Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031259 Daucus carota HOM05D011804 ORTHO05D176302 4.3e-56 221.1 111 100.0
DCAR_031260 Daucus carota HOM05D011804 ORTHO05D176314 9.5e-56 219.9 111 99.1
DCAR_031270 Daucus carota HOM05D011804 ORTHO05D176764 9.2e-51 203.4 111 94.6
DCAR_031269 Daucus carota HOM05D011804 ORTHO05D015090 7.4e-32 140.6 172 54.1
DCAR_009534 Daucus carota HOM05D001927 ORTHO05D177657 4.1e-14 81.6 48 85.4
DCAR_027432 Daucus carota HOM05D011804 ORTHO05D015090 8.5e-12 73.9 37 100.0
DCAR_031261 Daucus carota HOM05D011804 ORTHO05D015090 8.5e-12 73.9 37 100.0
DCAR_031983 Daucus carota HOM05D011804 ORTHO05D015090 8.5e-12 73.9 37 100.0
DCAR_031985 Daucus carota HOM05D011804 ORTHO05D015090 8.5e-12 73.9 37 100.0
DCAR_031262 Daucus carota HOM05D011804 ORTHO05D015090 7.2e-11 70.9 37 97.3
Actinidia22908 Actinidia chinensis HOM05D001927 ORTHO05D001972 1.3e-07 60.1 81 48.1
DCAR_027430 Daucus carota HOM05D011804 ORTHO05D015090 1.3e-07 60.1 39 84.6
DCAR_031266 Daucus carota HOM05D011804 ORTHO05D015090 1.3e-07 60.1 39 84.6
MSTRG.2741 Avicennia marina HOM05D001927 ORTHO05D001972 1.7e-07 59.7 84 46.4
Nitab4.5_0000702g0110 Nicotiana tabacum HOM05D001927 ORTHO05D001972 2.2e-07 59.3 87 46.0
CSS0009793 Camellia sinensis var. sinensis HOM05D001927 ORTHO05D001972 8.2e-07 57.4 80 43.8
Cpa.g.sc535.2 Carica papaya HOM05D001927 ORTHO05D001972 8.2e-07 57.4 85 42.4
Duzib187G0987 Durio zibethinus HOM05D001927 ORTHO05D001972 8.2e-07 57.4 85 44.7
Nitab4.5_0006877g0010 Nicotiana tabacum HOM05D001927 ORTHO05D001972 8.2e-07 57.4 89 44.9
Medtr8g073920 Medicago truncatula HOM05D001927 ORTHO05D001972 1.1e-06 57.0 62 48.4
Peaxi162Scf00442g00029 Petunia axillaris HOM05D001927 ORTHO05D001972 1.1e-06 57.0 83 44.6
Actinidia17381 Actinidia chinensis HOM05D001927 ORTHO05D001972 1.4e-06 56.6 46 60.9
CDE02G2418 Ceratophyllum demersum HOM05D001927 ORTHO05D001972 1.4e-06 56.6 46 63.0
CDE04G0090 Ceratophyllum demersum HOM05D001927 ORTHO05D001972 1.4e-06 56.6 46 63.0
MD05G1134300 Malus domestica HOM05D001927 ORTHO05D001972 1.4e-06 56.6 60 51.7
Os10g0542200 Oryza sativa ssp. japonica HOM05D001927 ORTHO05D001972 1.4e-06 56.6 85 43.5
Sed0010207 Sechium edule HOM05D001927 ORTHO05D001972 1.4e-06 56.6 64 51.6
Migut.B00013 Erythranthe guttata HOM05D001927 ORTHO05D001972 1.8e-06 56.2 54 55.6
Nitab4.5_0005297g0060 Nicotiana tabacum HOM05D001927 ORTHO05D001972 1.8e-06 56.2 87 42.5
Solyc02g082800.3 Solanum lycopersicum HOM05D001927 ORTHO05D001972 1.8e-06 56.2 89 43.8
Sopen02g027600 Solanum pennellii HOM05D001927 ORTHO05D001972 1.8e-06 56.2 89 43.8
PGSC0003DMG400001571 Solanum tuberosum HOM05D001927 ORTHO05D001972 1.8e-06 56.2 89 43.8
MELO3C013259.2 Cucumis melo HOM05D001927 ORTHO05D001972 2.4e-06 55.8 90 45.6
CsaV3_7G001800 Cucumis sativus L. HOM05D001927 ORTHO05D001972 2.4e-06 55.8 90 45.6
Migut.H02201 Erythranthe guttata HOM05D001927 ORTHO05D001972 2.4e-06 55.8 47 57.4
MBI05_g12023_MAGBIO Magnolia biondii HOM05D001927 ORTHO05D001972 2.4e-06 55.8 84 46.4
Zm00001eb393840 Zea mays HOM05D001927 ORTHO05D001972 2.4e-06 55.8 84 44.0
Dinv14164 Davidia involucrata HOM05D001927 ORTHO05D001972 3.1e-06 55.5 81 44.4
MD10G1139400 Malus domestica HOM05D001927 ORTHO05D001972 3.1e-06 55.5 85 43.5
Os03g0131300 Oryza sativa ssp. japonica HOM05D001927 ORTHO05D001972 3.1e-06 55.5 60 46.7
Pp3c12_13580 Physcomitrium patens HOM05D001927 ORTHO05D001972 3.1e-06 55.5 90 38.9
Rhsim10G0197500 Rhododendron simsii HOM05D001927 ORTHO05D001972 3.1e-06 55.5 43 65.1
SMO116G0192 Selaginella moellendorffii HOM05D001927 ORTHO05D001972 3.1e-06 55.5 91 45.1
Thecc.01G006700 Theobroma cacao HOM05D001927 ORTHO05D001972 3.1e-06 55.5 84 41.7
MSTRG.19947 Avicennia marina HOM05D001927 ORTHO05D001972 4.1e-06 55.1 58 48.3
Cpa.g.sc20.203 Carica papaya HOM05D001927 ORTHO05D001972 4.1e-06 55.1 90 46.7
COL.COLO4_22541 Corchorus olitorius HOM05D001927 ORTHO05D001972 4.1e-06 55.1 84 41.7
Manes.02G113000 Manihot esculenta HOM05D001927 ORTHO05D001972 4.1e-06 55.1 54 53.7
Cc07_g11700 Coffea canephora HOM05D001927 ORTHO05D001972 5.3e-06 54.7 84 42.9
Oeu021982.1 Olea europaea HOM05D001927 ORTHO05D001972 5.3e-06 54.7 61 47.5
SGA_v2.0_scaffold32G13343 Striga asiatica HOM05D001927 ORTHO05D001972 5.3e-06 54.7 59 50.8
HPP92_002452 Vanilla planifolia HOM05D001927 ORTHO05D001972 5.3e-06 54.7 83 42.2
VMungo0251G2413 Vigna mungo HOM05D001927 ORTHO05D001972 5.3e-06 54.7 44 61.4
CAN.G1159.20 Capsicum annuum HOM05D001927 ORTHO05D001972 6.9e-06 54.3 65 47.7
Glyma.16G118400 Glycine max HOM05D001927 ORTHO05D001972 6.9e-06 54.3 44 59.1
Gohir.A03G209500 Gossypium hirsutum HOM05D001927 ORTHO05D001972 6.9e-06 54.3 43 65.1
Gohir.D02G231200 Gossypium hirsutum HOM05D001927 ORTHO05D001972 6.9e-06 54.3 43 65.1
Gorai.005G258800 Gossypium raimondii HOM05D001927 ORTHO05D001972 6.9e-06 54.3 43 65.1
Lalb_Chr16g0377241 Lupinus albus HOM05D001927 ORTHO05D001972 6.9e-06 54.3 44 61.4
Mapoly0065s0073 Marchantia polymorpha HOM05D001927 ORTHO05D001972 6.9e-06 54.3 99 39.4
Phvul.003G269300 Phaseolus vulgaris HOM05D001927 ORTHO05D001972 6.9e-06 54.3 44 59.1
Prupe.8G178100 Prunus persica HOM05D001927 ORTHO05D001972 6.9e-06 54.3 61 49.2
Sabra04G0138400 Salix brachista HOM05D001927 ORTHO05D001972 6.9e-06 54.3 64 48.4
TWI31G0016 Tripterygium wilfordii HOM05D001927 ORTHO05D001972 6.9e-06 54.3 61 50.8
TWI75G1468 Tripterygium wilfordii HOM05D001927 ORTHO05D001972 6.9e-06 54.3 61 50.8
vmacro20528 Vaccinium macrocarpon HOM05D001927 ORTHO05D001972 6.9e-06 54.3 43 62.8
Zm00001eb022400 Zea mays HOM05D001927 ORTHO05D001972 6.9e-06 54.3 84 41.7
arahy.Tifrunner.gnm1.ann1.IUYP8I Arachis hypogaea HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
arahy.Tifrunner.gnm1.ann1.P0RRHQ Arachis hypogaea HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
Ca_22419_v3 Cicer arietinum L. HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
Ca_24968_v3 Cicer arietinum L. HOM05D001927 ORTHO05D001972 9.1e-06 53.9 82 41.5
ClCG02G003510 Citrullus lanatus HOM05D001927 ORTHO05D001972 9.1e-06 53.9 91 45.1
DCAR_015664 Daucus carota HOM05D001927 ORTHO05D001972 9.1e-06 53.9 46 60.9
Glyma.01G159500 Glycine max HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
Glyma.11G084700 Glycine max HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
Lj9A406G55 Lonicera japonica HOM05D001927 ORTHO05D001972 9.1e-06 53.9 46 60.9
Lj2g0024598 Lotus japonicus HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
Lalb_Chr05g0211891 Lupinus albus HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
Oeu010279.1 Olea europaea HOM05D001927 ORTHO05D001972 9.1e-06 53.9 46 60.9
Phvul.002G115300 Phaseolus vulgaris HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
Psat0s943g0080 Pisum sativum HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
Psat4g104080 Pisum sativum HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
Sabra09G0129800 Salix brachista HOM05D001927 ORTHO05D001972 9.1e-06 53.9 55 52.7
TPR.G25116 Trifolium pratense HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1
VMungo1215G1850 Vigna mungo HOM05D001927 ORTHO05D001972 9.1e-06 53.9 44 59.1


User provided reference genes

Program Settings