Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 1.2e-48 196.1 92 100.0
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.2e-40 169.5 87 82.8
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 2.1e-40 168.7 91 81.3
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 2.1e-40 168.7 87 83.9
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 2.7e-40 168.3 91 79.1
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 2.7e-40 168.3 89 83.1
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.7e-40 168.3 87 82.8
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.7e-40 168.3 87 82.8
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.7e-40 168.3 87 82.8
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.8e-39 165.6 91 79.1
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 1.8e-39 165.6 91 79.1
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 3.0e-39 164.9 90 80.0
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 5.2e-39 164.1 90 78.9
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 6.7e-39 163.7 87 81.6
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 8.8e-39 163.3 89 78.7
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 1.1e-38 162.9 88 77.3
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 1.1e-38 162.9 91 76.9
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 1.1e-38 162.9 91 75.8
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.1e-38 162.9 90 76.7
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 2.6e-38 161.8 89 78.7
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 2.6e-38 161.8 91 76.9
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 2.6e-38 161.8 85 82.4
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 2.6e-38 161.8 90 75.6
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 2.6e-38 161.8 85 78.8
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 2.6e-38 161.8 89 79.8
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 2.6e-38 161.8 88 79.5
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 3.3e-38 161.4 84 83.3
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 3.3e-38 161.4 90 76.7
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 3.3e-38 161.4 84 83.3
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 3.3e-38 161.4 83 86.7
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.3e-38 161.4 83 86.7
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.3e-38 161.4 83 86.7
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.3e-38 161.4 83 86.7
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 3.3e-38 161.4 91 76.9
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 5.7e-38 160.6 91 74.7
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 7.4e-38 160.2 91 75.8
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 7.4e-38 160.2 89 75.3
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 9.7e-38 159.8 87 79.3
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 9.7e-38 159.8 89 77.5
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 1.7e-37 159.1 86 77.9
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 1.7e-37 159.1 84 82.1
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 2.2e-37 158.7 87 77.0
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 2.8e-37 158.3 89 76.4
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 2.8e-37 158.3 84 82.1
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 3.7e-37 157.9 90 75.6
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 4.8e-37 157.5 86 77.9
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 4.8e-37 157.5 84 81.0
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 6.3e-37 157.1 91 74.7
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 6.3e-37 157.1 90 76.7
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 6.3e-37 157.1 84 81.0
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 6.3e-37 157.1 87 77.0
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 6.3e-37 157.1 86 76.7
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 8.2e-37 156.8 91 73.6
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 8.2e-37 156.8 90 76.7
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 8.2e-37 156.8 91 74.7
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 1.1e-36 156.4 84 79.8
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 1.4e-36 156.0 87 74.7
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 1.4e-36 156.0 87 75.9
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 1.4e-36 156.0 92 76.1
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.8e-36 155.6 79 87.3
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 1.8e-36 155.6 91 75.8
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 1.8e-36 155.6 87 74.7
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 2.4e-36 155.2 89 75.3
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 3.1e-36 154.8 89 75.3
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 3.1e-36 154.8 91 74.7
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 3.1e-36 154.8 84 77.4
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 3.1e-36 154.8 86 77.9
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 4.1e-36 154.5 91 72.5
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 4.1e-36 154.5 91 73.6
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 5.3e-36 154.1 87 77.0
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 5.3e-36 154.1 87 77.0
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 7.0e-36 153.7 87 75.9
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 7.0e-36 153.7 91 74.7
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 9.1e-36 153.3 87 75.9
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 1.2e-35 152.9 91 74.7
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 1.2e-35 152.9 91 74.7
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 1.2e-35 152.9 91 74.7
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 1.2e-35 152.9 91 74.7
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 1.2e-35 152.9 91 74.7
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 1.2e-35 152.9 90 75.6
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 2.0e-35 152.1 86 77.9
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 2.0e-35 152.1 84 75.0
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 2.6e-35 151.8 91 73.6
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 3.5e-35 151.4 92 73.9
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 3.5e-35 151.4 92 73.9
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 3.5e-35 151.4 92 73.9
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 3.5e-35 151.4 92 73.9
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 3.5e-35 151.4 84 78.6
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 4.5e-35 151.0 86 76.7
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 4.5e-35 151.0 86 76.7
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 7.7e-35 150.2 89 75.3
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 7.7e-35 150.2 85 77.6
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 7.7e-35 150.2 86 76.7
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 1.0e-34 149.8 83 74.7
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 1.0e-34 149.8 83 79.5
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 1.0e-34 149.8 83 79.5
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.3e-34 149.4 87 71.3
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.3e-34 149.4 87 71.3
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 2.2e-34 148.7 83 75.9
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 2.9e-34 148.3 81 79.0
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 1.5e-33 146.0 83 74.7
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 2.7e-32 141.7 84 71.4
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 3.6e-32 141.4 86 72.1
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 8.0e-32 140.2 87 72.4
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 6.7e-31 137.1 78 75.6
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 8.8e-31 136.7 91 68.1
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 8.8e-31 136.7 88 64.8
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 1.2e-30 136.3 91 68.1
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 2.6e-30 135.2 69 81.2
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 1.3e-29 132.9 89 65.2
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 1.7e-29 132.5 89 65.2
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 4.8e-29 131.0 70 78.6
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 7.7e-27 123.6 84 65.5
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 5.0e-26 120.9 84 65.5
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 5.0e-26 120.9 84 65.5
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 7.2e-25 117.1 84 60.7
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 3.4e-22 108.2 88 51.1
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.7e-22 107.5 70 68.6
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.7e-22 107.5 70 68.6
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 4.8e-21 104.4 59 72.9
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 7.0e-20 100.5 78 56.4
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 7.0e-20 100.5 89 47.2
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 1.2e-16 89.7 78 48.7
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 3.4e-14 81.6 85 40.0
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 9.8e-14 80.1 42 73.8
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 5.6e-09 64.3 41 73.2
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 9.5e-09 63.5 84 44.0
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 1.4e-07 59.7 56 46.4


User provided reference genes

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