Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031594 Daucus carota HOM05D005923 ORTHO05D007376 0.0e+00 1294.3 649 100.0
Actinidia03247 Actinidia chinensis HOM05D005923 ORTHO05D007376 9.0e-231 803.9 648 63.1
Nitab4.5_0001003g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 2.6e-230 802.4 653 63.6
Haze_04596 Corylus avellana HOM05D005923 ORTHO05D007376 3.8e-229 798.5 646 63.3
Cfa006234 Carpinus fangiana HOM05D005923 ORTHO05D007376 6.5e-229 797.7 646 63.2
Dinv21358 Davidia involucrata HOM05D005923 ORTHO05D007376 3.2e-228 795.4 609 65.5
CSS0002064 Camellia sinensis var. sinensis HOM05D005923 ORTHO05D007376 7.2e-228 794.3 648 62.7
Rhsim05G0165000 Rhododendron simsii HOM05D005923 ORTHO05D007376 3.6e-227 792.0 646 61.9
CiPaw.07G083600 Carya illinoinensis HOM05D005923 ORTHO05D007376 5.7e-225 784.6 645 62.9
TWI18G0568 Tripterygium wilfordii HOM05D005923 ORTHO05D007376 7.4e-225 784.3 645 61.7
TAR365G1048 Trochodendron aralioides HOM05D005923 ORTHO05D007376 9.7e-225 783.9 649 61.9
Potri.008G077000 Populus trichocarpa HOM05D005923 ORTHO05D007376 2.4e-223 779.2 647 62.1
Duzib128G1624 Durio zibethinus HOM05D005923 ORTHO05D007376 5.3e-223 778.1 646 61.9
Manes.12G002100 Manihot esculenta HOM05D005923 ORTHO05D007376 5.3e-223 778.1 647 62.1
Peaxi162Scf00296g01112 Petunia axillaris HOM05D005923 ORTHO05D007376 9.1e-223 777.3 652 60.9
CAN.G321.22 Capsicum annuum HOM05D005923 ORTHO05D007376 1.7e-221 773.1 652 59.8
Sopen11g004360 Solanum pennellii HOM05D005923 ORTHO05D007376 2.2e-221 772.7 651 59.9
Potri.010G180800 Populus trichocarpa HOM05D005923 ORTHO05D007376 3.8e-221 771.9 647 62.0
QL10p015972 Quercus lobata HOM05D005923 ORTHO05D007376 7.2e-220 767.7 645 60.8
Gohir.D03G071400 Gossypium hirsutum HOM05D005923 ORTHO05D007376 9.4e-220 767.3 648 61.6
Gorai.003G088600 Gossypium raimondii HOM05D005923 ORTHO05D007376 1.6e-219 766.5 648 61.4
Oeu034703.2 Olea europaea HOM05D005923 ORTHO05D007376 2.1e-219 766.1 651 60.5
PGSC0003DMG400016251 Solanum tuberosum HOM05D005923 ORTHO05D007376 6.1e-219 764.6 635 60.6
COL.COLO4_36605 Corchorus olitorius HOM05D005923 ORTHO05D007376 2.3e-218 762.7 649 61.3
Atru.chr12.1669 Acer truncatum HOM05D005923 ORTHO05D007376 1.5e-217 760.0 645 61.1
ClCG11G012400 Citrullus lanatus HOM05D005923 ORTHO05D007376 9.7e-217 757.3 644 59.5
RcHm_v2.0_Chr3g0447491 Rosa chinensis HOM05D005923 ORTHO05D007376 1.3e-216 756.9 645 59.8
Ciclev10011172m.g Citrus clementina HOM05D005923 ORTHO05D007376 1.7e-216 756.5 649 58.9
MSTRG.27409 Avicennia marina HOM05D005923 ORTHO05D007376 2.2e-216 756.1 652 58.6
Sabra08G0057400 Salix brachista HOM05D005923 ORTHO05D007376 3.7e-216 755.4 648 60.5
CsaV3_2G010290 Cucumis sativus L. HOM05D005923 ORTHO05D007376 4.8e-216 755.0 644 58.9
Hund21927 Selenicereus undatus HOM05D005923 ORTHO05D007376 3.1e-215 752.3 642 60.6
Lalb_Chr03g0038141 Lupinus albus HOM05D005923 ORTHO05D007376 1.2e-214 750.4 649 60.1
Medtr7g080490 Medicago truncatula HOM05D005923 ORTHO05D007376 4.5e-214 748.4 651 59.8
Lj1g0007040 Lotus japonicus HOM05D005923 ORTHO05D007376 5.9e-214 748.0 645 59.2
TPR.G31231 Trifolium pratense HOM05D005923 ORTHO05D007376 5.9e-214 748.0 649 59.2
Cc09_g04040 Coffea canephora HOM05D005923 ORTHO05D007376 3.8e-213 745.3 608 62.7
CANSAT21G0310 Cannabis sativa HOM05D005923 ORTHO05D007376 6.5e-213 744.6 644 59.0
AUR62014468 Chenopodium quinoa HOM05D005923 ORTHO05D007376 2.5e-212 742.7 647 59.4
PGR031G2609 Punica granatum HOM05D005923 ORTHO05D007376 5.5e-212 741.5 647 59.5
Actinidia06787 Actinidia chinensis HOM05D005923 ORTHO05D007376 4.7e-211 738.4 650 58.8
Sed0021637 Sechium edule HOM05D005923 ORTHO05D007376 1.8e-210 736.5 644 58.1
ECA232G3428 Erigeron canadensis HOM05D005923 ORTHO05D007376 4.0e-210 735.3 644 58.4
Ca_08014_v3 Cicer arietinum L. HOM05D005923 ORTHO05D007376 5.2e-210 734.9 649 57.9
Phvul.008G051900 Phaseolus vulgaris HOM05D005923 ORTHO05D007376 5.2e-210 734.9 649 57.9
Glyma.18G244700 Glycine max HOM05D005923 ORTHO05D007376 1.1e-209 733.8 645 58.8
SalBow1G7804 Salvia bowleyana HOM05D005923 ORTHO05D007376 3.3e-209 732.3 643 57.4
Cpa.g.sc99.42 Carica papaya HOM05D005923 ORTHO05D007376 5.7e-209 731.5 644 59.3
FvH4_6g00140 Fragaria vesca HOM05D005923 ORTHO05D007376 5.7e-209 731.5 646 57.7
AUR62034530 Chenopodium quinoa HOM05D005923 ORTHO05D007376 1.3e-208 730.3 647 59.2
Psat3g105160 Pisum sativum HOM05D005923 ORTHO05D007376 4.8e-208 728.4 649 57.6
Sc16g0010600 Simmondsia chinensis HOM05D005923 ORTHO05D007376 8.2e-208 727.6 649 59.6
Sabra10G0138600 Salix brachista HOM05D005923 ORTHO05D007376 1.1e-207 727.2 707 55.2
PSO675G7036 Papaver somniferum HOM05D005923 ORTHO05D007376 1.8e-207 726.5 649 58.2
Solyc11g008570.2 Solanum lycopersicum HOM05D005923 ORTHO05D007376 2.4e-207 726.1 651 57.3
PSO732G0688 Papaver somniferum HOM05D005923 ORTHO05D007376 3.1e-207 725.7 649 57.8
GSVIVG01003759001 Vitis vinifera HOM05D005923 ORTHO05D007376 9.1e-207 724.2 643 60.2
EL10Ac4g10017 Beta vulgaris HOM05D005923 ORTHO05D007376 1.2e-206 723.8 646 58.7
arahy.Tifrunner.gnm1.ann1.VQ08NH Arachis hypogaea HOM05D005923 ORTHO05D007376 1.6e-206 723.4 666 56.3
Glyma.09G248100 Glycine max HOM05D005923 ORTHO05D007376 1.6e-206 723.4 645 58.0
Ah.04g159240 Amaranthus hybridus HOM05D005923 ORTHO05D007376 2.9e-205 719.2 646 59.6
MD12G1262500 Malus domestica HOM05D005923 ORTHO05D007376 2.9e-205 719.2 651 56.4
Eucgr.B01459 Eucalyptus grandis HOM05D005923 ORTHO05D007376 1.1e-204 717.2 645 57.4
VMungo1383G0851 Vigna mungo HOM05D005923 ORTHO05D007376 3.2e-204 715.7 649 56.9
Migut.F02096 Erythranthe guttata HOM05D005923 ORTHO05D007376 4.7e-203 711.8 646 56.2
Thhalv10020144m.g Eutrema salsugineum HOM05D005923 ORTHO05D007376 4.7e-203 711.8 645 56.1
Lsat_1_v5_gn_0_14641 Lactuca sativa HOM05D005923 ORTHO05D007376 1.4e-202 710.3 647 55.2
Aqoxy2G04094 Aquilegia oxysepala HOM05D005923 ORTHO05D007376 1.8e-202 709.9 650 57.1
AT3G03305 Arabidopsis thaliana HOM05D005923 ORTHO05D007376 3.0e-202 709.1 645 55.7
AL3G12930 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 6.8e-202 708.0 645 56.0
THA.LOC104827232 Tarenaya hassleriana HOM05D005923 ORTHO05D007376 8.8e-202 707.6 648 56.5
CARHR077340 Cardamine hirsuta HOM05D005923 ORTHO05D007376 1.3e-200 703.7 652 55.1
Carub.0003s0247 Capsella rubella HOM05D005923 ORTHO05D007376 3.7e-200 702.2 644 55.1
SGA_v2.0_scaffold62G21491 Striga asiatica HOM05D005923 ORTHO05D007376 8.3e-200 701.0 641 56.3
Prupe.6G364500 Prunus persica HOM05D005923 ORTHO05D007376 5.4e-199 698.4 609 59.3
Sp3g02330 Schrenkiella parvula HOM05D005923 ORTHO05D007376 5.4e-199 698.4 645 54.9
Aa31LG5G13800 Aethionema arabicum HOM05D005923 ORTHO05D000304 1.2e-198 697.2 630 55.9
arahy.Tifrunner.gnm1.ann1.51VLQD Arachis hypogaea HOM05D005923 ORTHO05D007376 5.0e-197 691.8 652 55.2
SalBow1G1244 Salvia bowleyana HOM05D005923 ORTHO05D007376 2.6e-193 679.5 607 57.0
C05p63470 Brassica napus HOM05D005923 ORTHO05D007376 3.4e-193 679.1 650 54.2
HanXRQChr10g0283011 Helianthus annuus HOM05D005923 ORTHO05D007376 5.7e-193 678.3 637 55.3
Thecc.05G188500 Theobroma cacao HOM05D005923 ORTHO05D007376 5.7e-193 678.3 523 64.4
BolC5t35012H Brassica oleracea HOM05D005923 ORTHO05D007376 9.8e-193 677.6 656 53.7
MBI08_g20603_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 3.7e-192 675.6 653 55.4
BraA05t23125Z Brassica rapa HOM05D005923 ORTHO05D007376 8.3e-192 674.5 654 52.9
A05p43880 Brassica napus HOM05D005923 ORTHO05D007376 1.1e-191 674.1 648 53.4
Lj8A198T52 Lonicera japonica HOM05D005923 ORTHO05D007376 1.9e-180 636.7 650 55.5
Gohir.A02G106500 Gossypium hirsutum HOM05D005923 ORTHO05D007376 1.6e-179 633.6 549 60.1
HPP92_013562 Vanilla planifolia HOM05D005923 ORTHO05D007376 1.9e-175 620.2 660 50.5
Os01g0894000 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 2.7e-174 616.3 655 49.6
Zm00001eb144980 Zea mays HOM05D005923 ORTHO05D007376 4.3e-172 609.0 653 49.2
ATR0824G241 Amborella trichopoda HOM05D005923 ORTHO05D007376 3.9e-165 585.9 657 48.7
Nitab4.5_0009631g0020 Nicotiana tabacum HOM05D005923 ORTHO05D007376 2.8e-163 579.7 652 50.6
unitig_46.g18570 Utricularia gibba HOM05D005923 ORTHO05D007376 8.4e-160 568.2 659 46.9
Ah.06g195310 Amaranthus hybridus HOM05D005923 ORTHO05D007376 2.9e-152 543.1 523 55.1
BcaC05g30305 Brassica carinata HOM05D000399 ORTHO05D000304 4.9e-152 542.3 628 47.9
Os07g0274100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 2.1e-150 537.0 654 45.0
CDE09G0389 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 3.8e-136 489.6 420 60.2
MELO3C008611.2 Cucumis melo HOM05D005923 ORTHO05D007376 1.1e-114 418.3 302 68.5
vmacro19542 Vaccinium macrocarpon HOM05D005923 ORTHO05D007376 1.1e-111 408.3 364 55.2
Atru.chr12.1657 Acer truncatum HOM05D005923 ORTHO05D007376 2.5e-111 407.1 422 53.1
arahy.Tifrunner.gnm1.ann1.25XALN Arachis hypogaea HOM05D005923 ORTHO05D007376 5.9e-105 386.0 436 49.3
SMO228G0200 Selaginella moellendorffii HOM05D005923 ORTHO05D007376 2.1e-102 377.5 626 38.2
MBI12_g21502_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 2.7e-102 377.1 666 34.4
AagrBONN_evm.TU.Sc2ySwM_344.5471 Anthoceros agrestis HOM05D005923 ORTHO05D007376 2.6e-97 360.5 676 35.8
Mapoly0048s0028 Marchantia polymorpha HOM05D005923 ORTHO05D007376 5.9e-97 359.4 724 34.4
ATR0564G177 Amborella trichopoda HOM05D005923 ORTHO05D007376 8.0e-94 349.0 621 35.3
HPP92_028167 Vanilla planifolia HOM05D005923 ORTHO05D007376 1.0e-93 348.6 649 34.2
Nn013s41460 Nelumbo nucifera HOM05D005923 ORTHO05D007376 4.0e-93 346.7 336 55.1
Pp3c8_13610 Physcomitrium patens HOM05D005923 ORTHO05D007376 2.8e-83 313.9 715 33.0
Pp3c23_21040 Physcomitrium patens HOM05D005923 ORTHO05D007376 2.7e-81 307.4 691 32.6
MD04G1248100 Malus domestica HOM05D005923 ORTHO05D007376 1.3e-75 288.5 335 48.4
Actinidia06786 Actinidia chinensis HOM05D005923 ORTHO05D007376 3.3e-71 273.9 290 54.5
Zm00001eb398210 Zea mays HOM05D005923 ORTHO05D007376 4.6e-65 253.4 558 33.2
CDE06G0114 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 4.6e-57 226.9 322 39.8
Atru.chr12.1696 Acer truncatum HOM05D005923 ORTHO05D007376 7.5e-52 209.5 190 55.3
Atru.chr12.1695 Acer truncatum HOM05D005923 ORTHO05D007376 2.5e-47 194.5 179 58.1
MD04G1248200 Malus domestica HOM05D005923 ORTHO05D007376 3.2e-42 177.6 165 55.2
Pp3c20_18430 Physcomitrium patens HOM05D005923 ORTHO05D007376 5.6e-39 166.8 491 31.4
Atru.chr12.1663 Acer truncatum HOM05D005923 ORTHO05D007376 3.4e-28 131.0 83 73.5
Atru.chr12.1656 Acer truncatum HOM05D005923 ORTHO05D007376 2.2e-27 128.3 125 54.4
Nn1g09626 Nelumbo nucifera HOM05D005923 ORTHO05D007376 4.2e-26 124.0 83 69.9
CDE02G4030 Ceratophyllum demersum HOM05D005923 ORTHO05D000203 1.0e-24 119.4 103 53.4
AL3G13260 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 5.8e-20 103.6 75 60.0
Nitab4.5_0001853g0060 Nicotiana tabacum HOM05D005923 ORTHO05D007376 4.6e-17 94.0 78 55.1
Nitab4.5_0001853g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 4.6e-17 94.0 78 55.1
Os03g0260100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 5.3e-13 80.5 83 41.0
Ciclev10013254m.g Citrus clementina HOM05D005923 ORTHO05D007376 7.9e-09 66.6 103 40.8
Cre11.g478456 Chlamydomonas reinhardtii HOM05D005923 ORTHO05D007376 8.7e-08 63.2 333 22.5
SMO335G0023 Selaginella moellendorffii HOM05D047118 ORTHO05D007376 8.7e-08 63.2 131 35.9


User provided reference genes

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