Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 1.1e-60 236.5 123 100.0
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 6.7e-42 174.1 122 69.7
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 1.5e-41 172.9 114 73.7
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 3.3e-41 171.8 123 71.5
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 7.4e-41 170.6 121 73.6
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 1.3e-40 169.9 123 67.5
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 1.3e-40 169.9 123 70.7
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 1.6e-40 169.5 123 69.1
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 1.8e-39 166.0 112 73.2
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 2.4e-39 165.6 121 68.6
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 3.1e-39 165.2 123 68.3
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 5.3e-39 164.5 117 68.4
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 6.9e-39 164.1 117 67.5
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 6.9e-39 164.1 124 69.4
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 1.2e-38 163.3 117 68.4
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.2e-38 163.3 117 68.4
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 1.5e-38 162.9 123 64.2
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 1.5e-38 162.9 123 67.5
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 3.4e-38 161.8 123 64.2
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 4.5e-38 161.4 119 67.2
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 7.6e-38 160.6 123 67.5
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 9.9e-38 160.2 123 64.2
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 9.9e-38 160.2 124 63.7
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 1.3e-37 159.8 127 67.7
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 1.3e-37 159.8 123 65.9
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 2.2e-37 159.1 120 68.3
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 2.2e-37 159.1 122 64.8
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 3.8e-37 158.3 123 65.9
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 4.9e-37 157.9 124 67.7
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 4.9e-37 157.9 123 65.9
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 6.4e-37 157.5 123 64.2
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 6.4e-37 157.5 112 69.6
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 1.1e-36 156.8 112 67.9
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 1.1e-36 156.8 125 64.8
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 1.4e-36 156.4 123 67.5
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 1.4e-36 156.4 124 66.9
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 1.4e-36 156.4 124 66.9
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 1.9e-36 156.0 123 63.4
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 1.9e-36 156.0 116 70.7
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 2.4e-36 155.6 123 61.8
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 2.4e-36 155.6 117 65.0
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 3.2e-36 155.2 123 61.8
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 5.5e-36 154.5 124 66.1
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 7.1e-36 154.1 114 68.4
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 1.2e-35 153.3 123 65.9
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 1.6e-35 152.9 114 64.0
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 2.1e-35 152.5 121 62.0
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 2.7e-35 152.1 123 62.6
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 4.6e-35 151.4 123 65.0
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 7.9e-35 150.6 122 63.1
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 7.9e-35 150.6 123 61.8
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 7.9e-35 150.6 123 61.8
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 1.0e-34 150.2 123 65.0
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 1.3e-34 149.8 123 64.2
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 1.3e-34 149.8 117 59.8
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.3e-34 149.1 112 63.4
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.0e-34 148.7 112 63.4
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 5.1e-34 147.9 122 60.7
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 5.1e-34 147.9 115 64.3
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 6.7e-34 147.5 114 67.5
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 8.7e-34 147.1 112 66.1
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 1.5e-33 146.4 122 61.5
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 1.5e-33 146.4 123 60.2
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 1.5e-33 146.4 122 61.5
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 2.5e-33 145.6 122 60.7
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 3.3e-33 145.2 122 61.5
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 1.6e-32 142.9 122 59.0
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 1.6e-32 142.9 122 59.0
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 2.1e-32 142.5 122 59.0
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 2.1e-32 142.5 122 59.0
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 2.8e-32 142.1 113 63.7
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 2.8e-32 142.1 123 61.0
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 4.8e-32 141.4 113 62.8
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 6.2e-32 141.0 119 58.8
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 1.1e-31 140.2 114 61.4
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 3.1e-31 138.7 114 61.4
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 4.0e-31 138.3 147 54.4
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 5.3e-31 137.9 123 59.3
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 6.9e-31 137.5 112 58.9
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 9.0e-31 137.1 121 57.0
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 4.5e-30 134.8 113 63.7
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 1.0e-29 133.7 122 56.6
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 9.3e-28 127.1 123 57.7
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 1.2e-27 126.7 122 54.1
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 6.0e-27 124.4 103 60.2
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 6.0e-27 124.4 103 60.2
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.0e-26 123.6 88 65.9
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 5.3e-23 111.3 95 58.9
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 5.9e-22 107.8 115 52.2
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 3.8e-21 105.1 84 63.1
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 8.5e-21 104.0 107 50.5
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 5.5e-20 101.3 100 52.0
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 3.3e-17 92.0 121 40.5
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 4.1e-15 85.1 61 67.2
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.0e-14 82.8 112 42.9
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 5.9e-14 81.3 65 60.0
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 2.1e-11 72.8 111 39.6
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 1.1e-09 67.0 97 40.2
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.4e-07 60.1 44 65.9


User provided reference genes

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