Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031513 Daucus carota HOM05D006742 ORTHO05D008755 4.9e-207 724.2 346 100.0
Actinidia05928 Actinidia chinensis HOM05D006742 ORTHO05D008755 1.2e-40 171.4 342 33.0
Lj7C532G3 Lonicera japonica HOM05D006742 ORTHO05D008755 1.3e-34 151.4 334 29.3
Cpa.g.sc130.16 Carica papaya HOM05D008753 ORTHO05D010999 2.1e-29 134.0 337 28.8
Cpa.g.sc130.19 Carica papaya HOM05D008753 ORTHO05D010999 5.8e-27 125.9 350 26.3
Cpa.g.sc130.17 Carica papaya HOM05D006742 ORTHO05D008755 7.6e-27 125.6 352 28.1
GSVIVG01001831001 Vitis vinifera HOM05D006742 ORTHO05D008755 4.9e-26 122.9 297 26.9
Lsat_1_v5_gn_4_43641 Lactuca sativa HOM05D006742 ORTHO05D008755 1.1e-25 121.7 343 25.9
Duzib264G0176 Durio zibethinus HOM05D006742 ORTHO05D008755 2.5e-25 120.6 347 27.4
Lsat_1_v5_gn_7_41620 Lactuca sativa HOM05D006742 ORTHO05D008755 1.2e-24 118.2 346 26.3
Lsat_1_v5_gn_7_8020 Lactuca sativa HOM05D006742 ORTHO05D008755 3.0e-23 113.6 346 25.1
Lsat_1_v5_gn_7_60861 Lactuca sativa HOM05D006742 ORTHO05D008755 6.7e-23 112.5 182 34.1
Lsat_1_v5_gn_5_78081 Lactuca sativa HOM05D006742 ORTHO05D008755 1.5e-22 111.3 349 24.6
Lsat_1_v5_gn_2_26181 Lactuca sativa HOM05D006742 ORTHO05D008755 1.9e-22 110.9 288 26.4
Lsat_1_v5_gn_4_45700 Lactuca sativa HOM05D006742 ORTHO05D008755 1.9e-22 110.9 275 26.2
Cpa.g.sc130.20 Carica papaya HOM05D008753 ORTHO05D010999 2.5e-22 110.5 357 25.2
Lsat_1_v5_gn_4_42761 Lactuca sativa HOM05D006742 ORTHO05D008755 4.3e-22 109.8 337 23.7
Lsat_1_v5_gn_4_42841 Lactuca sativa HOM05D006742 ORTHO05D008755 5.7e-22 109.4 290 25.9
QL02p078640 Quercus lobata HOM05D006742 ORTHO05D008755 5.7e-22 109.4 315 27.0
Lsat_1_v5_gn_4_43561 Lactuca sativa HOM05D006742 ORTHO05D008755 1.3e-21 108.2 348 26.1
Lsat_1_v5_gn_7_41520 Lactuca sativa HOM05D006742 ORTHO05D008755 1.3e-21 108.2 336 24.7
Lsat_1_v5_gn_7_41720 Lactuca sativa HOM05D006742 ORTHO05D008755 1.6e-21 107.8 347 25.9
QL02p078611 Quercus lobata HOM05D006742 ORTHO05D008755 2.2e-21 107.5 320 24.7
HanXRQChr09g0245641 Helianthus annuus HOM05D006742 ORTHO05D008755 2.8e-21 107.1 334 26.3
Lsat_1_v5_gn_7_41660 Lactuca sativa HOM05D006742 ORTHO05D008755 3.7e-21 106.7 338 26.3
TPR.G35632 Trifolium pratense HOM05D000002 ORTHO05D000001 3.7e-21 106.7 346 25.1
Lsat_1_v5_gn_7_41680 Lactuca sativa HOM05D006742 ORTHO05D008755 6.3e-21 105.9 286 26.9
Lsat_1_v5_gn_4_45640 Lactuca sativa HOM05D006742 ORTHO05D008755 1.1e-20 105.1 347 24.5
Medtr6g023220 Medicago truncatula HOM05D008753 ORTHO05D010999 1.1e-20 105.1 337 25.2
Lj7C533T3 Lonicera japonica HOM05D006742 ORTHO05D008755 1.8e-20 104.4 299 27.1
Lsat_1_v5_gn_7_41760 Lactuca sativa HOM05D006742 ORTHO05D008755 2.4e-20 104.0 275 25.8
Lsat_1_v5_gn_5_77921 Lactuca sativa HOM05D006742 ORTHO05D008755 3.1e-20 103.6 290 27.6
Lsat_1_v5_gn_4_41121 Lactuca sativa HOM05D006742 ORTHO05D008755 1.2e-19 101.7 305 25.2
Lsat_1_v5_gn_4_45140 Lactuca sativa HOM05D006742 ORTHO05D008755 1.5e-19 101.3 281 26.7
Lsat_1_v5_gn_4_45581 Lactuca sativa HOM05D006742 ORTHO05D008755 1.5e-19 101.3 355 23.1
QL02p078607 Quercus lobata HOM05D006742 ORTHO05D008755 1.5e-19 101.3 350 24.0
QL02p078713 Quercus lobata HOM05D006742 ORTHO05D008755 1.5e-19 101.3 329 25.2
COL.COLO4_08771 Corchorus olitorius HOM05D006742 ORTHO05D008755 2.0e-19 100.9 365 25.2
Lsat_1_v5_gn_2_25900 Lactuca sativa HOM05D006742 ORTHO05D008755 2.6e-19 100.5 295 27.8
Lsat_1_v5_gn_2_26520 Lactuca sativa HOM05D006742 ORTHO05D008755 3.4e-19 100.1 348 24.4
Lsat_1_v5_gn_4_42801 Lactuca sativa HOM05D006742 ORTHO05D008755 4.5e-19 99.8 187 31.6
Lsat_1_v5_gn_4_45300 Lactuca sativa HOM05D006742 ORTHO05D008755 7.7e-19 99.0 190 30.0
Lsat_1_v5_gn_7_96981 Lactuca sativa HOM05D006742 ORTHO05D008755 2.2e-18 97.4 289 24.6
Lsat_1_v5_gn_4_41141 Lactuca sativa HOM05D006742 ORTHO05D008755 2.9e-18 97.1 185 31.4
Lsat_1_v5_gn_7_97001 Lactuca sativa HOM05D006742 ORTHO05D008755 5.0e-18 96.3 277 26.0
HanXRQChr16g0519781 Helianthus annuus HOM05D006742 ORTHO05D008755 6.5e-18 95.9 347 24.8
Lsat_1_v5_gn_2_26061 Lactuca sativa HOM05D006742 ORTHO05D008755 8.5e-18 95.5 288 25.7
COL.COLO4_08775 Corchorus olitorius HOM05D006742 ORTHO05D008755 1.1e-17 95.1 264 28.4
Lsat_1_v5_gn_4_45120 Lactuca sativa HOM05D006742 ORTHO05D008755 1.4e-17 94.7 290 25.5
Lsat_1_v5_gn_4_42821 Lactuca sativa HOM05D006742 ORTHO05D008755 2.5e-17 94.0 187 29.9
Lsat_1_v5_gn_4_44980 Lactuca sativa HOM05D006742 ORTHO05D008755 4.2e-17 93.2 187 27.3
Lsat_1_v5_gn_7_41940 Lactuca sativa HOM05D006742 ORTHO05D008755 4.2e-17 93.2 371 24.3
Lsat_1_v5_gn_7_16060 Lactuca sativa HOM05D006742 ORTHO05D008755 5.5e-17 92.8 149 30.2
Medtr4g133490 Medicago truncatula HOM05D008753 ORTHO05D010999 9.4e-17 92.0 327 25.4
Lsat_1_v5_gn_2_25941 Lactuca sativa HOM05D006742 ORTHO05D008755 2.1e-16 90.9 292 26.4
COL.COLO4_08779 Corchorus olitorius HOM05D006742 ORTHO05D008755 2.7e-16 90.5 267 27.7
Lsat_1_v5_gn_4_45220 Lactuca sativa HOM05D006742 ORTHO05D008755 2.7e-16 90.5 192 26.0
HanXRQChr16g0520041 Helianthus annuus HOM05D006742 ORTHO05D008755 4.6e-16 89.7 190 31.1
HanXRQChr16g0520091 Helianthus annuus HOM05D006742 ORTHO05D008755 4.6e-16 89.7 190 31.1
Lsat_1_v5_gn_2_26041 Lactuca sativa HOM05D006742 ORTHO05D008755 6.1e-16 89.4 268 25.4
Lalb_Chr19g0124261 Lupinus albus HOM05D008753 ORTHO05D010999 7.9e-16 89.0 348 22.7
Lsat_1_v5_gn_2_26101 Lactuca sativa HOM05D006742 ORTHO05D008755 1.0e-15 88.6 286 26.6
HanXRQChr16g0520101 Helianthus annuus HOM05D006742 ORTHO05D008755 1.4e-15 88.2 190 30.5
Lsat_1_v5_gn_2_26361 Lactuca sativa HOM05D006742 ORTHO05D008755 1.4e-15 88.2 287 22.6
Lsat_1_v5_gn_2_25961 Lactuca sativa HOM05D006742 ORTHO05D008755 3.0e-15 87.0 264 26.1
Lsat_1_v5_gn_5_69760 Lactuca sativa HOM05D000451 ORTHO05D000351 3.0e-15 87.0 259 27.4
Lsat_1_v5_gn_5_78141 Lactuca sativa HOM05D006742 ORTHO05D008755 3.0e-15 87.0 178 29.2
Lsat_1_v5_gn_2_26121 Lactuca sativa HOM05D006742 ORTHO05D008755 5.1e-15 86.3 293 25.9
Lsat_1_v5_gn_4_180081 Lactuca sativa HOM05D006742 ORTHO05D008755 6.7e-15 85.9 185 26.5
Lsat_1_v5_gn_4_41101 Lactuca sativa HOM05D006742 ORTHO05D008755 2.0e-14 84.3 279 24.7
Psat5g232360 Pisum sativum HOM05D008753 ORTHO05D010999 2.5e-14 84.0 314 24.5
Lsat_1_v5_gn_2_26580 Lactuca sativa HOM05D006742 ORTHO05D008755 3.3e-14 83.6 156 29.5
Lsat_1_v5_gn_7_98080 Lactuca sativa HOM05D006742 ORTHO05D008755 3.3e-14 83.6 190 26.8
Lalb_Chr03g0043461 Lupinus albus HOM05D008753 ORTHO05D010999 9.7e-14 82.0 311 23.8
Medtr3g006140 Medicago truncatula HOM05D008753 ORTHO05D010999 9.7e-14 82.0 306 25.2
Lsat_1_v5_gn_7_28681 Lactuca sativa HOM05D006742 ORTHO05D008755 2.8e-13 80.5 189 27.5
Medtr3g006120 Medicago truncatula HOM05D008753 ORTHO05D010999 2.8e-13 80.5 306 26.5
Medtr7g070100 Medicago truncatula HOM05D008753 ORTHO05D010999 2.8e-13 80.5 337 24.3
Lsat_1_v5_gn_4_43681 Lactuca sativa HOM05D006742 ORTHO05D008755 4.8e-13 79.7 160 28.8
Medtr3g045700 Medicago truncatula HOM05D008753 ORTHO05D010999 6.3e-13 79.3 299 25.8
HanXRQChr16g0519811 Helianthus annuus HOM05D006742 ORTHO05D008755 8.2e-13 79.0 289 23.5
Lsat_1_v5_gn_4_44960 Lactuca sativa HOM05D006742 ORTHO05D008755 8.2e-13 79.0 299 24.4
Medtr3g006100 Medicago truncatula HOM05D008753 ORTHO05D010999 8.2e-13 79.0 338 24.6
HanXRQChr16g0519851 Helianthus annuus HOM05D006742 ORTHO05D008755 1.8e-12 77.8 308 23.4
Lsat_1_v5_gn_7_7980 Lactuca sativa HOM05D006742 ORTHO05D008755 2.4e-12 77.4 345 22.3
Medtr3g006180 Medicago truncatula HOM05D008753 ORTHO05D010999 2.4e-12 77.4 308 26.3
Lsat_1_v5_gn_5_74560 Lactuca sativa HOM05D006742 ORTHO05D008755 5.3e-12 76.3 191 24.1
Medtr4g133320 Medicago truncatula HOM05D008753 ORTHO05D010999 9.1e-12 75.5 307 24.4
Lsat_1_v5_gn_5_74540 Lactuca sativa HOM05D006742 ORTHO05D008755 1.2e-11 75.1 198 23.2
Lsat_1_v5_gn_7_97461 Lactuca sativa HOM05D006742 ORTHO05D008755 1.2e-11 75.1 285 23.2
Lsat_1_v5_gn_7_98060 Lactuca sativa HOM05D006742 ORTHO05D008755 1.5e-11 74.7 191 28.3
COL.COLO4_08776 Corchorus olitorius HOM05D006742 ORTHO05D008755 2.0e-11 74.3 271 25.1
Lsat_1_v5_gn_7_97640 Lactuca sativa HOM05D006742 ORTHO05D008755 1.3e-10 71.6 184 27.2
Lsat_1_v5_gn_6_15581 Lactuca sativa HOM05D006742 ORTHO05D008755 1.7e-10 71.2 109 33.9
Lsat_1_v5_gn_2_28161 Lactuca sativa HOM05D006742 ORTHO05D008755 2.9e-10 70.5 324 24.1
Lsat_1_v5_gn_7_77380 Lactuca sativa HOM05D006742 ORTHO05D008755 5.0e-10 69.7 105 34.3
Lj7P532T40 Lonicera japonica HOM05D006742 ORTHO05D008755 5.0e-10 69.7 86 43.0
CSS0034097 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.9e-09 67.8 328 22.6
TWI34G1020 Tripterygium wilfordii HOM05D008995 ORTHO05D000074 1.9e-09 67.8 302 22.5
Lsat_1_v5_gn_2_26421 Lactuca sativa HOM05D006742 ORTHO05D008755 7.9e-08 62.4 159 26.4
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.1e-07 59.7 300 22.0
QL02p078918 Quercus lobata HOM05D006742 ORTHO05D008755 1.1e-06 58.5 108 31.5
Lsat_1_v5_gn_4_45660 Lactuca sativa HOM05D006742 ORTHO05D008755 2.6e-06 57.4 127 27.6


User provided reference genes

Program Settings