Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031612 Daucus carota HOM05D007981 ORTHO05D001345 2.6e-202 708.8 426 100.0
Hma1.2p1_0662F.1_g198260 Hydrangea macrophylla HOM05D007981 ORTHO05D001345 6.9e-46 189.1 449 38.3
Actinidia19656 Actinidia chinensis HOM05D007981 ORTHO05D001345 6.5e-36 156.0 483 32.9
Oeu022685.1 Olea europaea HOM05D007981 ORTHO05D001345 2.7e-34 150.6 424 34.4
Thecc.09G196000 Theobroma cacao HOM05D007981 ORTHO05D001345 1.1e-32 145.2 386 36.8
GSVIVG01031362001 Vitis vinifera HOM05D007981 ORTHO05D001345 2.6e-32 144.1 443 33.9
ECA246G2938 Erigeron canadensis HOM05D007981 ORTHO05D001345 9.7e-32 142.1 458 33.6
PGSC0003DMG400042123 Solanum tuberosum HOM05D007981 ORTHO05D001345 3.1e-30 137.1 445 32.6
Lsat_1_v5_gn_3_25100 Lactuca sativa HOM05D007981 ORTHO05D001345 2.6e-29 134.0 439 33.3
Nitab4.5_0001653g0100 Nicotiana tabacum HOM05D007981 ORTHO05D001345 1.5e-27 128.3 353 36.5
Peaxi162Scf00344g00031 Petunia axillaris HOM05D007981 ORTHO05D001345 1.5e-27 128.3 455 31.0
Cc09_g04330 Coffea canephora HOM05D007981 ORTHO05D001345 5.5e-27 126.3 443 33.2
Solyc11g008840.3 Solanum lycopersicum HOM05D007981 ORTHO05D001345 6.1e-26 122.9 393 34.1
Rhsim05G0162500 Rhododendron simsii HOM05D007981 ORTHO05D001345 1.8e-25 121.3 443 34.8
CAN.G691.25 Capsicum annuum HOM05D007981 ORTHO05D001345 3.0e-25 120.6 422 32.9
Lj2C405T1 Lonicera japonica HOM05D007981 ORTHO05D001345 3.0e-25 120.6 368 38.3
TAR633G1356 Trochodendron aralioides HOM05D007981 ORTHO05D001345 3.0e-25 120.6 416 31.0
Potri.010G177000 Populus trichocarpa HOM05D007981 ORTHO05D001345 3.3e-24 117.1 344 35.8
Lj2C407T2 Lonicera japonica HOM05D007981 ORTHO05D001345 5.7e-24 116.3 370 37.8
CSS0007963 Camellia sinensis var. sinensis HOM05D007981 ORTHO05D001345 7.4e-24 115.9 441 32.9
Ciclev10017970m.g Citrus clementina HOM05D007981 ORTHO05D001345 7.4e-24 115.9 386 32.4
Manes.12G000800 Manihot esculenta HOM05D007981 ORTHO05D001345 2.8e-23 114.0 424 31.8
Sopen11g004620 Solanum pennellii HOM05D007981 ORTHO05D001345 1.8e-22 111.3 279 36.9
TWI36G0229 Tripterygium wilfordii HOM05D007981 ORTHO05D001345 2.2e-20 104.4 423 32.9
MBI07_g42070_MAGBIO Magnolia biondii HOM05D007981 ORTHO05D001345 1.1e-19 102.1 409 31.3
TAR636G1519 Trochodendron aralioides HOM05D007981 ORTHO05D001345 2.5e-19 100.9 443 29.6
PGR031G0831 Punica granatum HOM05D007981 ORTHO05D001345 6.1e-18 96.3 343 33.2
Migut.G01306 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.3e-15 88.6 366 29.5
Migut.G01129 Erythranthe guttata HOM05D007981 ORTHO05D001345 2.8e-15 87.4 376 30.1
Migut.G01327 Erythranthe guttata HOM05D007981 ORTHO05D001345 3.7e-15 87.0 366 28.7
Migut.A01091 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.4e-14 85.1 363 28.1
Migut.G01343 Erythranthe guttata HOM05D007981 ORTHO05D001345 2.7e-13 80.9 386 29.8
COL.COLO4_23424 Corchorus olitorius HOM05D007981 ORTHO05D001345 1.0e-12 79.0 268 38.4
Nitab4.5_0012874g0030 Nicotiana tabacum HOM05D007981 ORTHO05D001345 2.2e-12 77.8 376 27.9
Atru.chr10.126 Acer truncatum HOM05D007981 ORTHO05D001345 5.0e-12 76.6 363 29.2
MELO3C005819.2 Cucumis melo HOM05D007981 ORTHO05D001345 1.1e-11 75.5 261 31.8
CsaV3_5G001280 Cucumis sativus L. HOM05D007981 ORTHO05D001345 1.9e-11 74.7 265 31.3
FvH4_6g00040 Fragaria vesca HOM05D007981 ORTHO05D001345 7.2e-11 72.8 423 28.1
Migut.G01335 Erythranthe guttata HOM05D007981 ORTHO05D001345 9.4e-11 72.4 375 27.5
Sabra10G0136000 Salix brachista HOM05D007981 ORTHO05D001345 2.7e-10 70.9 381 27.0
FAN09G0734 Fragaria x ananassa HOM05D007981 ORTHO05D001345 4.7e-10 70.1 422 27.7
Migut.G01299 Erythranthe guttata HOM05D007981 ORTHO05D001345 4.0e-09 67.0 435 28.0
Migut.G01332 Erythranthe guttata HOM05D007981 ORTHO05D001345 5.2e-09 66.6 349 29.8
Migut.G01304 Erythranthe guttata HOM05D007981 ORTHO05D001345 4.4e-08 63.5 362 29.3
ClCG01G001160 Citrullus lanatus HOM05D007981 ORTHO05D001345 5.7e-08 63.2 287 29.3
Gorai.009G001400 Gossypium raimondii HOM05D007981 ORTHO05D001345 2.8e-07 60.8 256 32.0
SEGI_04024 Sequoiadendron giganteum HOM05D001930 ORTHO05D001345 2.8e-07 60.8 189 33.9
Cpa.g.sc39.107 Carica papaya HOM05D007981 ORTHO05D001345 3.7e-07 60.5 148 35.8


User provided reference genes

Program Settings