Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031396 Daucus carota HOM05D002492 ORTHO05D002621 1.9e-242 842.0 408 100.0
DCAR_017541 Daucus carota HOM05D002492 ORTHO05D002621 5.6e-138 495.0 241 99.2
DCAR_031412 Daucus carota HOM05D002492 ORTHO05D002621 8.0e-108 394.8 392 53.3
DCAR_028507 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-106 390.2 331 57.4
DCAR_031400 Daucus carota HOM05D000106 ORTHO05D002621 4.1e-88 329.3 240 65.0
DCAR_031404 Daucus carota HOM05D002492 ORTHO05D002621 8.6e-86 321.6 240 63.8
DCAR_017540 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-72 277.7 249 63.1
DCAR_028512 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-70 270.0 214 60.7
DCAR_017539 Daucus carota HOM05D002492 ORTHO05D002621 6.0e-63 245.7 173 64.2
DCAR_031397 Daucus carota HOM05D002492 ORTHO05D002621 6.0e-63 245.7 173 64.2
DCAR_028506 Daucus carota HOM05D002492 ORTHO05D002621 3.9e-62 243.0 241 56.8
DCAR_031409 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-61 241.5 171 66.7
DCAR_017537 Daucus carota HOM05D022071 ORTHO05D002621 5.6e-61 239.2 184 61.4
DCAR_031854 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-56 223.4 336 36.9
DCAR_031399 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-47 193.7 234 42.3
DCAR_031408 Daucus carota HOM05D002492 ORTHO05D002621 5.6e-45 186.0 234 40.6
DCAR_028510 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-39 167.9 171 48.0
DCAR_005612 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-38 164.9 234 38.9
DCAR_031407 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-38 164.1 210 40.0
DCAR_017018 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-38 163.7 237 36.3
DCAR_031398 Daucus carota HOM05D002492 ORTHO05D002621 3.9e-38 163.3 236 38.6
DCAR_031411 Daucus carota HOM05D002492 ORTHO05D002621 8.7e-38 162.2 236 38.1
DCAR_010634 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-37 161.8 231 39.0
DCAR_024224 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-37 161.4 234 36.3
DCAR_011193 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-35 155.2 297 31.3
DCAR_027466 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-35 155.2 203 38.9
DCAR_017278 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-35 154.8 234 36.3
DCAR_028491 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-35 154.8 240 35.0
DCAR_010474 Daucus carota HOM05D002492 ORTHO05D002621 4.0e-35 153.3 237 36.3
DCAR_031855 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-34 151.8 233 36.1
DCAR_017468 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-34 151.4 234 36.3
DCAR_024285 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-34 149.8 234 34.6
DCAR_020330 Daucus carota HOM05D002492 ORTHO05D002621 7.6e-34 149.1 226 36.7
DCAR_002614 Daucus carota HOM05D002492 ORTHO05D002621 4.9e-33 146.4 234 34.6
DCAR_031642 Daucus carota HOM05D002492 ORTHO05D002621 6.4e-33 146.0 234 33.8
DCAR_017879 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-32 144.8 234 32.1
DCAR_001053 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-32 144.1 234 34.6
DCAR_010630 Daucus carota HOM05D002492 ORTHO05D002621 7.1e-32 142.5 234 35.5
DCAR_029452 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-30 137.1 225 36.9
DCAR_018000 Daucus carota HOM05D002492 ORTHO05D002621 6.7e-30 136.0 320 28.4
DCAR_021161 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-28 131.7 202 33.2
DCAR_031756 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-27 128.6 208 34.6
DCAR_031757 Daucus carota HOM05D002492 ORTHO05D002621 6.9e-27 125.9 193 36.8
DCAR_011402 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-26 125.2 188 36.7
DCAR_031392 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-26 124.8 238 32.4
DCAR_022677 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-26 124.0 206 33.5
DCAR_017267 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-25 121.3 248 34.7
DCAR_024352 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-25 120.9 155 40.0
DCAR_010411 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-25 120.6 237 26.2
DCAR_017538 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-25 120.6 176 37.5
DCAR_024329 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-25 120.6 228 29.4
DCAR_029614 Daucus carota HOM05D002492 ORTHO05D002621 4.9e-25 119.8 245 31.8
DCAR_002704 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-25 119.4 270 28.9
DCAR_027578 Daucus carota HOM05D002492 ORTHO05D002621 8.4e-25 119.0 225 30.7
DCAR_026108 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-24 118.6 270 28.9
DCAR_010788 Daucus carota HOM05D002492 ORTHO05D002621 2.5e-24 117.5 149 37.6
DCAR_015930 Daucus carota HOM05D002492 ORTHO05D002621 4.2e-24 116.7 166 34.3
DCAR_024354 Daucus carota HOM05D002492 ORTHO05D002621 9.3e-24 115.5 229 31.4
DCAR_027468 Daucus carota HOM05D002492 ORTHO05D002621 3.5e-23 113.6 240 28.3
DCAR_001054 Daucus carota HOM05D002492 ORTHO05D002621 6.0e-23 112.8 235 29.4
DCAR_024328 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-22 112.1 229 29.3
DCAR_030199 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-22 111.3 228 28.5
DCAR_031459 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-22 110.9 233 28.3
DCAR_010867 Daucus carota HOM05D002492 ORTHO05D002621 6.7e-22 109.4 231 29.0
DCAR_017458 Daucus carota HOM05D002492 ORTHO05D002621 8.7e-22 109.0 193 32.6
DCAR_028508 Daucus carota HOM05D002492 ORTHO05D002621 8.7e-22 109.0 127 43.3
DCAR_010812 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-21 108.6 326 26.4
DCAR_023749 Daucus carota HOM05D002492 ORTHO05D002621 1.9e-21 107.8 234 29.1
DCAR_015810 Daucus carota HOM05D002492 ORTHO05D002621 2.5e-21 107.5 149 35.6
DCAR_019328 Daucus carota HOM05D005446 ORTHO05D006597 2.5e-21 107.5 193 32.6
DCAR_020839 Daucus carota HOM05D002492 ORTHO05D002621 3.3e-21 107.1 227 27.8
DCAR_005968 Daucus carota HOM05D002492 ORTHO05D002621 9.6e-21 105.5 223 26.5
DCAR_020287 Daucus carota HOM05D002492 ORTHO05D002621 9.6e-21 105.5 223 26.5
DCAR_004789 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-20 105.1 232 29.7
DCAR_031501 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-20 104.8 231 28.1
DCAR_017878 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-20 104.4 236 27.5
DCAR_028338 Daucus carota HOM05D002492 ORTHO05D002621 3.7e-20 103.6 227 26.9
DCAR_031414 Daucus carota HOM05D002492 ORTHO05D002621 6.2e-20 102.8 172 34.9
DCAR_024355 Daucus carota HOM05D002492 ORTHO05D002621 8.2e-20 102.4 220 27.7
DCAR_028337 Daucus carota HOM05D002492 ORTHO05D002621 8.2e-20 102.4 199 29.1
DCAR_008877 Daucus carota HOM05D002492 ORTHO05D002621 4.1e-19 100.1 224 27.7
DCAR_005544 Daucus carota HOM05D002492 ORTHO05D002621 5.3e-19 99.8 135 37.0
DCAR_030129 Daucus carota HOM05D002492 ORTHO05D002621 9.0e-19 99.0 132 37.1
DCAR_026147 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-18 98.6 220 24.5
DCAR_017737 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-18 98.2 207 28.5
DCAR_005616 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-18 97.4 241 25.3
DCAR_010019 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-18 97.4 225 28.9
DCAR_030130 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-18 97.4 221 28.1
DCAR_031312 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-18 97.4 192 30.2
DCAR_002142 Daucus carota HOM05D002492 ORTHO05D002621 5.8e-18 96.3 282 25.5
DCAR_009800 Daucus carota HOM05D007374 ORTHO05D009283 5.8e-18 96.3 221 28.1
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 7.6e-18 95.9 270 25.2
DCAR_028093 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-17 93.2 225 25.8
DCAR_017482 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-17 92.8 234 29.1
DCAR_003523 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-16 91.7 219 28.3
DCAR_007165 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-16 91.7 187 31.6
DCAR_017280 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-16 91.7 221 25.8
DCAR_030958 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-16 90.5 237 25.7
DCAR_032006 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-16 90.5 218 29.4
DCAR_025600 Daucus carota HOM05D002492 ORTHO05D002621 4.2e-16 90.1 261 26.4
DCAR_024134 Daucus carota HOM05D002492 ORTHO05D002621 5.5e-16 89.7 231 28.6
DCAR_028296 Daucus carota HOM05D002492 ORTHO05D002621 7.1e-16 89.4 244 26.2
DCAR_017735 Daucus carota HOM05D002492 ORTHO05D002621 9.3e-16 89.0 225 24.9
DCAR_001183 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-15 88.6 176 33.5
DCAR_015811 Daucus carota HOM05D002492 ORTHO05D002621 6.1e-15 86.3 232 26.3
DCAR_022741 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-14 85.1 143 33.6
DCAR_013360 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-14 84.0 161 30.4
DCAR_031648 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-14 84.0 238 28.2
DCAR_016057 Daucus carota HOM05D002492 ORTHO05D002621 8.7e-14 82.4 211 27.5
DCAR_018622 Daucus carota HOM05D002492 ORTHO05D002621 8.7e-14 82.4 224 25.4
DCAR_024728 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-13 81.6 245 27.8
DCAR_016062 Daucus carota HOM05D002492 ORTHO05D002621 1.9e-13 81.3 275 24.7
DCAR_017429 Daucus carota HOM05D002492 ORTHO05D002621 2.5e-13 80.9 194 26.3
DCAR_001182 Daucus carota HOM05D002492 ORTHO05D002621 3.3e-13 80.5 144 29.2
DCAR_016042 Daucus carota HOM05D002492 ORTHO05D002621 4.3e-13 80.1 237 24.5
DCAR_022644 Daucus carota HOM05D002492 ORTHO05D002621 7.4e-13 79.3 199 30.2
DCAR_031394 Daucus carota HOM05D002492 ORTHO05D002621 7.4e-13 79.3 196 26.0
DCAR_024102 Daucus carota HOM05D002492 ORTHO05D002621 9.7e-13 79.0 234 25.2
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 2.2e-12 77.8 234 22.6
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 2.2e-12 77.8 234 22.6
Aqoxy3G01099 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 3.7e-12 77.0 229 24.0
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 4.8e-12 76.6 199 27.1
DCAR_029847 Daucus carota HOM05D002492 ORTHO05D002621 8.2e-12 75.9 121 35.5
DCAR_017479 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-11 75.5 228 26.3
DCAR_032155 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-11 75.1 241 23.7
DCAR_021053 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-11 74.7 225 26.7
DCAR_028352 Daucus carota HOM05D000003 ORTHO05D000004 1.8e-11 74.7 163 30.7
DCAR_024921 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-11 74.3 235 26.0
DCAR_026397 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-11 74.3 193 24.4
DCAR_031584 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-11 74.3 128 31.2
TWI53G0769 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.1e-11 73.6 234 22.6
DCAR_016052 Daucus carota HOM05D002492 ORTHO05D002621 5.3e-11 73.2 237 26.2
DCAR_028571 Daucus carota HOM05D002492 ORTHO05D002621 5.3e-11 73.2 159 29.6
C08p32530 Brassica napus HOM05D000353 ORTHO05D000174 6.9e-11 72.8 271 23.2
C05p49080 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-10 72.0 238 24.4
DCAR_009543 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-10 71.6 134 27.6
C07p44760 Brassica napus HOM05D000824 ORTHO05D003555 2.0e-10 71.2 241 24.9
DCAR_029962 Daucus carota HOM05D002492 ORTHO05D002621 3.4e-10 70.5 166 29.5
DCAR_031313 Daucus carota HOM05D002492 ORTHO05D002621 3.4e-10 70.5 188 25.5
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 3.4e-10 70.5 223 23.8
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 4.5e-10 70.1 223 23.8
DCAR_001185 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-10 69.7 150 32.0
BcaC04g23467 Brassica carinata HOM05D000824 ORTHO05D003555 1.0e-09 68.9 241 23.7
C09p08030 Brassica napus HOM05D000824 ORTHO05D003555 1.0e-09 68.9 241 23.7
A09p07190 Brassica napus HOM05D000824 ORTHO05D003555 1.3e-09 68.6 241 23.7
BolC9t53717H Brassica oleracea HOM05D000824 ORTHO05D003555 1.3e-09 68.6 241 23.7
DCAR_031904 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-09 68.6 229 21.4
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 1.7e-09 68.2 223 22.9
DCAR_018623 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-09 67.8 229 21.4
DCAR_031281 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-09 67.8 237 25.3
Lj1g0017581 Lotus japonicus HOM05D000353 ORTHO05D000174 2.2e-09 67.8 234 23.1
vmacro17614 Vaccinium macrocarpon HOM05D000824 ORTHO05D003555 2.2e-09 67.8 241 24.5
DCAR_017251 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-09 67.0 193 25.9
DCAR_010336 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-09 66.6 250 22.0
DCAR_031418 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-09 66.6 238 26.1
RcHm_v2.0_Chr2g0133271 Rosa chinensis HOM05D006849 ORTHO05D003348 5.0e-09 66.6 230 23.9
DCAR_017543 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-08 65.5 135 25.2
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 1.1e-08 65.5 231 23.4
HPP92_014050 Vanilla planifolia HOM05D000824 ORTHO05D003555 1.1e-08 65.5 233 24.9
DCAR_001590 Daucus carota HOM05D011940 ORTHO05D177507 1.4e-08 65.1 106 32.1
DCAR_029815 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-08 65.1 95 31.6
Nitab4.5_0002746g0030 Nicotiana tabacum HOM05D002907 ORTHO05D000065 1.4e-08 65.1 147 30.6
RcHm_v2.0_Chr2g0133331 Rosa chinensis HOM05D006849 ORTHO05D003348 1.4e-08 65.1 201 24.4
BraA09t36368Z Brassica rapa HOM05D000824 ORTHO05D003555 1.9e-08 64.7 241 23.7
DCAR_021272 Daucus carota HOM05D002492 ORTHO05D002621 1.9e-08 64.7 130 26.2
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 3.2e-08 63.9 228 22.8
DCAR_000282 Daucus carota HOM05D002492 ORTHO05D002621 5.5e-08 63.2 112 32.1
DCAR_010410 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-08 62.8 185 25.9
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 7.2e-08 62.8 230 24.3
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 1.6e-07 61.6 216 22.7
DCAR_017690 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-07 61.6 223 22.9
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 2.7e-07 60.8 142 30.3
DCAR_028495 Daucus carota HOM05D002492 ORTHO05D002621 3.6e-07 60.5 108 38.0
Carub.0007s3603 Capsella rubella HOM05D000353 ORTHO05D011313 4.6e-07 60.1 219 26.5
DCAR_031458 Daucus carota HOM05D002492 ORTHO05D002621 6.1e-07 59.7 194 24.2
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 6.1e-07 59.7 138 29.7
TWI81G1098 Tripterygium wilfordii HOM05D000824 ORTHO05D003555 6.1e-07 59.7 230 24.3
C05p49950 Brassica napus HOM05D000353 ORTHO05D000174 7.9e-07 59.3 204 21.1
DCAR_017466 Daucus carota HOM05D002492 ORTHO05D002621 7.9e-07 59.3 157 25.5
QL93p0160_0016 Quercus lobata HOM05D002907 ORTHO05D000065 7.9e-07 59.3 113 26.5
C02p33390 Brassica napus HOM05D000353 ORTHO05D015401 1.0e-06 58.9 229 23.6
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 1.0e-06 58.9 146 30.8
DCAR_010167 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-06 58.2 80 38.8
DCAR_031670 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-06 58.2 252 23.0
Thhalv10029216m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.8e-06 58.2 225 20.9
DCAR_022646 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-06 57.8 131 29.0
DCAR_030539 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-06 57.4 105 30.5
Hma1.2p1_0051F.1_g029450 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 3.9e-06 57.0 207 21.3
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.1e-06 56.6 78 38.5
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 6.7e-06 56.2 230 23.9
Aqoxy3G01805 Aquilegia oxysepala HOM05D020307 ORTHO05D011950 8.8e-06 55.8 175 25.1
DCAR_028299 Daucus carota HOM05D002492 ORTHO05D002621 8.8e-06 55.8 191 27.2


User provided reference genes

Program Settings