Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031495 Daucus carota HOM05D011721 ORTHO05D013592 1.0e-295 1019.2 491 100.0
DCAR_028487 Daucus carota HOM05D011721 ORTHO05D013592 4.5e-291 1003.8 491 98.4
DCAR_023735 Daucus carota HOM05D011721 ORTHO05D013592 1.1e-273 946.0 468 97.9
DCAR_028155 Daucus carota HOM05D011721 ORTHO05D013592 1.1e-249 866.3 436 96.1
DCAR_017394 Daucus carota HOM05D011721 ORTHO05D013592 4.3e-217 758.1 436 85.3
DCAR_004177 Daucus carota HOM05D011721 ORTHO05D013592 2.4e-215 752.3 465 82.8
DCAR_031486 Daucus carota HOM05D011721 ORTHO05D013592 9.0e-215 750.4 519 74.6
DCAR_000926 Daucus carota HOM05D011721 ORTHO05D013592 2.2e-213 745.7 476 79.0
DCAR_017844 Daucus carota HOM05D011721 ORTHO05D013592 9.3e-212 740.3 436 85.3
DCAR_017273 Daucus carota HOM05D011721 ORTHO05D013592 5.4e-151 538.5 423 64.8
DCAR_021122 Daucus carota HOM05D011721 ORTHO05D013592 2.3e-141 506.5 254 99.2
DCAR_021121 Daucus carota HOM05D011721 ORTHO05D013592 2.5e-68 263.8 131 99.2
DCAR_025269 Daucus carota HOM05D011721 ORTHO05D013592 1.9e-63 247.7 241 58.9
DCAR_028482 Daucus carota HOM05D011721 ORTHO05D013592 4.8e-51 206.5 141 76.6
DCAR_010969 Daucus carota HOM05D011721 ORTHO05D013592 1.1e-31 142.1 110 68.2
DCAR_008891 Daucus carota HOM05D000124 ORTHO05D013592 3.5e-17 94.0 85 61.2
DCAR_017306 Daucus carota HOM05D011721 ORTHO05D013592 7.8e-17 92.8 172 43.6
Haze_13472 Corylus avellana HOM05D000176 ORTHO05D000106 6.2e-14 83.2 221 28.1
RhsimUnG0046100 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.5e-12 78.6 184 29.9
Migut.M01636 Erythranthe guttata HOM05D000176 ORTHO05D000106 2.0e-12 78.2 220 29.1
QL05p088783 Quercus lobata HOM05D000176 ORTHO05D000106 2.6e-12 77.8 192 31.2
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 4.4e-12 77.0 195 30.8
QL10p063859 Quercus lobata HOM05D000176 ORTHO05D000106 5.8e-12 76.6 192 30.7
Sopen01g011760 Solanum pennellii HOM05D000176 ORTHO05D000106 5.8e-12 76.6 197 31.0
Solyc04g150170.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.5e-12 76.3 195 30.8
Sopen01g034990 Solanum pennellii HOM05D000176 ORTHO05D000106 7.5e-12 76.3 230 29.6
Sopen03g022250 Solanum pennellii HOM05D000176 ORTHO05D000106 7.5e-12 76.3 230 29.6
Sopen04g029940 Solanum pennellii HOM05D000176 ORTHO05D000106 7.5e-12 76.3 230 29.6
Sopen09g029870 Solanum pennellii HOM05D000176 ORTHO05D000106 7.5e-12 76.3 230 29.6
Sopen12g008340 Solanum pennellii HOM05D000176 ORTHO05D000106 7.5e-12 76.3 230 29.6
QL05p044352 Quercus lobata HOM05D000176 ORTHO05D000106 9.8e-12 75.9 192 30.7
Rhsim01G0238100 Rhododendron simsii HOM05D000176 ORTHO05D000106 9.8e-12 75.9 183 30.6
Solyc03g005550.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.8e-12 75.9 197 31.0
Solyc07g044815.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.8e-12 75.9 226 29.2
Solyc10g008267.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.8e-12 75.9 197 31.0
MSTRG.12876 Avicennia marina HOM05D000176 ORTHO05D000106 1.3e-11 75.5 194 28.9
Rhsim06G0170700 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.7e-11 75.1 237 28.3
Solyc01g081584.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.7e-11 75.1 230 29.1
CsaV3_5G015580 Cucumis sativus L. HOM05D000176 ORTHO05D000106 2.2e-11 74.7 277 26.4
Lalb_Chr01g0015401 Lupinus albus HOM05D000176 ORTHO05D000106 6.4e-11 73.2 187 29.9
Oeu017988.1 Olea europaea HOM05D000176 ORTHO05D000106 6.4e-11 73.2 220 26.4
QL08p006787 Quercus lobata HOM05D000176 ORTHO05D000106 6.4e-11 73.2 192 30.2
QL10p058009 Quercus lobata HOM05D000176 ORTHO05D000106 6.4e-11 73.2 192 30.2
Lalb_Chr01g0019781 Lupinus albus HOM05D000176 ORTHO05D000106 8.3e-11 72.8 136 38.2
QL04p015528 Quercus lobata HOM05D000176 ORTHO05D000106 8.3e-11 72.8 192 30.2
QL07p012019 Quercus lobata HOM05D000176 ORTHO05D000106 8.3e-11 72.8 192 30.2
QL08p003348 Quercus lobata HOM05D000176 ORTHO05D000106 8.3e-11 72.8 192 30.2
QL08p007762 Quercus lobata HOM05D000176 ORTHO05D000106 8.3e-11 72.8 192 30.2
PGSC0003DMG400034839 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.4e-10 72.0 195 29.7
CSS0021846 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.9e-10 71.6 256 28.1
MELO3C022946.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.9e-10 71.6 246 26.8
Rhsim13G0134200 Rhododendron simsii HOM05D000176 ORTHO05D000106 2.4e-10 71.2 185 30.3
RhsimUnG0177100 Rhododendron simsii HOM05D000176 ORTHO05D000106 2.4e-10 71.2 185 30.3
Oeu049412.1 Olea europaea HOM05D000176 ORTHO05D000106 3.2e-10 70.9 189 28.6
CSS0044124 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-10 70.5 230 28.7
PGSC0003DMG400029935 Solanum tuberosum HOM05D000176 ORTHO05D000106 4.1e-10 70.5 163 31.9
Cc10_g12350 Coffea canephora HOM05D000176 ORTHO05D000106 5.4e-10 70.1 192 28.1
arahy.Tifrunner.gnm1.ann1.B6LYB4 Arachis hypogaea HOM05D000176 ORTHO05D000106 7.1e-10 69.7 184 31.0
Oeu049415.1 Olea europaea HOM05D000176 ORTHO05D000106 7.1e-10 69.7 185 28.6
Sopen12g002060 Solanum pennellii HOM05D000176 ORTHO05D003511 7.1e-10 69.7 198 27.3
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 1.2e-09 68.9 189 27.5
Solyc12g006100.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.2e-09 68.9 196 27.6
arahy.Tifrunner.gnm1.ann1.M3TN6X Arachis hypogaea HOM05D000176 ORTHO05D000106 1.6e-09 68.6 178 28.7
MSTRG.13026 Avicennia marina HOM05D000176 ORTHO05D000106 1.6e-09 68.6 224 28.6
QL01p018788 Quercus lobata HOM05D000176 ORTHO05D000106 1.6e-09 68.6 194 27.3
DCAR_030358 Daucus carota HOM05D000176 ORTHO05D000106 2.1e-09 68.2 265 27.5
QL04p066053 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-09 68.2 196 31.6
QL04p089247 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-09 68.2 196 31.6
QL05p078397 Quercus lobata HOM05D000070 ORTHO05D000106 2.1e-09 68.2 196 32.1
QL12p031843 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-09 68.2 196 31.6
QL93p0164_0014 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-09 68.2 196 31.6
PGSC0003DMG402028807 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.1e-09 68.2 212 28.3
QL93p2017_0003 Quercus lobata HOM05D000176 ORTHO05D000106 2.7e-09 67.8 229 31.4
CSS0045961 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.5e-09 67.4 230 28.3
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 3.5e-09 67.4 197 29.9
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 6.0e-09 66.6 199 33.2
arahy.Tifrunner.gnm1.ann1.N6NQQH Arachis hypogaea HOM05D000176 ORTHO05D000106 7.8e-09 66.2 148 34.5
MSTRG.24105 Avicennia marina HOM05D000176 ORTHO05D000106 7.8e-09 66.2 134 31.3
CSS0025783 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.8e-09 66.2 230 28.3
CSS0037304 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.8e-09 66.2 230 28.3
QL03p030217 Quercus lobata HOM05D000176 ORTHO05D000106 1.0e-08 65.9 196 30.1
arahy.Tifrunner.gnm1.ann1.UGFV7M Arachis hypogaea HOM05D000176 ORTHO05D000106 1.3e-08 65.5 179 28.5
EL10Ac4g07855 Beta vulgaris HOM05D001371 ORTHO05D001319 1.3e-08 65.5 174 30.5
QL12p004084 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-08 65.5 200 28.5
QL01p023632 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-08 65.1 190 30.5
QL09p009005 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-08 65.1 200 29.0
QL12p023375 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-08 65.1 196 31.6
arahy.Tifrunner.gnm1.ann1.I3FH3V Arachis hypogaea HOM05D000176 ORTHO05D000106 2.3e-08 64.7 180 30.6
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 2.3e-08 64.7 259 27.0
Sopen12g022270 Solanum pennellii HOM05D000006 ORTHO05D000001 2.3e-08 64.7 279 25.4
TWI79G1140 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 2.3e-08 64.7 240 27.5
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 3.0e-08 64.3 197 29.9
QL93p0869_0056 Quercus lobata HOM05D000176 ORTHO05D000106 3.0e-08 64.3 196 31.6
Solyc05g024385.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.0e-08 64.3 134 34.3
CSS0007867 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.9e-08 63.9 223 26.9
CSS0043966 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.9e-08 63.9 184 28.8
QL02p053683 Quercus lobata HOM05D000176 ORTHO05D000106 3.9e-08 63.9 196 29.1
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 3.9e-08 63.9 196 30.1
QL09p008289 Quercus lobata HOM05D001043 ORTHO05D000106 3.9e-08 63.9 199 32.7
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 3.9e-08 63.9 196 30.1
arahy.Tifrunner.gnm1.ann1.X9EH9C Arachis hypogaea HOM05D000176 ORTHO05D000106 5.1e-08 63.5 178 27.5
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.1e-08 63.5 223 26.5
QL07p004315 Quercus lobata HOM05D000176 ORTHO05D000106 5.1e-08 63.5 200 29.0
QL08p003473 Quercus lobata HOM05D000176 ORTHO05D005465 5.1e-08 63.5 200 28.5
QL93p0107_0380 Quercus lobata HOM05D000370 ORTHO05D001335 5.1e-08 63.5 200 29.0
Rhsim10G0041500 Rhododendron simsii HOM05D000176 ORTHO05D000106 5.1e-08 63.5 185 27.6
arahy.Tifrunner.gnm1.ann1.X7AT2Z Arachis hypogaea HOM05D000176 ORTHO05D000106 6.6e-08 63.2 146 30.8
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 6.6e-08 63.2 188 30.9
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.6e-08 63.2 224 26.8
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.6e-08 63.2 224 26.8
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.6e-08 62.8 223 26.5
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.6e-08 62.8 223 26.5
CSS0036437 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.6e-08 62.8 223 25.6
arahy.Tifrunner.gnm1.ann1.909AJ0 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.1e-07 62.4 159 30.8
arahy.Tifrunner.gnm1.ann1.UC970J Arachis hypogaea HOM05D000176 ORTHO05D000106 1.1e-07 62.4 120 35.8
Cc01_g16020 Coffea canephora HOM05D000176 ORTHO05D000106 1.1e-07 62.4 230 26.5
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-07 62.4 163 31.3
Sopen01g009560 Solanum pennellii HOM05D000176 ORTHO05D000695 1.1e-07 62.4 167 30.5
arahy.Tifrunner.gnm1.ann1.35HGX8 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.5e-07 62.0 140 30.7
arahy.Tifrunner.gnm1.ann1.71UM9A Arachis hypogaea HOM05D000176 ORTHO05D000106 1.9e-07 61.6 178 27.5
arahy.Tifrunner.gnm1.ann1.TQC5S0 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.9e-07 61.6 122 36.9
QL02p018295 Quercus lobata HOM05D000176 ORTHO05D000106 1.9e-07 61.6 191 30.4
QL11p043362 Quercus lobata HOM05D000176 ORTHO05D000106 1.9e-07 61.6 191 30.4
Rhsim03G0028500 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.9e-07 61.6 243 26.7
arahy.Tifrunner.gnm1.ann1.5C13H3 Arachis hypogaea HOM05D000176 ORTHO05D000106 2.5e-07 61.2 163 26.4
Ca_07377_v3 Cicer arietinum L. HOM05D000176 ORTHO05D012663 2.5e-07 61.2 181 30.4
arahy.Tifrunner.gnm1.ann1.6F6EX1 Arachis hypogaea HOM05D000176 ORTHO05D000106 3.3e-07 60.8 176 31.2
arahy.Tifrunner.gnm1.ann1.MR5L7T Arachis hypogaea HOM05D000176 ORTHO05D000106 3.3e-07 60.8 193 28.0
QL05p088131 Quercus lobata HOM05D000176 ORTHO05D000106 3.3e-07 60.8 190 29.5
QL06p043010 Quercus lobata HOM05D000529 ORTHO05D000472 3.3e-07 60.8 190 29.5
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 3.3e-07 60.8 190 29.5
arahy.Tifrunner.gnm1.ann1.4BA5MX Arachis hypogaea HOM05D000176 ORTHO05D000106 5.6e-07 60.1 117 35.9
arahy.Tifrunner.gnm1.ann1.FK3FR0 Arachis hypogaea HOM05D000176 ORTHO05D000106 5.6e-07 60.1 178 28.7
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.6e-07 60.1 187 27.8
arahy.Tifrunner.gnm1.ann1.7K8IWY Arachis hypogaea HOM05D000176 ORTHO05D000106 7.3e-07 59.7 178 27.0
arahy.Tifrunner.gnm1.ann1.918IDM Arachis hypogaea HOM05D000176 ORTHO05D000106 7.3e-07 59.7 147 32.0
arahy.Tifrunner.gnm1.ann1.809MA2 Arachis hypogaea HOM05D000176 ORTHO05D000106 9.5e-07 59.3 132 35.6
QL06p040368 Quercus lobata HOM05D000176 ORTHO05D000106 9.5e-07 59.3 167 32.3
arahy.Tifrunner.gnm1.ann1.1V5N1T Arachis hypogaea HOM05D000176 ORTHO05D000106 1.2e-06 58.9 145 33.1
arahy.Tifrunner.gnm1.ann1.4Y9FB5 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.2e-06 58.9 137 28.5
arahy.Tifrunner.gnm1.ann1.RHK7YZ Arachis hypogaea HOM05D000176 ORTHO05D000106 1.2e-06 58.9 163 29.4
arahy.Tifrunner.gnm1.ann1.I7F1GK Arachis hypogaea HOM05D000176 ORTHO05D000106 1.6e-06 58.5 137 29.9
arahy.Tifrunner.gnm1.ann1.XWFJ2F Arachis hypogaea HOM05D000176 ORTHO05D000106 1.6e-06 58.5 182 28.0
QL09p040375 Quercus lobata HOM05D000176 ORTHO05D000106 1.6e-06 58.5 192 28.6
SHI45281 Sapria himalayana HOM05D000176 ORTHO05D000106 1.6e-06 58.5 135 32.6
PGSC0003DMG400010948 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.6e-06 58.5 134 32.1
arahy.Tifrunner.gnm1.ann1.594H2I Arachis hypogaea HOM05D000176 ORTHO05D000106 2.1e-06 58.2 173 27.2
arahy.Tifrunner.gnm1.ann1.I44X7U Arachis hypogaea HOM05D000176 ORTHO05D000106 2.1e-06 58.2 146 30.1
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 2.1e-06 58.2 163 28.8
QL05p048284 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-06 58.2 116 32.8
arahy.Tifrunner.gnm1.ann1.1F444R Arachis hypogaea HOM05D000176 ORTHO05D000106 2.8e-06 57.8 181 28.2
arahy.Tifrunner.gnm1.ann1.2EXG5E Arachis hypogaea HOM05D000176 ORTHO05D000106 2.8e-06 57.8 181 28.2
arahy.Tifrunner.gnm1.ann1.E098MH Arachis hypogaea HOM05D000176 ORTHO05D000106 2.8e-06 57.8 137 28.5
arahy.Tifrunner.gnm1.ann1.YGZP4V Arachis hypogaea HOM05D000176 ORTHO05D000106 2.8e-06 57.8 181 28.2
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-06 57.8 162 29.6
arahy.Tifrunner.gnm1.ann1.19MM8B Arachis hypogaea HOM05D000176 ORTHO05D000106 3.6e-06 57.4 137 28.5
arahy.Tifrunner.gnm1.ann1.F275S5 Arachis hypogaea HOM05D000176 ORTHO05D000106 3.6e-06 57.4 137 28.5
arahy.Tifrunner.gnm1.ann1.U08PDC Arachis hypogaea HOM05D000176 ORTHO05D000106 3.6e-06 57.4 137 28.5
ECA233G5665 Erigeron canadensis HOM05D000176 ORTHO05D000106 3.6e-06 57.4 192 27.6
Solyc05g025605.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.6e-06 57.4 118 33.1
arahy.Tifrunner.gnm1.ann1.841NM0 Arachis hypogaea HOM05D000176 ORTHO05D000106 4.7e-06 57.0 137 28.5
arahy.Tifrunner.gnm1.ann1.EGIR32 Arachis hypogaea HOM05D000176 ORTHO05D000106 4.7e-06 57.0 206 26.2
arahy.Tifrunner.gnm1.ann1.F5WZGD Arachis hypogaea HOM05D000176 ORTHO05D000106 4.7e-06 57.0 115 33.0
arahy.Tifrunner.gnm1.ann1.GJ9DG2 Arachis hypogaea HOM05D000176 ORTHO05D000106 4.7e-06 57.0 160 30.0
arahy.Tifrunner.gnm1.ann1.PKR2V8 Arachis hypogaea HOM05D000176 ORTHO05D000106 4.7e-06 57.0 110 35.5
Ah.12g058160 Amaranthus hybridus HOM05D001371 ORTHO05D001319 6.2e-06 56.6 172 28.5
arahy.Tifrunner.gnm1.ann1.3CVE4A Arachis hypogaea HOM05D000176 ORTHO05D000106 6.2e-06 56.6 113 35.4
arahy.Tifrunner.gnm1.ann1.FKN18P Arachis hypogaea HOM05D000176 ORTHO05D000106 6.2e-06 56.6 145 31.0
arahy.Tifrunner.gnm1.ann1.IBS02P Arachis hypogaea HOM05D000176 ORTHO05D000106 6.2e-06 56.6 158 31.6
arahy.Tifrunner.gnm1.ann1.U0Q0L9 Arachis hypogaea HOM05D000176 ORTHO05D000106 6.2e-06 56.6 140 30.0
CSS0048918 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.2e-06 56.6 224 25.9
arahy.Tifrunner.gnm1.ann1.LSU00A Arachis hypogaea HOM05D000176 ORTHO05D000106 8.1e-06 56.2 180 26.1
Ca_14473_v3 Cicer arietinum L. HOM05D010640 ORTHO05D012663 8.1e-06 56.2 190 30.5
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-06 56.2 161 29.8
QL04p053141 Quercus lobata HOM05D000176 ORTHO05D000106 8.1e-06 56.2 167 31.7
Rhsim02G0127300 Rhododendron simsii HOM05D000176 ORTHO05D000106 8.1e-06 56.2 236 27.1


User provided reference genes

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