Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 2.1e-166 589.0 304 100.0
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 5.8e-63 245.4 306 50.0
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 2.4e-56 223.4 289 51.2
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 1.8e-51 207.2 318 43.4
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 5.1e-51 205.7 311 42.8
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 7.4e-50 201.8 297 44.4
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 3.7e-49 199.5 295 43.4
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 3.7e-49 199.5 291 44.3
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 6.9e-48 195.3 298 41.9
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 1.5e-47 194.1 290 44.5
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 2.0e-47 193.7 295 41.7
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 2.6e-47 193.4 305 44.3
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 4.5e-47 192.6 292 44.5
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 4.5e-47 192.6 295 42.7
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 2.2e-46 190.3 298 39.9
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 3.8e-46 189.5 295 42.4
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 4.9e-46 189.1 281 46.3
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 6.5e-46 188.7 295 40.0
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 1.1e-45 188.0 289 44.6
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 2.5e-45 186.8 286 40.6
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 3.2e-45 186.4 280 43.6
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 5.5e-45 185.7 314 41.4
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 2.1e-44 183.7 309 40.8
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 2.7e-44 183.3 286 42.0
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 3.5e-44 183.0 300 42.0
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 4.6e-44 182.6 319 41.1
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 5.1e-43 179.1 286 41.6
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 1.5e-42 177.6 323 39.9
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 1.5e-42 177.6 284 43.7
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 1.9e-42 177.2 323 39.0
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 3.3e-42 176.4 289 41.9
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 2.1e-41 173.7 306 39.9
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 9.0e-40 168.3 270 43.3
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 2.0e-39 167.2 351 36.5
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 2.6e-39 166.8 275 38.5
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 3.4e-39 166.4 274 42.7
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.0e-38 164.9 284 39.8
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 2.2e-38 163.7 330 36.7
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 2.9e-38 163.3 284 37.7
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 8.4e-38 161.8 308 37.0
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 1.4e-37 161.0 290 42.1
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 1.4e-37 161.0 268 41.8
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 1.9e-37 160.6 331 37.5
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 9.3e-37 158.3 334 37.1
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.6e-36 157.5 331 37.5
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.6e-36 157.5 331 37.5
DCAR_005656 Daucus carota HOM05D006585 ORTHO05D007798 1.0e-35 154.8 79 96.2
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 3.0e-35 153.3 277 39.0
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 8.7e-35 151.8 317 34.7
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 2.5e-34 150.2 284 40.5
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 2.5e-34 150.2 253 36.4
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 4.3e-34 149.4 333 36.6
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 5.7e-34 149.1 283 38.9
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 9.7e-34 148.3 271 39.1
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 1.6e-33 147.5 302 38.1
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 2.2e-33 147.1 302 36.8
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 8.2e-33 145.2 283 38.9
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 1.8e-32 144.1 299 37.5
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 2.4e-32 143.7 315 34.9
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 3.1e-32 143.3 271 39.5
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 9.0e-32 141.7 357 34.5
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 9.0e-32 141.7 266 39.8
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 7.7e-31 138.7 362 32.6
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 7.7e-31 138.7 288 38.5
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 3.2e-29 133.3 281 37.4
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 4.2e-29 132.9 283 37.1
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 7.2e-29 132.1 362 32.3
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 1.2e-28 131.3 324 37.0
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 4.6e-28 129.4 342 33.0
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 1.4e-27 127.9 324 35.5
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 2.3e-27 127.1 280 34.3
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 3.0e-27 126.7 273 36.6
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 6.7e-27 125.6 213 40.4
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 3.3e-26 123.2 329 33.4
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 4.3e-26 122.9 289 34.3
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 4.8e-25 119.4 293 37.5
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.8e-25 119.4 145 48.3
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 1.1e-24 118.2 360 28.9
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 3.1e-24 116.7 286 34.6
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 5.9e-23 112.5 391 29.9
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 5.9e-23 112.5 170 43.5
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.0e-22 111.7 249 34.5
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 2.9e-22 110.2 227 38.8
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 3.8e-22 109.8 286 31.8
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 1.9e-21 107.5 131 48.9
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 2.5e-21 107.1 423 27.4
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 5.5e-21 105.9 380 27.6
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 5.5e-21 105.9 218 39.0
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 1.2e-20 104.8 345 30.1
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 7.9e-20 102.1 91 54.9
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 6.7e-19 99.0 398 27.9
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 8.8e-19 98.6 234 35.5
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 1.1e-18 98.2 172 40.7
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 2.0e-18 97.4 411 28.5
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 1.1e-16 91.7 108 49.1
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 3.1e-16 90.1 351 27.9
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 2.6e-15 87.0 434 24.0
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 2.6e-15 87.0 108 47.2
Oeu056719.1 Olea europaea HOM05D006585 ORTHO05D007798 5.9e-15 85.9 168 39.3
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 2.9e-14 83.6 285 29.8
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 3.8e-14 83.2 395 26.6
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 8.5e-14 82.0 143 35.7
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 2.5e-13 80.5 147 37.4
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 3.2e-13 80.1 136 36.8
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 3.7e-09 66.6 46 58.7
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 1.4e-08 64.7 113 32.7
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 2.4e-08 63.9 113 36.3
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 1.0e-06 58.5 317 27.1
HPP92_008334 Vanilla planifolia HOM05D034240 ORTHO05D007798 5.0e-06 56.2 195 28.7
SalBow8G2270 Salvia bowleyana HOM05D006585 ORTHO05D007798 6.5e-06 55.8 192 29.2
AUR62008166 Chenopodium quinoa HOM05D000060 ORTHO05D000082 8.5e-06 55.5 64 48.4


User provided reference genes

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