Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031239 Daucus carota HOM05D002492 ORTHO05D002621 4.4e-144 514.6 259 100.0
DCAR_031281 Daucus carota HOM05D002492 ORTHO05D002621 5.6e-67 258.5 180 68.9
DCAR_016052 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-65 253.1 180 67.2
DCAR_014850 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-57 227.3 180 57.2
DCAR_024921 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-50 204.1 177 57.6
DCAR_020954 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-39 166.4 181 43.6
DCAR_018168 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-39 165.6 181 42.5
DCAR_024727 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-39 165.6 181 43.6
DCAR_010813 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-38 164.1 181 43.1
DCAR_030141 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-38 164.1 181 42.0
DCAR_010167 Daucus carota HOM05D002492 ORTHO05D002621 5.5e-38 162.2 182 42.3
DCAR_028351 Daucus carota HOM05D002492 ORTHO05D002621 5.5e-38 162.2 180 42.2
DCAR_029961 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-38 161.8 182 41.2
DCAR_001527 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-36 156.8 146 53.4
DCAR_024134 Daucus carota HOM05D002492 ORTHO05D002621 6.7e-36 155.2 180 42.8
DCAR_025344 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-33 147.1 168 41.7
DCAR_024381 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-33 146.4 181 39.8
DCAR_031670 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-32 143.7 176 39.8
DCAR_005243 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-32 142.1 168 39.9
DCAR_016811 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-31 138.7 178 43.8
DCAR_031651 Daucus carota HOM05D002492 ORTHO05D002621 8.3e-26 121.7 96 63.5
DCAR_010812 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-24 117.9 192 33.3
DCAR_024728 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-23 114.0 180 36.7
DCAR_001182 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-23 113.2 184 32.1
DCAR_029962 Daucus carota HOM05D002492 ORTHO05D002621 8.5e-23 111.7 184 35.3
DCAR_016062 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-22 111.3 180 35.6
DCAR_028352 Daucus carota HOM05D000003 ORTHO05D000004 9.4e-22 108.2 186 34.4
DCAR_016061 Daucus carota HOM05D002492 ORTHO05D002621 6.1e-21 105.5 178 32.6
DCAR_002003 Daucus carota HOM05D000798 ORTHO05D002621 8.0e-21 105.1 178 38.2
DCAR_024736 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-20 104.0 186 33.3
DCAR_015233 Daucus carota HOM05D002492 ORTHO05D002621 6.8e-20 102.1 189 31.2
DCAR_000918 Daucus carota HOM05D002492 ORTHO05D002621 3.4e-19 99.8 171 35.7
DCAR_010336 Daucus carota HOM05D002492 ORTHO05D002621 3.4e-19 99.8 181 34.3
DCAR_028586 Daucus carota HOM05D002492 ORTHO05D002621 4.4e-19 99.4 171 36.3
DCAR_022394 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-17 94.7 183 31.1
DCAR_028297 Daucus carota HOM05D002492 ORTHO05D002621 9.1e-17 91.7 225 28.4
DCAR_022646 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-16 90.9 148 33.8
DCAR_001185 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-16 90.5 146 33.6
DCAR_028727 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-16 90.5 172 32.6
DCAR_001724 Daucus carota HOM05D002492 ORTHO05D002621 7.7e-16 88.6 177 36.2
DCAR_024328 Daucus carota HOM05D002492 ORTHO05D002621 7.7e-16 88.6 182 32.4
DCAR_009543 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-15 87.8 127 33.1
Nitab4.5_0001245g0050 Nicotiana tabacum HOM05D002907 ORTHO05D000065 5.0e-15 85.9 121 40.5
DCAR_016054 Daucus carota HOM05D002492 ORTHO05D002621 6.6e-15 85.5 177 31.6
DCAR_031279 Daucus carota HOM05D002492 ORTHO05D002621 6.6e-15 85.5 143 37.1
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 8.6e-15 85.1 121 38.0
DCAR_017314 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-14 84.3 105 41.9
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 1.9e-14 84.0 121 38.0
DCAR_028299 Daucus carota HOM05D002492 ORTHO05D002621 3.3e-14 83.2 129 34.9
Peaxi162Scf00115g00007 Petunia axillaris HOM05D002907 ORTHO05D000065 3.3e-14 83.2 121 38.8
DCAR_005840 Daucus carota HOM05D002492 ORTHO05D002621 4.2e-14 82.8 180 30.6
DCAR_002704 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-14 82.0 176 30.1
DCAR_016057 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-14 82.0 180 30.0
DCAR_026108 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-14 82.0 176 30.1
DCAR_017479 Daucus carota HOM05D002492 ORTHO05D002621 9.5e-14 81.6 139 35.3
DCAR_001183 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-13 80.9 194 30.4
DCAR_010411 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-13 80.5 179 30.7
DCAR_028491 Daucus carota HOM05D002492 ORTHO05D002621 3.6e-13 79.7 178 32.0
DCAR_024354 Daucus carota HOM05D002492 ORTHO05D002621 4.7e-13 79.3 211 28.9
DCAR_031648 Daucus carota HOM05D002492 ORTHO05D002621 8.0e-13 78.6 177 29.9
DCAR_031884 Daucus carota HOM05D002492 ORTHO05D002621 8.0e-13 78.6 69 55.1
DCAR_002614 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-12 78.2 183 31.1
DCAR_024285 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-12 77.8 183 30.6
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 1.4e-12 77.8 122 32.8
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 1.4e-12 77.8 122 32.8
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 1.4e-12 77.8 116 36.2
Peaxi162Scf00715g00062 Petunia axillaris HOM05D002907 ORTHO05D000065 1.4e-12 77.8 122 32.8
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 1.8e-12 77.4 174 32.2
DCAR_031501 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-12 77.0 178 29.8
DCAR_018622 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-12 76.6 200 28.0
DCAR_022741 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-12 76.6 182 31.3
DCAR_031459 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-12 76.6 180 29.4
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.0e-12 76.3 135 35.6
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.0e-12 76.3 124 33.9
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 4.0e-12 76.3 121 36.4
DCAR_004789 Daucus carota HOM05D002492 ORTHO05D002621 5.2e-12 75.9 182 28.6
DCAR_017280 Daucus carota HOM05D002492 ORTHO05D002621 6.8e-12 75.5 177 28.2
DCAR_031855 Daucus carota HOM05D002492 ORTHO05D002621 6.8e-12 75.5 178 31.5
Nitab4.5_0002746g0030 Nicotiana tabacum HOM05D002907 ORTHO05D000065 6.8e-12 75.5 124 33.1
DCAR_031431 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-11 74.7 193 29.5
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 1.2e-11 74.7 121 35.5
DCAR_013360 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-11 74.3 184 27.7
DCAR_008877 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-11 73.9 178 27.0
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 3.4e-11 73.2 109 37.6
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 4.4e-11 72.8 126 30.2
DCAR_002142 Daucus carota HOM05D002492 ORTHO05D002621 5.7e-11 72.4 178 27.0
DCAR_015930 Daucus carota HOM05D002492 ORTHO05D002621 5.7e-11 72.4 177 27.1
DCAR_017737 Daucus carota HOM05D002492 ORTHO05D002621 5.7e-11 72.4 169 29.6
DCAR_030130 Daucus carota HOM05D002492 ORTHO05D002621 5.7e-11 72.4 177 27.1
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 5.7e-11 72.4 124 32.3
DCAR_001054 Daucus carota HOM05D002492 ORTHO05D002621 7.5e-11 72.0 167 29.3
DCAR_005968 Daucus carota HOM05D002492 ORTHO05D002621 7.5e-11 72.0 177 30.5
DCAR_020287 Daucus carota HOM05D002492 ORTHO05D002621 7.5e-11 72.0 177 30.5
DCAR_026147 Daucus carota HOM05D002492 ORTHO05D002621 7.5e-11 72.0 177 30.5
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 7.5e-11 72.0 159 30.2
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 7.5e-11 72.0 156 28.8
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 9.8e-11 71.6 129 30.2
DCAR_032006 Daucus carota HOM05D002492 ORTHO05D002621 9.8e-11 71.6 177 29.4
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 9.8e-11 71.6 124 31.5
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 9.8e-11 71.6 124 31.5
DCAR_025600 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-10 71.2 180 27.8
Nitab4.5_0001916g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.3e-10 71.2 102 38.2
Solyc11g032020.1 Solanum lycopersicum HOM05D002907 ORTHO05D000065 1.3e-10 71.2 131 32.1
DCAR_029815 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-10 70.5 216 31.0
DCAR_031642 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-10 70.5 125 32.0
CANSAT64G0304 Cannabis sativa HOM05D002907 ORTHO05D000065 2.8e-10 70.1 134 31.3
DCAR_024355 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-10 70.1 197 27.9
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 2.8e-10 70.1 120 32.5
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.8e-10 70.1 124 31.5
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 3.7e-10 69.7 162 31.5
CANSAT78G0666 Cannabis sativa HOM05D002907 ORTHO05D005554 3.7e-10 69.7 134 31.3
DCAR_024329 Daucus carota HOM05D002492 ORTHO05D002621 3.7e-10 69.7 185 28.6
DCAR_031584 Daucus carota HOM05D002492 ORTHO05D002621 3.7e-10 69.7 133 30.8
DCAR_009800 Daucus carota HOM05D007374 ORTHO05D009283 4.9e-10 69.3 177 25.4
DCAR_030199 Daucus carota HOM05D002492 ORTHO05D002621 8.3e-10 68.6 163 29.4
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.1e-09 68.2 124 32.3
DCAR_010020 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-09 67.8 178 26.4
Sopen08g012630 Solanum pennellii HOM05D000096 ORTHO05D000045 1.4e-09 67.8 166 29.5
DCAR_010019 Daucus carota HOM05D002492 ORTHO05D002621 4.1e-09 66.2 161 29.8
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.1e-09 66.2 170 30.6
DCAR_028296 Daucus carota HOM05D002492 ORTHO05D002621 5.4e-09 65.9 151 29.1
DCAR_028309 Daucus carota HOM05D002492 ORTHO05D002621 5.4e-09 65.9 137 29.2
DCAR_016042 Daucus carota HOM05D002492 ORTHO05D002621 7.0e-09 65.5 180 25.6
DCAR_015761 Daucus carota HOM05D002492 ORTHO05D002621 9.2e-09 65.1 166 31.9
DCAR_027466 Daucus carota HOM05D002492 ORTHO05D002621 9.2e-09 65.1 178 28.1
Nitab4.5_0000242g0060 Nicotiana tabacum HOM05D002907 ORTHO05D000065 9.2e-09 65.1 118 31.4
TWI63G0188 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 9.2e-09 65.1 125 27.2
DCAR_028123 Daucus carota HOM05D001107 ORTHO05D001095 1.2e-08 64.7 80 38.8
DCAR_003523 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-08 64.3 161 29.8
DCAR_025599 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-08 64.3 181 31.5
DCAR_031414 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-08 64.3 219 26.9
DCAR_028338 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-08 63.9 178 24.7
PSO210G5014 Papaver somniferum HOM05D002907 ORTHO05D013727 2.7e-08 63.5 173 27.7
Solyc02g055533.1 Solanum lycopersicum HOM05D003235 ORTHO05D003863 2.7e-08 63.5 104 31.7
DCAR_010867 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-08 62.8 175 27.4
DCAR_028571 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-08 62.8 189 28.6
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 4.5e-08 62.8 137 29.9
Os07g0190600 Oryza sativa ssp. japonica HOM05D008312 ORTHO05D007430 5.9e-08 62.4 130 30.8
DCAR_010634 Daucus carota HOM05D002492 ORTHO05D002621 7.8e-08 62.0 203 26.6
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 7.8e-08 62.0 178 24.7
TWI53G0762 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 2.3e-07 60.5 171 21.6
BcaC08g45255 Brassica carinata HOM05D000353 ORTHO05D000174 2.9e-07 60.1 106 31.1
DCAR_000282 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-07 60.1 95 40.0
DCAR_005616 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-07 60.1 166 30.1
Lj1g0017581 Lotus japonicus HOM05D000353 ORTHO05D000174 2.9e-07 60.1 139 28.1
DCAR_024352 Daucus carota HOM05D002492 ORTHO05D002621 3.9e-07 59.7 152 30.3
Lj4g0003450 Lotus japonicus HOM05D002907 ORTHO05D010433 3.9e-07 59.7 126 31.0
TAR629G1891 Trochodendron aralioides HOM05D000824 ORTHO05D000065 3.9e-07 59.7 166 25.3
C04p16570 Brassica napus HOM05D000353 ORTHO05D000174 5.0e-07 59.3 163 27.6
C06p22080 Brassica napus HOM05D000353 ORTHO05D000174 5.0e-07 59.3 106 32.1
BolC2t08345H Brassica oleracea HOM05D000353 ORTHO05D000174 5.0e-07 59.3 163 27.6
BolC6t37395H Brassica oleracea HOM05D000353 ORTHO05D000174 5.0e-07 59.3 106 32.1
BolC7t45258H Brassica oleracea HOM05D000353 ORTHO05D000174 5.0e-07 59.3 163 27.6
Medtr8g059025 Medicago truncatula HOM05D000353 ORTHO05D000174 5.0e-07 59.3 131 29.0
A10p31040 Brassica napus HOM05D000353 ORTHO05D000174 6.6e-07 58.9 163 27.6
DCAR_019746 Daucus carota HOM05D020096 ORTHO05D014614 6.6e-07 58.9 137 30.7
DCAR_019762 Daucus carota HOM05D020096 ORTHO05D014614 6.6e-07 58.9 137 30.7
DCAR_019770 Daucus carota HOM05D020096 ORTHO05D014614 6.6e-07 58.9 137 30.7
TAR063G0004 Trochodendron aralioides HOM05D000824 ORTHO05D010357 6.6e-07 58.9 135 26.7
TAR091G0002 Trochodendron aralioides HOM05D000824 ORTHO05D000001 6.6e-07 58.9 135 26.7
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.6e-07 58.5 127 26.8
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.6e-07 58.5 103 30.1
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 1.1e-06 58.2 137 29.2
DCAR_028507 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-06 58.2 177 30.5
C05p33950 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-06 57.8 163 27.0
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 1.5e-06 57.8 178 27.5
Nitab4.5_0006891g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.5e-06 57.8 149 26.2
AT2G05642 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 1.9e-06 57.4 108 29.6
BraA09t40037Z Brassica rapa HOM05D000313 ORTHO05D000065 1.9e-06 57.4 218 26.1
Thhalv10029167m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.9e-06 57.4 130 29.2
Psat4g010000 Pisum sativum HOM05D002090 ORTHO05D001923 2.5e-06 57.0 128 26.6
Thhalv10002301m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.3e-06 56.6 130 28.5
arahy.Tifrunner.gnm1.ann1.J3IYG2 Arachis hypogaea HOM05D000353 ORTHO05D008317 4.3e-06 56.2 134 29.9
A09p20060 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-06 56.2 143 26.6
DCAR_017018 Daucus carota HOM05D002492 ORTHO05D002621 4.3e-06 56.2 202 24.8
DCAR_031400 Daucus carota HOM05D000106 ORTHO05D002621 4.3e-06 56.2 171 26.3
TPR.G7703 Trifolium pratense HOM05D000353 ORTHO05D000174 4.3e-06 56.2 110 32.7
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.6e-06 55.8 129 27.1
TWI53G0107 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 5.6e-06 55.8 196 24.5
BraA05t22072Z Brassica rapa HOM05D000353 ORTHO05D000174 7.3e-06 55.5 151 25.8
Thhalv10028142m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.3e-06 55.5 130 28.5
Thhalv10029348m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.3e-06 55.5 130 28.5
C05p54270 Brassica napus HOM05D000353 ORTHO05D000174 9.5e-06 55.1 206 21.8
CANSAT01G3295 Cannabis sativa HOM05D002907 ORTHO05D005554 9.5e-06 55.1 95 33.7
DCAR_018000 Daucus carota HOM05D002492 ORTHO05D002621 9.5e-06 55.1 128 28.1


User provided reference genes

Program Settings