05D002030 ORTHO05D007413 2.6e-34 150.2 318 34.6
Cfa010958 Carpinus fangiana HOM05D002030 ORTHO05D007413 3.4e-34 149.8 313 35.1
Manes.02G141000 Manihot esculenta HOM05D002030 ORTHO05D007413 4.4e-34 149.4 315 34.9
Nn7g36615 Nelumbo nucifera HOM05D002030 ORTHO05D007413 4.9e-33 146.0 326 32.2
MD11G1194100 Malus domestica HOM05D002030 ORTHO05D007413 4.1e-32 142.9 318 32.7
THA.LOC104800445 Tarenaya hassleriana HOM05D002030 ORTHO05D007413 7.8e-31 138.7 313 33.2
Potri.001G277200 Populus trichocarpa HOM05D002030 ORTHO05D007413 1.0e-30 138.3 321 33.0
AUR62039829 Chenopodium quinoa HOM05D002030 ORTHO05D004391 1.3e-30 137.9 330 31.8
Duzib168G1726 Durio zibethinus HOM05D002030 ORTHO05D007413 3.0e-30 136.7 316 34.8
AUR62000179 Chenopodium quinoa HOM05D002030 ORTHO05D007413 5.1e-30 136.0 287 34.8
Sabra16G0171300 Salix brachista HOM05D002030 ORTHO05D007413 6.6e-30 135.6 328 32.3
Sc19g0005890 Simmondsia chinensis HOM05D002030 ORTHO05D007413 4.3e-29 132.9 320 32.8
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 5.6e-29 132.5 276 36.2
MELO3C015133.2 Cucumis melo HOM05D002030 ORTHO05D007413 2.1e-28 130.6 322 32.3
CsaV3_1G043250 Cucumis sativus L. HOM05D002030 ORTHO05D007413 2.1e-28 130.6 324 31.8
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 2.8e-28 130.2 278 34.5
Aqoxy1G00344 Aquilegia oxysepala HOM05D002030 ORTHO05D007413 2.4e-27 127.1 329 29.2
CANSAT25G2826 Cannabis sativa HOM05D002030 ORTHO05D007413 4.4e-26 122.9 317 30.6
GSVIVG01037252001 Vitis vinifera HOM05D002030 ORTHO05D007413 1.4e-24 117.9 314 32.2
ClCG03G012710 Citrullus lanatus HOM05D002030 ORTHO05D007413 1.9e-24 117.5 316 31.3
Ah.04g162000 Amaranthus hybridus HOM05D002030 ORTHO05D007413 7.1e-24 115.5 317 29.7
PSO384G3354 Papaver somniferum HOM05D002030 ORTHO05D007413 3.5e-23 113.2 403 25.8
PGR102G2312 Punica granatum HOM05D002030 ORTHO05D007413 1.0e-22 111.7 309 31.1
MD00G1154100 Malus domestica HOM05D002030 ORTHO05D007413 1.7e-22 110.9 310 30.0
PSO339G1606 Papaver somniferum HOM05D002030 ORTHO05D007413 3.9e-22 109.8 395 25.1
Eucgr.B03727 Eucalyptus grandis HOM05D002030 ORTHO05D007413 3.4e-18 96.7 315 27.3
Sed0013906 Sechium edule HOM05D002030 ORTHO05D007413 5.8e-18 95.9 369 26.6
TAR628G0523 Trochodendron aralioides HOM05D002030 ORTHO05D007413 6.4e-17 92.4 169 32.5
Hma1.2p1_0872F.1_g231160 Hydrangea macrophylla HOM05D002030 ORTHO05D007413 4.6e-15 86.3 202 34.2
MBI03_g13094_MAGBIO Magnolia biondii HOM05D002030 ORTHO05D007413 8.7e-14 82.0 212 29.2
Ca_21049_v3 Cicer arietinum L. HOM05D002030 ORTHO05D007413 4.3e-13 79.7 87 50.6
HanXRQChr10g0319281 Helianthus annuus HOM05D002030 ORTHO05D007413 4.3e-13 79.7 73 53.4
TAR628G0894 Trochodendron aralioides HOM05D002030 ORTHO05D007413 9.6e-13 78.6 151 36.4
Cc01_g00100 Coffea canephora HOM05D002030 ORTHO05D007413 6.2e-12 75.9 76 55.3
CDE02G3397 Ceratophyllum demersum HOM05D002030 ORTHO05D007413 1.1e-11 75.1 216 29.6
Oeu024896.1 Olea europaea HOM05D002030 ORTHO05D007413 1.4e-11 74.7 63 54.0
SHI24995 Sapria himalayana HOM05D002030 ORTHO05D007413 1.8e-11 74.3 72 50.0
Ciclev10018312m.g Citrus clementina HOM05D002030 ORTHO05D007413 3.1e-11 73.6 60 58.3
VMungo0720G1521 Vigna mungo HOM05D002030 ORTHO05D007413 4.0e-11 73.2 68 54.4
Actinidia06954 Actinidia chinensis HOM05D002030 ORTHO05D007413 5.3e-11 72.8 68 54.4
Rhsim13G0218500 Rhododendron simsii HOM05D002030 ORTHO05D007413 5.3e-11 72.8 73 49.3
MSTRG.19666 Avicennia marina HOM05D002030 ORTHO05D007413 6.9e-11 72.4 61 54.1
ECA248G2873 Erigeron canadensis HOM05D002030 ORTHO05D007413 1.2e-10 71.6 67 53.7
Lalb_Chr02g0151181 Lupinus albus HOM05D002030 ORTHO05D007413 2.0e-10 70.9 75 50.7
Rhsim13G0212600 Rhododendron simsii HOM05D002030 ORTHO05D007413 2.0e-10 70.9 73 47.9
RcHm_v2.0_Chr6g0267091 Rosa chinensis HOM05D002030 ORTHO05D007413 2.0e-10 70.9 62 58.1
Cc04_g16190 Coffea canephora HOM05D002030 ORTHO05D007413 2.6e-10 70.5 73 52.1
Peaxi162Scf00108g00034 Petunia axillaris HOM05D002030 ORTHO05D007413 2.6e-10 70.5 68 52.9
Lsat_1_v5_gn_5_164660 Lactuca sativa HOM05D002030 ORTHO05D007413 3.4e-10 70.1 61 59.0
Medtr4g132910 Medicago truncatula HOM05D002030 ORTHO05D007413 3.4e-10 70.1 87 47.1
Prupe.1G578000 Prunus persica HOM05D002030 ORTHO05D007413 3.4e-10 70.1 61 55.7
RcHm_v2.0_Chr2g0127281 Rosa chinensis HOM05D002030 ORTHO05D007413 7.6e-10 68.9 62 54.8
CSS0014605 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 1.3e-09 68.2 84 44.0
Glyma.20G191000 Glycine max HOM05D002030 ORTHO05D007413 1.3e-09 68.2 68 54.4
Phvul.007G141800 Phaseolus vulgaris HOM05D002030 ORTHO05D007413 1.3e-09 68.2 62 54.8
ATR0693G336 Amborella trichopoda HOM05D002030 ORTHO05D007413 1.7e-09 67.8 57 56.1
CSS0026005 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 1.7e-09 67.8 87 42.5
CAN.G993.31 Capsicum annuum HOM05D002030 ORTHO05D007413 1.7e-09 67.8 61 54.1
Psat4g003440 Pisum sativum HOM05D002030 ORTHO05D007413 1.7e-09 67.8 76 50.0
TPR.G37056 Trifolium pratense HOM05D002030 ORTHO05D007413 1.7e-09 67.8 87 47.1
SGA_v2.0_scaffold45G17005 Striga asiatica HOM05D002030 ORTHO05D007413 2.2e-09 67.4 63 50.8
Lj5g0021026 Lotus japonicus HOM05D002030 ORTHO05D007413 3.8e-09 66.6 77 45.5
FvH4_3g28960 Fragaria vesca HOM05D002030 ORTHO05D007413 6.4e-09 65.9 61 54.1
Nitab4.5_0002358g0010 Nicotiana tabacum HOM05D002030 ORTHO05D007413 6.4e-09 65.9 95 36.8
Os11g0171400 Oryza sativa ssp. japonica HOM05D002030 ORTHO05D007413 6.4e-09 65.9 63 50.8
Peaxi162Scf00177g00919 Petunia axillaris HOM05D002030 ORTHO05D007413 6.4e-09 65.9 61 55.7
Zm00001eb091720 Zea mays HOM05D002030 ORTHO05D007413 6.4e-09 65.9 64 48.4
TWI09G0205 Tripterygium wilfordii HOM05D002030 ORTHO05D007413 8.4e-09 65.5 99 41.4
Migut.J01395 Erythranthe guttata HOM05D002030 ORTHO05D007413 4.2e-08 63.2 61 47.5
MD15G1397300 Malus domestica HOM05D002030 ORTHO05D007413 4.2e-08 63.2 55 56.4
Solyc06g071630.2 Solanum lycopersicum HOM05D002030 ORTHO05D007413 4.2e-08 63.2 61 52.5
Sopen06g027940 Solanum pennellii HOM05D002030 ORTHO05D007413 4.2e-08 63.2 61 52.5
Mapoly0033s0111 Marchantia polymorpha HOM05D002030 ORTHO05D007413 7.1e-08 62.4 317 23.7
PGSC0003DMG401026992 Solanum tuberosum HOM05D002030 ORTHO05D007413 7.1e-08 62.4 61 49.2
SEGI_26527 Sequoiadendron giganteum HOM05D002030 ORTHO05D007413 9.3e-08 62.0 57 47.4
unitig_0.g561 Utricularia gibba HOM05D002030 ORTHO05D007413 9.3e-08 62.0 57 45.6
Pp3c16_4000 Physcomitrium patens HOM05D002030 ORTHO05D007413 1.6e-07 61.2 306 23.9
Carub.0007s2761 Capsella rubella HOM05D002030 ORTHO05D007413 3.5e-07 60.1 69 46.4
HPP92_008257 Vanilla planifolia HOM05D002030 ORTHO05D007413 6.0e-07 59.3 61 47.5
AT4G14590 Arabidopsis thaliana HOM05D002030 ORTHO05D007413 2.3e-06 57.4 62 45.2
Sp7g12690 Schrenkiella parvula HOM05D002030 ORTHO05D007413 5.1e-06 56.2 62 45.2


User provided reference genes

Program Settings